Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0339600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:9921060:9931420:-1 gene:Os10g0339600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,2-fucosidase. (Os10t0339600-01)
Sequence	ATGGACGGCGACGGCGAGTGGGTGTGGGTGCGGCGGCCGGCGGAGGCGGAGGCCGTGGCG GCGGCGGCGGGGTGGCCGACGGCGGAGGAGGAGGCGCGGCCGCTGGAGGTGGTGTTTGCG TCGCCGTCGAGGTACTTCACGGACGCGGCGCCCATCGGGAACGGCAGCCTCGGCGCCCTG GTGTGGGGCGGCGTCGCATCCGAGAAGCTACAGCTCAACCATGACACTCTATGGACGGGT GGACCTGGTAATTATACAAACCCAAAAGCACCTGCAGTTCTTTCTAAAGTAAGGGACCTT GTTAACAGGGGACAGTATGCTAAAGCCACGGCTGTTGCTTATGGCCTATCTGGTGACCAA ACACAGGTATACCAGCCTCTTGGTGATATTGATCTGGCCTTTGATGAACACGTGGAGGAC ACAAATTATAAAAGAAACCTAGATCTTCGAACAGCAACTGTTAATGTCTCTTACACCATT GGTGAGGTGGTCCACTCAAGGGAACACTTCTCATCAAATCCACATCAAGTCATCGTGACT AAAATATCTGCAGATAAACCTGGAAATGTCTCCTTTACAGTGTCTTTGACTACTCCATTG AACCACCAGATTCGTGTAACAAATGCAAACGAAATAATAATGGAAGGTTATTGCCCAGGA GAAAGGCCCACAGAATATGGCAATGCCTCTGATCATCCCGTTGGAATTAAGTTTTCTGCT ATTCTCTATCTGCAGATGAGTGGTTCCAATGGCACTGTGGAAATATTAAATGATAAGATG CTGAAACTTGTTGGTGCCGACTCAGCTGTGTTGCTCCTTGCAGCTGCTACTTCATTTGAA GGGCCATTTGTCAATCCTTCGGAATCTAAACTGGATCCAACTGCATCTGCTCTGACAACA CTAACTGTGGCAAGGAACATGTCATATTCACAGCTAAAAGCTTATCACGTGGATGATTAC CAGAATCTTTTCCAGCGAGTTTCCTTGCAACTTTCACGAGACTCTAATGATGCCCTTGGA GGGAATGGTTTAGTTAATTTACCTGAGAATAGCTTACAGGAAACCTCTGTATCTGATTAT GCTGTACAGATGGTAGAGTGCTCAAGATTTCAGGGGTTTAATAATTCAGGCAAGCCTACC GTAGACAGAATTCTAAGTTTTAGAGACGATGAAGATCCTTCTCTGGTGGAACTCCTGTTC CAATTTGGTCGTTATCTACTCATTTCTTGCTCAAGGCCTGGAACCCAGATTTCCAATCTT CAAGGAATATGGAATGATGAAACTTCACCACCATGGGATGCAGCTCCCCATCCAAATATA AATCTACAAATGAATTATTGGCCGGCACTTCCTTGCAACCTTAGCGAATGCCAAGAACCA CTATTCGACTTCATTGGATCTCTTTCAGTTAATGGAGCTAAGACAGCAAAAGTAAATTAT GAAGCTAGCGGTTGGGTCAGTCATCAAGTGACTGACCTGTGGGCTAAAACATCACCAGAT GCTGGTGACCCTATGTGGGCCTTATGGCCAATGGGTGGGCCATGGCTTGCCACACACCTG TGGGAGCATTACAGTTATACGATGGACAAACAATTTTTGGAGAAAACAGCATATCCCCTT TTGGAAGGGTCTGCATCATTTCTGTTGGACTGGTTGATTGAGGGAAATGGAGATTATTTG GAGACCAATCCTTCCACTTCTCCAGAGCATTATTTCATTGCTCCAGATGGTAGGAAGGCC TGCGTGAGCTACTCAACAACTATGGACATGTCAATTATAAGAGAAGTTTTCTCAGCTGTT CTTATGTCTTCAGATATTTTAGGAAAGTCAGACTCAGACATGGTTCAGAGAATCAAAAAA GCAATACCAAGGCTCCCACCAATAAAAGTTGCAAGAGATGGTACAATCATGGAGTGGGCA CAGGATTTTCAGGATCCTGAAGTTCACCACAGACATGTATCTCACCTGTTTGGTCTTTAT CCAGGACATACTATGTCACTTGAGAAAACACCTGACCTTTGCAAAGCCGTTGCAAATAGT CTCTATAAAAGAGGTGATGAAGGTCCTGGGTGGTCCACTTCCTGGAAGATGGCCCTTTGG GCCCATCTTCATAACAGTGAGCATGCATATAAAATGATTCTTCAGCTGATCACTTTGGTA GATCCAAAACATGAGGTTGAAAAGGAAGGAGGCCTATACTGCAATCTGTTCACAGCACAC CCACCTTTCCAAATTGATGCAAATTTTGGATTCCCTGCTGCACTGTCAGAAATGCTGGTA CAGAGCACCGGGAGCGACTTGTACTTGCTCCCTGCCTTACCCCGTGATAAGTGGCCTCAA GGTTGTGTGAAAGGTCTCAAGGCCCGAGGCGGTGTGACCATCAACATCAGGTGGGAGGAA GGTAGCCTCCATGAAGCTCTGCTTTGGTCCAGCAGCAGCCAGAATTCACGTATCAAGCTG CACTATGGAGATCAGGTTGGGACGATCAGTGTCTCGCCTTGTCAAGTTTACAGGTTCAGC AAGGATCTGAAGTGCTTGAAGACTTGGGCTCTCTGA

