Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0349900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:10587298:10587959:-1 gene:Os10g0349900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 12 description:Similar to NT16 polypeptide. (Os10t0349900-01)
Sequence	ATGGCTTCCAACAAGATCGCTCCCCTTCTTGCCCTGACCCTCCTGATCCTGTTCTTCGGG TGTGCAGTAACTAACTGCACCGGCAAGCCAGTTGCCCCGACGCCGCCGTCGCACGACGAT CACGGCCGCTGCCCGATCGACGCCCTGAAGCTGAGGGTGTGCGCCAACCTGCTCAACGGG CTGATCGGTGTGAAGATTGGGCGCGGCCCAGACGATTGCTGCCCGCTGCTGGCCGGTATC GCCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCTCTGAAGGCTAACGTGCTCGGCCTC ATCAACCTCAACCTGCCCGTCGACCTCAGCATCATCCTCAACAAGTGCGGCAAGAACTAC CCGTCCGGTTTCACCTGCTAA

Peptide Sequence

PEP ID	Os10t0349900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:10587298:10587959:-1 gene:Os10g0349900 transcript:Os10t0349900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 12 description:Similar to NT16 polypeptide. (Os10t0349900-01)
Sequence	MASNKIAPLLALTLLILFFGCAVTNCTGKPVAPTPPSHDDHGRCPIDALKLRVCANLLNG LIGVKIGRGPDDCCPLLAGIADLDAAVCLCTALKANVLGLINLNLPVDLSIILNKCGKNY PSGFTC

Transcript Sequence

Transcript ID	Os10t0349900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:10587298:10587959:-1 gene:Os10g0349900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 12 description:Similar to NT16 polypeptide. (Os10t0349900-01)
Sequence	ACTGTCTACTCCACTAGCTAGCACCATTACTAGCTTAGCTAGATCACTTCACCACTTGAG CAATGGCTTCCAACAAGATCGCTCCCCTTCTTGCCCTGACCCTCCTGATCCTGTTCTTCG GGTGTGCAGTAACTAACTGCACCGGCAAGCCAGTTGCCCCGACGCCGCCGTCGCACGACG ATCACGGCCGCTGCCCGATCGACGCCCTGAAGCTGAGGGTGTGCGCCAACCTGCTCAACG GGCTGATCGGTGTGAAGATTGGGCGCGGCCCAGACGATTGCTGCCCGCTGCTGGCCGGTA TCGCCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCTCTGAAGGCTAACGTGCTCGGCC TCATCAACCTCAACCTGCCCGTCGACCTCAGCATCATCCTCAACAAGTGCGGCAAGAACT ACCCGTCCGGTTTCACCTGCTAATTATTTGAGCTGCAACAATATTCACTAGAGTTTATGT GTCTCAATAAGACGAGTTTAGTTTCGTGCAATGTCTGTCTGTTGACGCTGTTGAGTTGAA TAAGCGTCTCGCGTCTGTTTGCAGGCAGTACTCGATCGATGTATGTCCAGTTCTACCGTC CTTGACCACCTGGTTATTCTAACTTGTAATACCCATCTTATATATATTAGATCGTTTTTA TC