Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0345100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:10301639:10304353:-1 gene:Os10g0345100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0345100-01)
Sequence	GAGCCGCTTCTCGCGGCGGCGCCGCCAACGCCCGGCAAGGCCGCCGACGGCGACGGTCCG GAGGAGGGGCGCCGGCTCGCCTCCGCGGAGGCGAAGCGGCTGCTGCGGCTGGCCGGGCCG ATCGTGGCCAGCTGCATCCTGCAGTGCGTGGTGAACATGGTGTCCGTCATGTTCGTCGGC CACCTCGGTGAGCTCCCCCTCGCCGGCGCCTCCCTCGCCACCTCCCTCGCCAACGTCACC GGCTACAGCCTCCTCACGGGCATGGCGACGGCGATGGACACGCTGTGCGGGCAGGCGTAC GGGGCGAGGCAGTACCACCTGCTGGGCGTGTACAAGCAGCGCGCCATGGTGGTGCTCGCG GCGGCGTGCGTCCCCATCGCGCTGGTCTGGGCGTCCGCGGGGCGGATCCTGCTGCTCCTC GGCCAGGACGCGGGCATCGCCGCCGAGGCCGGCGCGTACGCGCGGTGGATGCTCCCGTCG CTCGCCGCCTACGTGCCGCTCCAGTGCCACATCCGGTTCCTGCAGACGCAGACCGTCGTG CTCCCCGTCACGGCGAGCTCCGCCGCCACCGCGCTCCTCCACCCGCTCGTGTGCTGGCTG CTCGTGTTCAGGGCCGGCATGGGGAGCAAGGGAGCCGCGCTCGCCAACGCCATCTCCTAC GCCGTCAACCTCGCCATACTCGCCGTCTACGTCAGGGCGTCCAACACCTGCAAGGGCAGG TGGAGCGGCTTCTCCGGCGAGGCCTTCAAGGAGCTCCGCCAGTTCGCCGCGCTCGCCATG CCCTCCGCCATGATGATCTGCTTGGAGTGGTGGTCATTTGAAATCCTTGTGCTGCTCTCT GGACTTCTGCCTAATCCTCAGCTTGAGACATCAGTGCTGTCAATATGCTTGAACACTGGG GCTCTGCTGTACATGGTACCATTGGGTCTATGCTCTTCTATAAGCACGCGTGTTTCGAAC GAAATTGGAGCCGGGCAGCCTCAAGCAGCGAAGCGAGCAACGCGAGTGGTGATGTATATG GCTTTGTCCGAAGGATTGGTGATAAGCTTTACCATGTTCTTGCTTCGCAATGTCTGGGGG TACATGTACAGCAACGAGCAGGAAGTTGTGACATACATTGCTAGGATGCTGCCGATTCTC GACATATCTTTCTTCATAGATGGGCTTCACAGTTCTCTGTCAGGCGTGCTCACGGGTTGT GGCAAGCAGAAAATTGGTGCAGCCGTGAACCTCGGGGCATTCTACCTTGTAGGCATTCCG GTGGCTGTTCTGCTTGCATTCTACCTCCATCTGAATGGAATGGGCCTGTGGCTTGGCATC GTCTGCGGCAGCATCATCAAACTACTGGTGCTTATAATTGTCTCGTGTTGCATAGACTGG GAAAAGGAGGCGATCTTGGCAAAGGACAGGGTCTTCAGCTCATCTCTTCCAGTAGCATGA

Peptide Sequence

PEP ID	Os10t0345100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:10301639:10304353:-1 gene:Os10g0345100 transcript:Os10t0345100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0345100-01)
Sequence	EPLLAAAPPTPGKAADGDGPEEGRRLASAEAKRLLRLAGPIVASCILQCVVNMVSVMFVG HLGELPLAGASLATSLANVTGYSLLTGMATAMDTLCGQAYGARQYHLLGVYKQRAMVVLA AACVPIALVWASAGRILLLLGQDAGIAAEAGAYARWMLPSLAAYVPLQCHIRFLQTQTVV LPVTASSAATALLHPLVCWLLVFRAGMGSKGAALANAISYAVNLAILAVYVRASNTCKGR WSGFSGEAFKELRQFAALAMPSAMMICLEWWSFEILVLLSGLLPNPQLETSVLSICLNTG ALLYMVPLGLCSSISTRVSNEIGAGQPQAAKRATRVVMYMALSEGLVISFTMFLLRNVWG YMYSNEQEVVTYIARMLPILDISFFIDGLHSSLSGVLTGCGKQKIGAAVNLGAFYLVGIP VAVLLAFYLHLNGMGLWLGIVCGSIIKLLVLIIVSCCIDWEKEAILAKDRVFSSSLPVA

