Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0346200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:10382942:10388225:1 gene:Os10g0346200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os10t0346200-01)
Sequence	ATGGTCGTCTGCAAATGCCGCAAGGCGACAAGGGTTTATTGCTTCGTGCACAAGGTTCCT GTCTGCGGCGAATGCATCTGCTTCCCGGAGCATCAGTTATGCGTGGTTAAAAATTATGCT GAATGGGTTGTTAATCCTGATTATGACTGGCCACAACACTGTTCATCTTGCAATTCTGTT CTGGAAGCTGGAAGCGAAGAAACTACACGATTGGGTTGCTTGCATGTGATGCACACAAGA TGTTTGATCTCACACATACAAAGTTATTCAACCCAAACTGCACCAGCTGGATATGTTTGT CCTTCATGTTCTACACCTATATGGCCTCCTTCAACTATTAAAGATACTGGCTCGCGCCTT CACTCTAAACTAAAGGAAGCAATAGCCCAGACTGGATTGGAGAAGAACGTATTTGGAAAT CATTTTGTGACAATGCCTAAAGCTGATACTCGCACCCCTCCTGCTTTTGCTTCAGATCCT CTTAAACGTGTATCCATTTCTGGTGATAGAGAATCAAATGGTGCAAACATAATCAATTCT GCTATAGATGCAAATGTGCAATCTGGTGGAATGTATTCTTCTGCTACTGTGGGATCTGGG ACACCTAGTCACGTTGAACCAGAAATAGTTGAAATAGATGGTCCAAGTCCAATAACAACT CAGTTCCCTGAACAGGAGTCCAACTTCATCAGAAGTCCTAGCCCACATGGGCCGAGTGCC ATGACAAGAAAAGGTGCTAACTATGTTGAGAGACAAAATTCAGAGATTTCTTATTATGCT GATGATGAGGACGCAAACCGCAAGAAGTATACCAAAAGGGGTACATTCCGTCACAAATTT CTAAGGATGCTGCTACCTTTCTGGTCCAGTGCATTGCCAACACTGCCAGTTACAGCACCT CCTAGAAAAGAGAGTGATGCTCCAGAGGGCCGTTCACGACATCAAAAATCATCAAGAATG GATCCTACAAAGATCTTACTTGCATTGGCGATCATGGCATGTATAGCAACAATGGGGATA CTTTATTACCGTTTGACACAACGCAGTCTTTCCGAGAACTTTATTGAGGATGAACCTCAA TAG

Peptide Sequence

PEP ID	Os10t0346200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:10382942:10388225:1 gene:Os10g0346200 transcript:Os10t0346200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os10t0346200-01)
Sequence	MVVCKCRKATRVYCFVHKVPVCGECICFPEHQLCVVKNYAEWVVNPDYDWPQHCSSCNSV LEAGSEETTRLGCLHVMHTRCLISHIQSYSTQTAPAGYVCPSCSTPIWPPSTIKDTGSRL HSKLKEAIAQTGLEKNVFGNHFVTMPKADTRTPPAFASDPLKRVSISGDRESNGANIINS AIDANVQSGGMYSSATVGSGTPSHVEPEIVEIDGPSPITTQFPEQESNFIRSPSPHGPSA MTRKGANYVERQNSEISYYADDEDANRKKYTKRGTFRHKFLRMLLPFWSSALPTLPVTAP PRKESDAPEGRSRHQKSSRMDPTKILLALAIMACIATMGILYYRLTQRSLSENFIEDEPQ

Transcript Sequence

Transcript ID	Os10t0346200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:10382942:10388225:1 gene:Os10g0346200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING-type domain containing protein. (Os10t0346200-01)
Sequence	GCTCGCTCTCACCCGCCCACGGATCCGATCCGCCTCCACTCCCTCCCCCACCGGCGGGCG GCCGCCCGAGCGGCGCGGTGCTCCTCCTCCCTCCTCGTCGTCGTCGTCGGCGCCGGCGAT GGTCGTCTGCAAATGCCGCAAGGCGACAAGGGTTTATTGCTTCGTGCACAAGGTTCCTGT CTGCGGCGAATGCATCTGCTTCCCGGAGCATCAGTTATGCGTGGTTAAAAATTATGCTGA ATGGGTTGTTAATCCTGATTATGACTGGCCACAACACTGTTCATCTTGCAATTCTGTTCT GGAAGCTGGAAGCGAAGAAACTACACGATTGGGTTGCTTGCATGTGATGCACACAAGATG TTTGATCTCACACATACAAAGTTATTCAACCCAAACTGCACCAGCTGGATATGTTTGTCC TTCATGTTCTACACCTATATGGCCTCCTTCAACTATTAAAGATACTGGCTCGCGCCTTCA CTCTAAACTAAAGGAAGCAATAGCCCAGACTGGATTGGAGAAGAACGTATTTGGAAATCA TTTTGTGACAATGCCTAAAGCTGATACTCGCACCCCTCCTGCTTTTGCTTCAGATCCTCT TAAACGTGTATCCATTTCTGGTGATAGAGAATCAAATGGTGCAAACATAATCAATTCTGC TATAGATGCAAATGTGCAATCTGGTGGAATGTATTCTTCTGCTACTGTGGGATCTGGGAC ACCTAGTCACGTTGAACCAGAAATAGTTGAAATAGATGGTCCAAGTCCAATAACAACTCA GTTCCCTGAACAGGAGTCCAACTTCATCAGAAGTCCTAGCCCACATGGGCCGAGTGCCAT GACAAGAAAAGGTGCTAACTATGTTGAGAGACAAAATTCAGAGATTTCTTATTATGCTGA TGATGAGGACGCAAACCGCAAGAAGTATACCAAAAGGGGTACATTCCGTCACAAATTTCT AAGGATGCTGCTACCTTTCTGGTCCAGTGCATTGCCAACACTGCCAGTTACAGCACCTCC TAGAAAAGAGAGTGATGCTCCAGAGGGCCGTTCACGACATCAAAAATCATCAAGAATGGA TCCTACAAAGATCTTACTTGCATTGGCGATCATGGCATGTATAGCAACAATGGGGATACT TTATTACCGTTTGACACAACGCAGTCTTTCCGAGAACTTTATTGAGGATGAACCTCAATA GTACCCTGAGGTTGTCAATCTTGCAGTTCATTCCTGGTGCTATGCTGCTGATTCCAAGGG TTTTATACCCTCCTTGTATTTCTTTTCTTCTCCCTTTTTGTGGGGCTTTCTTGGTGGCTG AGATGGGTAGTTAGATACTACATAAGAATTATAGTAGACTGCTTCCATATGATGATTGAT GTGCATGTTTATGTAACTATAATGCTATAAAATATCCTCTTTGTTATTTACACCTGATGA GAAATCATAGAAATTGCCACCATTTGTTTATCTACCTC