Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0343100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:10170579:10174444:1 gene:Os10g0343100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin 6, N-terminal domain containing protein. (Os10t0343100-01)
Sequence	ATGGCCACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCGGCCGCCGAGGAGGTG CAGGAGTCCGCCGACCGGATGGAGTCGGTGTACAGGAGGTGGTTGCAGGAGAGGAAAGAA GTAGGTGGCGGCGCGGTGGAGACGGCGGCGGAACGTGGTGGTGGTGGATGGGGGCGAGCC GCTGGGGATCTCCGCCGCGAGCTGCACACGGCGCTCGGCACCGCCAAGTGGCAGCTTGAT GAGTTGCAGCGGGCTATTAAATCAAATTATAGTGTTGTGTTAGCTGGCAAAGATACTAGA GCTCGGCATGATGACTTTGTTTCAGCCATTGGGCATCGTATCCTAGAGGTGGAGAAGTTC TTGAAAGAATCCAATACTACTGAAGGGCGTGGCCCTCTTAGCTGGGTTCGCTTGGATGAG GGTGAACGTGAAGAGTTAGCTCATTTCCTTTCAGCAGGAACTTATCAAAAACGTGATGAG GTGGTTACAATTACATCTGCTGGTGACATTGAGGTTGGTAGCAATGCAAGAAGGGTGAAA AAGGGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGCTCAGCAGAGTCAGGTTTAGTG TCAACTAAGGAGGAGACAGCTCCAGGTCATAGGAGAACGGCAAGTGCCTATGCTGATATT GGATCATGGACTATTACAATTCCTGATGAGGCCAATGGCATCGATGAACAATCATTTGAT GATCTGCCCAAGGTACCTTTGGTTAAGAGCCCTAGCTCTTCTGTATTAATGAATGCCTTC CAATCAAAGACAAGAATGAAGACAAAGAATGGAGCCAAGAAGTTGGCTGGAGCTGACCAA CAGGATGTTGTGGAAACTCTTCCTCTGACAAATTCTCGCTCGTGCCAGGGGTTTGATGGG TTGTTTCAAAGAAGCAAAAGTTGCTTGAGCACCTCTGATGATGAGGATAACTGCAATAAG AAACTTTATGGTTGCCTTGGTGCATTCCGTCGGCTACTTCAGAGGTCTCAGTATCAAGTT CAATATGGACGTCCTATTCAGTTACTTATCCTAGCAATTGTTGTTTTACTAGTCTTAATT TATGCCATGAAGGCAATTTTGTGA

Peptide Sequence

PEP ID	Os10t0343100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:10170579:10174444:1 gene:Os10g0343100 transcript:Os10t0343100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin 6, N-terminal domain containing protein. (Os10t0343100-01)
Sequence	MATSFDRWEKDPFFPAAEEVQESADRMESVYRRWLQERKEVGGGAVETAAERGGGGWGRA AGDLRRELHTALGTAKWQLDELQRAIKSNYSVVLAGKDTRARHDDFVSAIGHRILEVEKF LKESNTTEGRGPLSWVRLDEGEREELAHFLSAGTYQKRDEVVTITSAGDIEVGSNARRVK KGVSIDSSNDSSGSAESGLVSTKEETAPGHRRTASAYADIGSWTITIPDEANGIDEQSFD DLPKVPLVKSPSSSVLMNAFQSKTRMKTKNGAKKLAGADQQDVVETLPLTNSRSCQGFDG LFQRSKSCLSTSDDEDNCNKKLYGCLGAFRRLLQRSQYQVQYGRPIQLLILAIVVLLVLI YAMKAIL

