Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0343400-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:10180422:10187639:-1 gene:Os10g0343400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE F7 description:Cellulose synthase family protein. (Os10t0343400-01)
Sequence	ATGCCGCCGTCAGCAGGCTTGGCCACTGAGAGCTTGCCGGCGGCGACATGCCCGGCCAAG AAGGATGCCTATGCCGCGGCGGCGTCGCCGGAGTCCGAGACGAAGCTGGCCGCCGGCGAC GAGAGGGCGCCGCTCGTCCGGACGACTCGCATCTCGACAACTACCATCAAGTTATACAGG CTCACCATCTTTGTTCGCATCGCCATCTTCGTGCTCTTCTTCAAGTGGAGAATCACCTAC GCTGCTCGCGCCATCAGCTCCACCGACGCCGGCGGCATCGGCATGAGCAAGGCGGCGACA TTTTGGACGGCGTCCATCGCCGGCGAGCTCTGGTTCGCGTTCATGTGGGTGCTCGACCAG CTGCCCAAGACGATGCCCGTCCGGCGCGCCGTCGACGTCACGGCGCTGAACGACGACACG CTGCTCCCGGCGATGGACGTGTTCGTCACCACCGCCGACCCCGACAAGGAGCCGCCGCTC GCCACGGCGAACACCGTGCTGTCCATCCTCGCCGCGGGCTACCCCGCCGGCAAGGTGACG TGCTACGTCTCCGACGACGCCGGCGCGGAGGTGACACGCGGGGCGGTCGTGGAGGCGGCC CGGTTCGCGGCACTGTGGGTGCCCTTCTGCCGGAAGCACGGCGTCGAGCCGAGGAACCCG GAGGCGTACTTCAACGGCGGCGAGGGTGGCGGTGGTGGCGGCAAGGCGAGGGTGGTGGCG AGGGGGAGCTACAAGGGGAGGGCGTGGCCGGAGCTGGTGCGCGACAGGAGGCGGGTGCGC CGCGAGTACGAGGAGATGCGGCTGCGGATCGACGCGCTGCAGGCCGCCGACGCGCGCCGC CGGCGCTGCGGCGCGGCCGATGACCACGCCGGAGTTGTGCAGGTACTGATCGATTCTGCT GGGAGCGCGCCACAGCTCGGCGTCGCGGACGGGAGCAAGCTCATCGACCTCGCCTCCGTC GACGTGCGCCTCCCGGCGCTTGTGTACGTGTGCCGCGAGAAGCGCCGCGGCCGCGCACAC CACCGGAAGGCCGGCGCCATGAACGCGCTGCTGCGCGCATCCGCCGTGCTCTCGAACGCG CCCTTCATCCTCAACCTCGACTGCGACCACTATGTCAACAACTCGCAGGCCCTCCGCGCC GGCATTTGCTTCATGATCGAACGCCGCGGCGGCGGCGCCGAAGACGCCGGCGATGTCGCG TTCGTCCAGTTCCCGCAGCGGTTCGACGGCGTCGATCCCGGCGACCGCTACGCCAACCAC AACCGCGTCTTCTTCGACTGTACCGAGCTTGGCCTCGACGGCCTCCAGGGCCCCATCTAC GTCGGCACCGGCTGCTTGTTCCGCCGCGTCGCGCTCTACGGCGTCGACCCACCGCGCTGG AGATCGCCCGGCGGCGGTGTCGCCGCGGACCCTGCCAAGTTCGGCGAGTCGGCGCCGTTC CTAGCCTCCGTTCGGGCGGAGCAGAGTCACAGTCGCGACGACGGCGACGCCATTGCCGAG GCGAGTGCGCTCGTGTCGTGCGCGTACGAGGACGGGACGGCGTGGGGCAGGGACGTCGGC TGGGTGTACGGCACCGTGACGGAGGACGTGGCCACGGGCTTCTGCATGCACCGGCGAGGG TGGCGCTCCGCCTACTACGCCGCCGCGCCCGACGCGTTCCGCGGCACGGCGCCGATCAAC CTCGCCGACCGCCTCCACCAGGTGCTCCGCTGGGCGGCGGGCTCCCTCGAGATCTTCTTC TCCCGCAACAACGCACTCCTCGCCGGCGGCCGCCGCCGCCTCCACCCGCTGCAGCGCGCC GCCTACCTCAACACGACGGTGTACCCGTTCACGTCGCTCTTCCTCATGGCCTACTGCCTC TTCCCGGCGATCCCGCTCATCGCCGGCGGCGGCGGCTGGAACGCCGCGCCGACACCGACG TACGTCGCGTTCCTGGCGGCGCTGATGGTGACGCTCGCGGCGGTGGCCGTGCTGGAGACG AGGTGGTCGGGGATCGCGCTGGGTGAGTGGTGGCGGAACGAGCAGTTCTGGATGGTGTCC