Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0344900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:10293210:10295890:1 gene:Os10g0344900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0344900-01)
Sequence	ATGGAGAAGCCGGCGGCGAGCGTGGAGGAGCCGCTGCTTGTTGGCGCTGGCGAGAAGAAG GGCGAGAGCGCGGCCGCGGCGGAGCTGAAGCGGCTGCTCCGGCTGGCGGGGCCGCTGGTG GCGAGCGGCGTGCTGCGGAACGTGGTGCAGATGGTGTCCGTCATGTTCGTCGGCCACCTC GGCGAGCTCCCCCTCGCCGGCGCCTCCCTCGCCACCTCCCTCGCCAACGTCACCGGCTTC AGCCTGCTCTTCGGCATGGCGAGCGCGCTGGACACGCTGTGCGGGCAGGCGTACGGCGCG CGCCAGCACCACCTCCTCGGCGTCTACAAGCAGCGCGCCATGCTGGTGCTCGCCGTGGCC GCCGTGCCCATCGCGCTCGTCTGGGCCAGCGCCGGCGAGATCCTCCTCCTGTTCGGCCAG GACCCGGCCATCGCCGCCGAGGCCGGCGCGTACGCGCGGTGGCTGATCCCGTCGCTCGTC CCGTTCGTGCCGCTGGTGTGCCACATCCGGTTCCTGCAGGCGCAGAGCGCCGTGCTGCCG GTGATGGCGAGCTGCGGCGTCACGGCGGCGAGCCACGTGGCCGTGTGCTGGGCGCTGGTG CGCAAGGCCGGCATGGGCAGCAGGGGCGCCGCGCTGGCGAACGCCGTCTCCTATGGCGTC AACCTCACCATAATGTCTCTCTATGTCAGGCTGTCGCGCTCCTGCGAGAAGACATGGACT GGCTTCTCCATGGAGGCCTTCAGGGAGCTCCGCCAGTATGCGGAGCTCGCCATCCCCGCG GCAATGATGGTCTGTTTGGAGTGGTGGTCATTTGAATTTCTTGTGATGCTCTCTGGTCTT CTGCCCAATCCTAAACTTGAAACCTCAGTGTTGTCGATATGTCTCAACACTGGTGCTCTG CTGGTCATGGTTCCAATTGGTCTCAGCACAGCTATAAGCACGCGTGTTTGGAACGAACTA GGTGCCGGCAATCCCCAGGCAGCGAAGCTGGCAACTCGAGTGGTCATATGTATGGCCATG ACCGAAGGCTCGGTGGTTGCGTTTACGATGATTCTGTTGCGCAATTCCTGGGGTCACATG TACAGTGATGAGGCTGAAGTTGTCACCTACATTGCTCGTATGATACCTGTTCTAGCCATA TCATTCTTCATTGATGGGATGCACAGCGCTCTTTCAGGAGTGCTCACTGGATGTGGCAAG CAGAAGATCGGCGCACGGGTAAATCTTGGCGCATTTTACTTGGCAGGCATTCCTATGGCC GTCTTTCTTGCATTTGTGCTACATCTGAATGGAATGGGCCTTTGGCTTGGCATCGTTTGC GGGAGCCTCAGCAAGCTTATCTTGCTCTTTTGGATCACAATGAGTATAAACTGGGAGAAG GAATCAACCAGGGCGAAAGAATTGGTGTTCAGTTCATCTCTTCCTGTAGCATGA

Peptide Sequence

PEP ID	Os10t0344900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:10293210:10295890:1 gene:Os10g0344900 transcript:Os10t0344900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0344900-01)
Sequence	MEKPAASVEEPLLVGAGEKKGESAAAAELKRLLRLAGPLVASGVLRNVVQMVSVMFVGHL GELPLAGASLATSLANVTGFSLLFGMASALDTLCGQAYGARQHHLLGVYKQRAMLVLAVA AVPIALVWASAGEILLLFGQDPAIAAEAGAYARWLIPSLVPFVPLVCHIRFLQAQSAVLP VMASCGVTAASHVAVCWALVRKAGMGSRGAALANAVSYGVNLTIMSLYVRLSRSCEKTWT GFSMEAFRELRQYAELAIPAAMMVCLEWWSFEFLVMLSGLLPNPKLETSVLSICLNTGAL LVMVPIGLSTAISTRVWNELGAGNPQAAKLATRVVICMAMTEGSVVAFTMILLRNSWGHM YSDEAEVVTYIARMIPVLAISFFIDGMHSALSGVLTGCGKQKIGARVNLGAFYLAGIPMA VFLAFVLHLNGMGLWLGIVCGSLSKLILLFWITMSINWEKESTRAKELVFSSSLPVA