Transcript Sequence

Transcript ID	Os10t0343100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:10170579:10174444:1 gene:Os10g0343100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin 6, N-terminal domain containing protein. (Os10t0343100-01)
Sequence	GCTTCGCTGCCTTTTGCCTTCTTCCTCCTCCTCTCCACCACCACCGCCACCGGCCGACGC ATCTCCGATTCGATTTCGCCTTCCCACGAATCTATCTCCCCCCGAGTCCCCAGCGAGATG GCCACGTCGTTCGACCGCTGGGAGAAGGACCCCTTCTTCCCGGCCGCCGAGGAGGTGCAG GAGTCCGCCGACCGGATGGAGTCGGTGTACAGGAGGTGGTTGCAGGAGAGGAAAGAAGTA GGTGGCGGCGCGGTGGAGACGGCGGCGGAACGTGGTGGTGGTGGATGGGGGCGAGCCGCT GGGGATCTCCGCCGCGAGCTGCACACGGCGCTCGGCACCGCCAAGTGGCAGCTTGATGAG TTGCAGCGGGCTATTAAATCAAATTATAGTGTTGTGTTAGCTGGCAAAGATACTAGAGCT CGGCATGATGACTTTGTTTCAGCCATTGGGCATCGTATCCTAGAGGTGGAGAAGTTCTTG AAAGAATCCAATACTACTGAAGGGCGTGGCCCTCTTAGCTGGGTTCGCTTGGATGAGGGT GAACGTGAAGAGTTAGCTCATTTCCTTTCAGCAGGAACTTATCAAAAACGTGATGAGGTG GTTACAATTACATCTGCTGGTGACATTGAGGTTGGTAGCAATGCAAGAAGGGTGAAAAAG GGTGTTTCAATTGATAGTTCGAATGATTCTTCGGGCTCAGCAGAGTCAGGTTTAGTGTCA ACTAAGGAGGAGACAGCTCCAGGTCATAGGAGAACGGCAAGTGCCTATGCTGATATTGGA TCATGGACTATTACAATTCCTGATGAGGCCAATGGCATCGATGAACAATCATTTGATGAT CTGCCCAAGGTACCTTTGGTTAAGAGCCCTAGCTCTTCTGTATTAATGAATGCCTTCCAA TCAAAGACAAGAATGAAGACAAAGAATGGAGCCAAGAAGTTGGCTGGAGCTGACCAACAG GATGTTGTGGAAACTCTTCCTCTGACAAATTCTCGCTCGTGCCAGGGGTTTGATGGGTTG TTTCAAAGAAGCAAAAGTTGCTTGAGCACCTCTGATGATGAGGATAACTGCAATAAGAAA CTTTATGGTTGCCTTGGTGCATTCCGTCGGCTACTTCAGAGGTCTCAGTATCAAGTTCAA TATGGACGTCCTATTCAGTTACTTATCCTAGCAATTGTTGTTTTACTAGTCTTAATTTAT GCCATGAAGGCAATTTTGTGACTTTTTTGATCAACTAGTGTCTCACGATTGACTTGCACT TCTTCATCAGCAGTCTGTAAGGTGTATGACAATTCATAGCTGATGAAACTAAAAGGGGAA GTGGTATTGTTTCTCTAGCTAGTTGAATGCCAGTGACAGTGAACACTGTTTTGTATGTTC GAAGGGATTCTATCATAACTCGCAAGATTGTCTTGGCTATGAAGAAACAACCTGACATGG GAAGCACAACATTTAGCAACCCAATATAGCAAAATCAGTGAAGGATTGATTGTATGGACC GGCAGATCATTTCGTGTGCCTTAAGCCCAGAGGAACTGAACAATCATCTTCATATACCAG TTTTGCTGATGCTGCATCTGCAACATTTTAAACAGTCTGGTGCAGTACTGCAGCCTTGTT AACCTGTGCAATTCAGCAGTACATAGAGCTAGAATGCTGATGCTACAACTGGCAAACAAC AGTTTTGTGCACGCAGCTGTGGGGTTTGCCTGGATAATTGAGTGGCATCTCCATGTACTG TATTCCAATTACTGATGTCTCAAGTATAGTGCTAGGTGGCATGAACTTTGCGGAAGAATT TGAGTACCTATATTTTGATGCTATAGATTGGCTTGGAGAAGGCTGAAAATTCATCTATTA ACACAAGTATCGCAAGAGCTGCAGGACTACAGGTCTTGCAGCCTGTACAGATGGTTGTGT TTTGTACACTAGAGGTGCAGTTTAGAAGAACAGAAAAATTCTTCTGTTCTTAGACATTGG AGTAACTTTTACCACACGATTGGCTTGTAACCTGTAAATAACTACTGCTTCAAATGAGCA CCTGTTCTTACAAATTTGATAATGTTGGGTGTCGGTCTGCACTGCAACATCCAAAAAACC TTTGTAAGTAAGCACATGTCAACAGCTTGAAATTCAACATACTTCTG