Transcript Sequence

Transcript ID	Os10t0345100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:10301639:10304353:-1 gene:Os10g0345100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0345100-01)
Sequence	ACGAGCCGCTTCTCGCGGCGGCGCCGCCAACGCCCGGCAAGGCCGCCGACGGCGACGGTC CGGAGGAGGGGCGCCGGCTCGCCTCCGCGGAGGCGAAGCGGCTGCTGCGGCTGGCCGGGC CGATCGTGGCCAGCTGCATCCTGCAGTGCGTGGTGAACATGGTGTCCGTCATGTTCGTCG GCCACCTCGGTGAGCTCCCCCTCGCCGGCGCCTCCCTCGCCACCTCCCTCGCCAACGTCA CCGGCTACAGCCTCCTCACGGGCATGGCGACGGCGATGGACACGCTGTGCGGGCAGGCGT ACGGGGCGAGGCAGTACCACCTGCTGGGCGTGTACAAGCAGCGCGCCATGGTGGTGCTCG CGGCGGCGTGCGTCCCCATCGCGCTGGTCTGGGCGTCCGCGGGGCGGATCCTGCTGCTCC TCGGCCAGGACGCGGGCATCGCCGCCGAGGCCGGCGCGTACGCGCGGTGGATGCTCCCGT CGCTCGCCGCCTACGTGCCGCTCCAGTGCCACATCCGGTTCCTGCAGACGCAGACCGTCG TGCTCCCCGTCACGGCGAGCTCCGCCGCCACCGCGCTCCTCCACCCGCTCGTGTGCTGGC TGCTCGTGTTCAGGGCCGGCATGGGGAGCAAGGGAGCCGCGCTCGCCAACGCCATCTCCT ACGCCGTCAACCTCGCCATACTCGCCGTCTACGTCAGGGCGTCCAACACCTGCAAGGGCA GGTGGAGCGGCTTCTCCGGCGAGGCCTTCAAGGAGCTCCGCCAGTTCGCCGCGCTCGCCA TGCCCTCCGCCATGATGATCTGCTTGGAGTGGTGGTCATTTGAAATCCTTGTGCTGCTCT CTGGACTTCTGCCTAATCCTCAGCTTGAGACATCAGTGCTGTCAATATGCTTGAACACTG GGGCTCTGCTGTACATGGTACCATTGGGTCTATGCTCTTCTATAAGCACGCGTGTTTCGA ACGAAATTGGAGCCGGGCAGCCTCAAGCAGCGAAGCGAGCAACGCGAGTGGTGATGTATA TGGCTTTGTCCGAAGGATTGGTGATAAGCTTTACCATGTTCTTGCTTCGCAATGTCTGGG GGTACATGTACAGCAACGAGCAGGAAGTTGTGACATACATTGCTAGGATGCTGCCGATTC TCGACATATCTTTCTTCATAGATGGGCTTCACAGTTCTCTGTCAGGCGTGCTCACGGGTT GTGGCAAGCAGAAAATTGGTGCAGCCGTGAACCTCGGGGCATTCTACCTTGTAGGCATTC CGGTGGCTGTTCTGCTTGCATTCTACCTCCATCTGAATGGAATGGGCCTGTGGCTTGGCA TCGTCTGCGGCAGCATCATCAAACTACTGGTGCTTATAATTGTCTCGTGTTGCATAGACT GGGAAAAGGAGGCGATCTTGGCAAAGGACAGGGTCTTCAGCTCATCTCTTCCAGTAGCAT GAAAATGTAGTGTGCCACATCTCACATGCAGTGCACCAGGCAATTAATAGGATGCAAAAT TGGTCTATAGCACATCAGCATCAATCATCATTCTAAAAAGCATACGAATTGATCATCGTT CGGAAAAGCATACGAATTGATCTGCAAGAGGAGAATAGGAGCCGTCTTGTAACTTCTATT GGGATTTCGAAGAAGTCGAAGGAAAAACGTAGTTGAGGACTGCATCAATCACAATATGAT CGAGGCCATGTCAGCAATTTTGGACTTCGCGTGTTGTGTATGACTATTGTTTTTGCCAAC AGTGTACAACTGAGCTCTAGTTAGGATAGGTATAGGTACAGTGAGAGTATGTACCTAGTA TGAATTTTGATGATTTTTGATGTCTCTGTCAGTGACATTGTAATGAGCAGCGCACAACAT CTCGGAATGAACAAATGAAAACTTTGACCCTTTTTGTCTCTG