GCGACGAGCGCGTACCTCGCCGCGGTGGCGCAGGTGGCGCTCAAGGTCGCGACGGGGAAG GAAATATCGTTCAAGCTGACCTCGAAGCATCTCGCGTCGTCGGCGACGCCGGTCGCCGGT AAGGATAGGCAGTACGCGGAGCTGTACGCCGTGAGGTGGACGGCGCTGATGGCGCCGACG GCGGCGGCTCTGGCAGTGAACGTGGCGTCGATGGCGGCGGCGGGTGGTGGTGGCCGGTGG TGGTGGTGGGACGCTCCGTCGGCGGCGGCGGCGGCGGCGGCGGCACTCCCGGTGGCGTTC AACGTGTGGGTGGTGGTGCATCTCTACCCGTTCGCGCTCGGGCTGATGGGTCGCCGGAGC AAGGCGGTGCGCCCCATTCTGTTCCTGTTCGCCGTCGTCGCCTACCTCGCCGTCCGCTTC CTTTGTCTCTTGTTACAATTCCATACGGCTTAA

Peptide Sequence

PEP ID	Os10t0343400-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:10180422:10187639:-1 gene:Os10g0343400 transcript:Os10t0343400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE F7 description:Cellulose synthase family protein. (Os10t0343400-01)
Sequence	MPPSAGLATESLPAATCPAKKDAYAAAASPESETKLAAGDERAPLVRTTRISTTTIKLYR LTIFVRIAIFVLFFKWRITYAARAISSTDAGGIGMSKAATFWTASIAGELWFAFMWVLDQ LPKTMPVRRAVDVTALNDDTLLPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVT CYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYFNGGEGGGGGGKARVVA RGSYKGRAWPELVRDRRRVRREYEEMRLRIDALQAADARRRRCGAADDHAGVVQVLIDSA GSAPQLGVADGSKLIDLASVDVRLPALVYVCREKRRGRAHHRKAGAMNALLRASAVLSNA PFILNLDCDHYVNNSQALRAGICFMIERRGGGAEDAGDVAFVQFPQRFDGVDPGDRYANH NRVFFDCTELGLDGLQGPIYVGTGCLFRRVALYGVDPPRWRSPGGGVAADPAKFGESAPF LASVRAEQSHSRDDGDAIAEASALVSCAYEDGTAWGRDVGWVYGTVTEDVATGFCMHRRG WRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRA AYLNTTVYPFTSLFLMAYCLFPAIPLIAGGGGWNAAPTPTYVAFLAALMVTLAAVAVLET RWSGIALGEWWRNEQFWMVSATSAYLAAVAQVALKVATGKEISFKLTSKHLASSATPVAG KDRQYAELYAVRWTALMAPTAAALAVNVASMAAAGGGGRWWWWDAPSAAAAAAAALPVAF NVWVVVHLYPFALGLMGRRSKAVRPILFLFAVVAYLAVRFLCLLLQFHTA

Transcript Sequence

Transcript ID	Os10t0343400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:10180422:10187639:-1 gene:Os10g0343400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE F7 description:Cellulose synthase family protein. (Os10t0343400-01)
Sequence	GAATGCATTAGGAATATATTTGAAGCTAGAGAGAGCACATGCCGCCGTCAGCAGGCTTGG CCACTGAGAGCTTGCCGGCGGCGACATGCCCGGCCAAGAAGGATGCCTATGCCGCGGCGG CGTCGCCGGAGTCCGAGACGAAGCTGGCCGCCGGCGACGAGAGGGCGCCGCTCGTCCGGA CGACTCGCATCTCGACAACTACCATCAAGTTATACAGGCTCACCATCTTTGTTCGCATCG CCATCTTCGTGCTCTTCTTCAAGTGGAGAATCACCTACGCTGCTCGCGCCATCAGCTCCA CCGACGCCGGCGGCATCGGCATGAGCAAGGCGGCGACATTTTGGACGGCGTCCATCGCCG GCGAGCTCTGGTTCGCGTTCATGTGGGTGCTCGACCAGCTGCCCAAGACGATGCCCGTCC