Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0346600-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:10411380:10418438:-1 gene:Os10g0346600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor 4 precursor (AtVSR4) (Epidermal growth factor receptor-like protein 2b) (AtELP2b) (BP80-like protein a) (AtBP80a). (Os10t0346600-00)
Sequence	ATGCGGGGGCCGGCGGGGCTGCCGCTGCCGCTGGTGGTGGCGGTGGCGCTCGCCGCGGCG GCGGTGATGGTGGTGGAGGCGCGGTTCGTGGTGGAGAAGAACAGCCTGATGGTGACGTCG CCGACGTCGCTGCGGGGGAGGCACGACAGCGCCATCGGCAACTTCGGCGTCCCGCAGTAC GGCGGGAGCATGGCCGGCACCGTCGTGTACCCCAAGGACAACGCCGACGCCTGCGAAGCC TACGACGGGGACCGCCACTTCCGCGCCAAGCCCGGCGCGCTCCCCAACTTCCTCCTCATC GACCGCGGAAATTGCCTATTTGCTAAGAAGGTTTGGAATGCGCAAAATGCTGGTGCCTCA GCGGTCCTTGTGGTTGATGACAAGGATGAGCCACTGATTACTATGGACTTGCCACGGGAA GATGATGAGGCTGCAAAGTATATACAGAATATAACCATTCCTTCTGCTCTGATTGATAAA AAATTCGGGGAACAGTTGAAAAAAGCTATTAAAGATGGTGAAATGGTAAATGTGAATCTG GACTGGAGGGAGGCTGTTCCACATCCAGATGATCGGGTGGAGTATGAGTTGTGGACAAAC AGCAATGACGAATGTGGGCCTAAATGTGATATGCTGATGAATTTCCTTAAGGAATTTAAA GGAGCTGCTCAACTACTCGAGAAAGGTGGTTATAGTCAGTTCACGCCCCATTATATCACC TGGTACTGTCCTCAAGCATTTGTTGTTAGCAAGCAATGCAAGTCTCAGTGTATAAACCAT GGAAGGTACTGTGCGCCTGATCCAGAGCAGGATTTCAGCACTGGTTATGAAGGAAAAGAT GTTGTTGTTGAGAACCTGAGACAGCTTTGTGTATTTCAAGTTGCAAAAGAGAGCAAAAAA CCATGGATCTGGTGGGATTATGTAACTGATTTTCACATAAGGTGCCCAATGAAGGACAAA AAGTATAACAAGAAATGTGCAGAAACTGTCATCAAATCACTAGGTTTAGATGTAAAGAAG GTTGACAAGTGCATGGGAGATCCAAATGCTGATTCGGACCACCCCTTGCTTAAAATGGAG CAGGATGCACAGATTGGGAAAGGATCAAGAGGAGATGTTACTATATTGCCTACTCTTGTT GTGAACAATCGGCAATACCGAGGAAAGCTTGAAAGGAAAGCTGTCCTCAAAGCTATATGT GCTGGCTTTGAAGAAACTACCGAGCCAAATGTTTGTCTTAGTGATGAAATGGAAACTAAT GAGTGCCTGAATGACAACGGGGGTTGCTGGCAAGACAAAGCTGCTAATGTAACAGCTTGC AGGGACACTTTCCGTGGTAGAGTGTGTGAATGCCCTACATTCAATGGTGTGCAGTTTAAA GGCGATGGCTACAGCAATTGTGAACCTGCTGGACCAGGAAAGTGCTTGATAAATCATGGC GGCTGTTGGCATGAGACTCGCAATGGCAAAACATTTTCTGCTTGTCAGGAATCAGGAAAT GGAAAATGCCAGTGTCCAGCTGGTTTCCGAGGGGATGGTGTTAAAAAATGTGAAGACATC AATGAGTGCAAAGAGAAAAAAGCTTGTCAATGTCCAGAATGCAGTTGCAGAGATACATGG GGTGACTATGAATGTACTTGCAGTGGGGACCTACTGTACATCAAAGAGCATGATACTTGC ATAAGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCTTGATA GTCTTGGTAGTTGTGGCAGCAGGAAGTTATGTTGTCTACAAATACAGACTAAGGTCATAC ATGGACTCTGAGATCAGAGCAATCATGGCACAGTACATGCCACTGGACAGTCAAGGGGAG GTGCCAAATCATACAAATGATGAAGAACACCATTAG

Peptide Sequence

PEP ID	Os10t0346600-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:10411380:10418438:-1 gene:Os10g0346600 transcript:Os10t0346600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor 4 precursor (AtVSR4) (Epidermal growth factor receptor-like protein 2b) (AtELP2b) (BP80-like protein a) (AtBP80a). (Os10t0346600-00)
Sequence	MRGPAGLPLPLVVAVALAAAAVMVVEARFVVEKNSLMVTSPTSLRGRHDSAIGNFGVPQY GGSMAGTVVYPKDNADACEAYDGDRHFRAKPGALPNFLLIDRGNCLFAKKVWNAQNAGAS AVLVVDDKDEPLITMDLPREDDEAAKYIQNITIPSALIDKKFGEQLKKAIKDGEMVNVNL DWREAVPHPDDRVEYELWTNSNDECGPKCDMLMNFLKEFKGAAQLLEKGGYSQFTPHYIT WYCPQAFVVSKQCKSQCINHGRYCAPDPEQDFSTGYEGKDVVVENLRQLCVFQVAKESKK PWIWWDYVTDFHIRCPMKDKKYNKKCAETVIKSLGLDVKKVDKCMGDPNADSDHPLLKME QDAQIGKGSRGDVTILPTLVVNNRQYRGKLERKAVLKAICAGFEETTEPNVCLSDEMETN ECLNDNGGCWQDKAANVTACRDTFRGRVCECPTFNGVQFKGDGYSNCEPAGPGKCLINHG GCWHETRNGKTFSACQESGNGKCQCPAGFRGDGVKKCEDINECKEKKACQCPECSCRDTW GDYECTCSGDLLYIKEHDTCISKTAVQGKAAWAAVWGILIVLVVVAAGSYVVYKYRLRSY MDSEIRAIMAQYMPLDSQGEVPNHTNDEEHH