Transcript Sequence

Transcript ID	Os10t0344900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:10293210:10295890:1 gene:Os10g0344900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0344900-01)
Sequence	GGCTGCCTCCCACAATTCGGTGGTCACTCGTCAGTCGTGTCGTCTGCTCACGCTCGCCAA GAAAGATTGGCCATGGAGAAGCCGGCGGCGAGCGTGGAGGAGCCGCTGCTTGTTGGCGCT GGCGAGAAGAAGGGCGAGAGCGCGGCCGCGGCGGAGCTGAAGCGGCTGCTCCGGCTGGCG GGGCCGCTGGTGGCGAGCGGCGTGCTGCGGAACGTGGTGCAGATGGTGTCCGTCATGTTC GTCGGCCACCTCGGCGAGCTCCCCCTCGCCGGCGCCTCCCTCGCCACCTCCCTCGCCAAC GTCACCGGCTTCAGCCTGCTCTTCGGCATGGCGAGCGCGCTGGACACGCTGTGCGGGCAG GCGTACGGCGCGCGCCAGCACCACCTCCTCGGCGTCTACAAGCAGCGCGCCATGCTGGTG CTCGCCGTGGCCGCCGTGCCCATCGCGCTCGTCTGGGCCAGCGCCGGCGAGATCCTCCTC CTGTTCGGCCAGGACCCGGCCATCGCCGCCGAGGCCGGCGCGTACGCGCGGTGGCTGATC CCGTCGCTCGTCCCGTTCGTGCCGCTGGTGTGCCACATCCGGTTCCTGCAGGCGCAGAGC GCCGTGCTGCCGGTGATGGCGAGCTGCGGCGTCACGGCGGCGAGCCACGTGGCCGTGTGC TGGGCGCTGGTGCGCAAGGCCGGCATGGGCAGCAGGGGCGCCGCGCTGGCGAACGCCGTC TCCTATGGCGTCAACCTCACCATAATGTCTCTCTATGTCAGGCTGTCGCGCTCCTGCGAG AAGACATGGACTGGCTTCTCCATGGAGGCCTTCAGGGAGCTCCGCCAGTATGCGGAGCTC GCCATCCCCGCGGCAATGATGGTCTGTTTGGAGTGGTGGTCATTTGAATTTCTTGTGATG CTCTCTGGTCTTCTGCCCAATCCTAAACTTGAAACCTCAGTGTTGTCGATATGTCTCAAC ACTGGTGCTCTGCTGGTCATGGTTCCAATTGGTCTCAGCACAGCTATAAGCACGCGTGTT TGGAACGAACTAGGTGCCGGCAATCCCCAGGCAGCGAAGCTGGCAACTCGAGTGGTCATA TGTATGGCCATGACCGAAGGCTCGGTGGTTGCGTTTACGATGATTCTGTTGCGCAATTCC TGGGGTCACATGTACAGTGATGAGGCTGAAGTTGTCACCTACATTGCTCGTATGATACCT GTTCTAGCCATATCATTCTTCATTGATGGGATGCACAGCGCTCTTTCAGGAGTGCTCACT GGATGTGGCAAGCAGAAGATCGGCGCACGGGTAAATCTTGGCGCATTTTACTTGGCAGGC ATTCCTATGGCCGTCTTTCTTGCATTTGTGCTACATCTGAATGGAATGGGCCTTTGGCTT GGCATCGTTTGCGGGAGCCTCAGCAAGCTTATCTTGCTCTTTTGGATCACAATGAGTATA AACTGGGAGAAGGAATCAACCAGGGCGAAAGAATTGGTGTTCAGTTCATCTCTTCCTGTA GCATGAAGAAAAACAATGCATCAGAATTTCATGATATGGTGCAATTGTTATTGTGAAAGC AACACAGAACCAAATGTTATGAAGCTCGCCTTTCATCTTTAAGCACCCAGTTTATTAACA TTTGTAACATGAATTTTTGTTCTTGTGATAACACCTATTTAATATTTTTTTTCTTGTTCA GATTGTACTCTGTAAACTAAGGATATATCTTATATGCATCGATTAATTGAAAATCTAAGA AGCATATTATAGGAAATT