GGCGCGCCGTCGACGTCACGGCGCTGAACGACGACACGCTGCTCCCGGCGATGGACGTGT TCGTCACCACCGCCGACCCCGACAAGGAGCCGCCGCTCGCCACGGCGAACACCGTGCTGT CCATCCTCGCCGCGGGCTACCCCGCCGGCAAGGTGACGTGCTACGTCTCCGACGACGCCG GCGCGGAGGTGACACGCGGGGCGGTCGTGGAGGCGGCCCGGTTCGCGGCACTGTGGGTGC CCTTCTGCCGGAAGCACGGCGTCGAGCCGAGGAACCCGGAGGCGTACTTCAACGGCGGCG AGGGTGGCGGTGGTGGCGGCAAGGCGAGGGTGGTGGCGAGGGGGAGCTACAAGGGGAGGG CGTGGCCGGAGCTGGTGCGCGACAGGAGGCGGGTGCGCCGCGAGTACGAGGAGATGCGGC TGCGGATCGACGCGCTGCAGGCCGCCGACGCGCGCCGCCGGCGCTGCGGCGCGGCCGATG ACCACGCCGGAGTTGTGCAGGTACTGATCGATTCTGCTGGGAGCGCGCCACAGCTCGGCG TCGCGGACGGGAGCAAGCTCATCGACCTCGCCTCCGTCGACGTGCGCCTCCCGGCGCTTG TGTACGTGTGCCGCGAGAAGCGCCGCGGCCGCGCACACCACCGGAAGGCCGGCGCCATGA ACGCGCTGCTGCGCGCATCCGCCGTGCTCTCGAACGCGCCCTTCATCCTCAACCTCGACT GCGACCACTATGTCAACAACTCGCAGGCCCTCCGCGCCGGCATTTGCTTCATGATCGAAC GCCGCGGCGGCGGCGCCGAAGACGCCGGCGATGTCGCGTTCGTCCAGTTCCCGCAGCGGT TCGACGGCGTCGATCCCGGCGACCGCTACGCCAACCACAACCGCGTCTTCTTCGACTGTA CCGAGCTTGGCCTCGACGGCCTCCAGGGCCCCATCTACGTCGGCACCGGCTGCTTGTTCC GCCGCGTCGCGCTCTACGGCGTCGACCCACCGCGCTGGAGATCGCCCGGCGGCGGTGTCG CCGCGGACCCTGCCAAGTTCGGCGAGTCGGCGCCGTTCCTAGCCTCCGTTCGGGCGGAGC AGAGTCACAGTCGCGACGACGGCGACGCCATTGCCGAGGCGAGTGCGCTCGTGTCGTGCG CGTACGAGGACGGGACGGCGTGGGGCAGGGACGTCGGCTGGGTGTACGGCACCGTGACGG AGGACGTGGCCACGGGCTTCTGCATGCACCGGCGAGGGTGGCGCTCCGCCTACTACGCCG CCGCGCCCGACGCGTTCCGCGGCACGGCGCCGATCAACCTCGCCGACCGCCTCCACCAGG TGCTCCGCTGGGCGGCGGGCTCCCTCGAGATCTTCTTCTCCCGCAACAACGCACTCCTCG CCGGCGGCCGCCGCCGCCTCCACCCGCTGCAGCGCGCCGCCTACCTCAACACGACGGTGT ACCCGTTCACGTCGCTCTTCCTCATGGCCTACTGCCTCTTCCCGGCGATCCCGCTCATCG CCGGCGGCGGCGGCTGGAACGCCGCGCCGACACCGACGTACGTCGCGTTCCTGGCGGCGC TGATGGTGACGCTCGCGGCGGTGGCCGTGCTGGAGACGAGGTGGTCGGGGATCGCGCTGG GTGAGTGGTGGCGGAACGAGCAGTTCTGGATGGTGTCCGCGACGAGCGCGTACCTCGCCG CGGTGGCGCAGGTGGCGCTCAAGGTCGCGACGGGGAAGGAAATATCGTTCAAGCTGACCT CGAAGCATCTCGCGTCGTCGGCGACGCCGGTCGCCGGTAAGGATAGGCAGTACGCGGAGC TGTACGCCGTGAGGTGGACGGCGCTGATGGCGCCGACGGCGGCGGCTCTGGCAGTGAACG TGGCGTCGATGGCGGCGGCGGGTGGTGGTGGCCGGTGGTGGTGGTGGGACGCTCCGTCGG CGGCGGCGGCGGCGGCGGCGGCACTCCCGGTGGCGTTCAACGTGTGGGTGGTGGTGCATC TCTACCCGTTCGCGCTCGGGCTGATGGGTCGCCGGAGCAAGGCGGTGCGCCCCATTCTGT TCCTGTTCGCCGTCGTCGCCTACCTCGCCGTCCGCTTCCTTTGTCTCTTGTTACAATTCC ATACGGCTTAAAGGCATTCTTAATTTCGACCCTACAATTACAGAATTACTACTTTTCACT CACTAGGAATTAAGCTGGAATTCACGAAGCTAAATGGTATAGATATTTGGGGTGTTACAC TTTTAACCCATGTTGCTCATTGTTTCTTTTCTCTATGGTGTTACAAGATGTTACGAGCAA GTTTAATAGTATAGCAAACTACTAGCTTC