Transcript Sequence

Transcript ID	Os10t0346600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:10411380:10418438:-1 gene:Os10g0346600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Vacuolar sorting receptor 4 precursor (AtVSR4) (Epidermal growth factor receptor-like protein 2b) (AtELP2b) (BP80-like protein a) (AtBP80a). (Os10t0346600-00)
Sequence	GCGCGATGCGGGGGCCGGCGGGGCTGCCGCTGCCGCTGGTGGTGGCGGTGGCGCTCGCCG CGGCGGCGGTGATGGTGGTGGAGGCGCGGTTCGTGGTGGAGAAGAACAGCCTGATGGTGA CGTCGCCGACGTCGCTGCGGGGGAGGCACGACAGCGCCATCGGCAACTTCGGCGTCCCGC AGTACGGCGGGAGCATGGCCGGCACCGTCGTGTACCCCAAGGACAACGCCGACGCCTGCG AAGCCTACGACGGGGACCGCCACTTCCGCGCCAAGCCCGGCGCGCTCCCCAACTTCCTCC TCATCGACCGCGGAAATTGCCTATTTGCTAAGAAGGTTTGGAATGCGCAAAATGCTGGTG CCTCAGCGGTCCTTGTGGTTGATGACAAGGATGAGCCACTGATTACTATGGACTTGCCAC GGGAAGATGATGAGGCTGCAAAGTATATACAGAATATAACCATTCCTTCTGCTCTGATTG ATAAAAAATTCGGGGAACAGTTGAAAAAAGCTATTAAAGATGGTGAAATGGTAAATGTGA ATCTGGACTGGAGGGAGGCTGTTCCACATCCAGATGATCGGGTGGAGTATGAGTTGTGGA CAAACAGCAATGACGAATGTGGGCCTAAATGTGATATGCTGATGAATTTCCTTAAGGAAT TTAAAGGAGCTGCTCAACTACTCGAGAAAGGTGGTTATAGTCAGTTCACGCCCCATTATA TCACCTGGTACTGTCCTCAAGCATTTGTTGTTAGCAAGCAATGCAAGTCTCAGTGTATAA ACCATGGAAGGTACTGTGCGCCTGATCCAGAGCAGGATTTCAGCACTGGTTATGAAGGAA AAGATGTTGTTGTTGAGAACCTGAGACAGCTTTGTGTATTTCAAGTTGCAAAAGAGAGCA AAAAACCATGGATCTGGTGGGATTATGTAACTGATTTTCACATAAGGTGCCCAATGAAGG ACAAAAAGTATAACAAGAAATGTGCAGAAACTGTCATCAAATCACTAGGTTTAGATGTAA AGAAGGTTGACAAGTGCATGGGAGATCCAAATGCTGATTCGGACCACCCCTTGCTTAAAA TGGAGCAGGATGCACAGATTGGGAAAGGATCAAGAGGAGATGTTACTATATTGCCTACTC TTGTTGTGAACAATCGGCAATACCGAGGAAAGCTTGAAAGGAAAGCTGTCCTCAAAGCTA TATGTGCTGGCTTTGAAGAAACTACCGAGCCAAATGTTTGTCTTAGTGATGAAATGGAAA CTAATGAGTGCCTGAATGACAACGGGGGTTGCTGGCAAGACAAAGCTGCTAATGTAACAG CTTGCAGGGACACTTTCCGTGGTAGAGTGTGTGAATGCCCTACATTCAATGGTGTGCAGT TTAAAGGCGATGGCTACAGCAATTGTGAACCTGCTGGACCAGGAAAGTGCTTGATAAATC ATGGCGGCTGTTGGCATGAGACTCGCAATGGCAAAACATTTTCTGCTTGTCAGGAATCAG GAAATGGAAAATGCCAGTGTCCAGCTGGTTTCCGAGGGGATGGTGTTAAAAAATGTGAAG ACATCAATGAGTGCAAAGAGAAAAAAGCTTGTCAATGTCCAGAATGCAGTTGCAGAGATA CATGGGGTGACTATGAATGTACTTGCAGTGGGGACCTACTGTACATCAAAGAGCATGATA CTTGCATAAGTAAGACAGCTGTTCAGGGTAAAGCAGCTTGGGCTGCAGTTTGGGGAATCT TGATAGTCTTGGTAGTTGTGGCAGCAGGAAGTTATGTTGTCTACAAATACAGACTAAGGT CATACATGGACTCTGAGATCAGAGCAATCATGGCACAGTACATGCCACTGGACAGTCAAG GGGAGGTGCCAAATCATACAAATGATGAAGAACACCATTAGCAAGAGTTTAACTGACACA TGCAGAAATGTGATGTTTTGAGATGCTTATCAGGTATACGGGAGTGATGTGGAGGTGAAT GTGGCTTGATATTTGAAGTCCGTTAAATCTGTTGTTCACCTGCTAATTTATGTGGAGCAG TTTCACCATA