Peptide Sequence

PEP ID	Os10t0339600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:9921060:9931420:-1 gene:Os10g0339600 transcript:Os10t0339600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,2-fucosidase. (Os10t0339600-01)
Sequence	MDGDGEWVWVRRPAEAEAVAAAAGWPTAEEEARPLEVVFASPSRYFTDAAPIGNGSLGAL VWGGVASEKLQLNHDTLWTGGPGNYTNPKAPAVLSKVRDLVNRGQYAKATAVAYGLSGDQ TQVYQPLGDIDLAFDEHVEDTNYKRNLDLRTATVNVSYTIGEVVHSREHFSSNPHQVIVT KISADKPGNVSFTVSLTTPLNHQIRVTNANEIIMEGYCPGERPTEYGNASDHPVGIKFSA ILYLQMSGSNGTVEILNDKMLKLVGADSAVLLLAAATSFEGPFVNPSESKLDPTASALTT LTVARNMSYSQLKAYHVDDYQNLFQRVSLQLSRDSNDALGGNGLVNLPENSLQETSVSDY AVQMVECSRFQGFNNSGKPTVDRILSFRDDEDPSLVELLFQFGRYLLISCSRPGTQISNL QGIWNDETSPPWDAAPHPNINLQMNYWPALPCNLSECQEPLFDFIGSLSVNGAKTAKVNY EASGWVSHQVTDLWAKTSPDAGDPMWALWPMGGPWLATHLWEHYSYTMDKQFLEKTAYPL LEGSASFLLDWLIEGNGDYLETNPSTSPEHYFIAPDGRKACVSYSTTMDMSIIREVFSAV LMSSDILGKSDSDMVQRIKKAIPRLPPIKVARDGTIMEWAQDFQDPEVHHRHVSHLFGLY PGHTMSLEKTPDLCKAVANSLYKRGDEGPGWSTSWKMALWAHLHNSEHAYKMILQLITLV DPKHEVEKEGGLYCNLFTAHPPFQIDANFGFPAALSEMLVQSTGSDLYLLPALPRDKWPQ GCVKGLKARGGVTINIRWEEGSLHEALLWSSSSQNSRIKLHYGDQVGTISVSPCQVYRFS KDLKCLKTWAL

Transcript Sequence

Transcript ID	Os10t0339600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:9921060:9931420:-1 gene:Os10g0339600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,2-fucosidase. (Os10t0339600-01)
Sequence	GGCTGCGGGGGCTCGTCGGCTAGTCGGCTCGGCTCGGCTCGTTCCCGATGGACGGCGACG GCGAGTGGGTGTGGGTGCGGCGGCCGGCGGAGGCGGAGGCCGTGGCGGCGGCGGCGGGGT GGCCGACGGCGGAGGAGGAGGCGCGGCCGCTGGAGGTGGTGTTTGCGTCGCCGTCGAGGT ACTTCACGGACGCGGCGCCCATCGGGAACGGCAGCCTCGGCGCCCTGGTGTGGGGCGGCG TCGCATCCGAGAAGCTACAGCTCAACCATGACACTCTATGGACGGGTGGACCTGGTAATT ATACAAACCCAAAAGCACCTGCAGTTCTTTCTAAAGTAAGGGACCTTGTTAACAGGGGAC AGTATGCTAAAGCCACGGCTGTTGCTTATGGCCTATCTGGTGACCAAACACAGGTATACC AGCCTCTTGGTGATATTGATCTGGCCTTTGATGAACACGTGGAGGACACAAATTATAAAA GAAACCTAGATCTTCGAACAGCAACTGTTAATGTCTCTTACACCATTGGTGAGGTGGTCC ACTCAAGGGAACACTTCTCATCAAATCCACATCAAGTCATCGTGACTAAAATATCTGCAG ATAAACCTGGAAATGTCTCCTTTACAGTGTCTTTGACTACTCCATTGAACCACCAGATTC GTGTAACAAATGCAAACGAAATAATAATGGAAGGTTATTGCCCAGGAGAAAGGCCCACAG AATATGGCAATGCCTCTGATCATCCCGTTGGAATTAAGTTTTCTGCTATTCTCTATCTGC AGATGAGTGGTTCCAATGGCACTGTGGAAATATTAAATGATAAGATGCTGAAACTTGTTG GTGCCGACTCAGCTGTGTTGCTCCTTGCAGCTGCTACTTCATTTGAAGGGCCATTTGTCA ATCCTTCGGAATCTAAACTGGATCCAACTGCATCTGCTCTGACAACACTAACTGTGGCAA GGAACATGTCATATTCACAGCTAAAAGCTTATCACGTGGATGATTACCAGAATCTTTTCC AGCGAGTTTCCTTGCAACTTTCACGAGACTCTAATGATGCCCTTGGAGGGAATGGTTTAG TTAATTTACCTGAGAATAGCTTACAGGAAACCTCTGTATCTGATTATGCTGTACAGATGG TAGAGTGCTCAAGATTTCAGGGGTTTAATAATTCAGGCAAGCCTACCGTAGACAGAATTC TAAGTTTTAGAGACGATGAAGATCCTTCTCTGGTGGAACTCCTGTTCCAATTTGGTCGTT ATCTACTCATTTCTTGCTCAAGGCCTGGAACCCAGATTTCCAATCTTCAAGGAATATGGA ATGATGAAACTTCACCACCATGGGATGCAGCTCCCCATCCAAATATAAATCTACAAATGA ATTATTGGCCGGCACTTCCTTGCAACCTTAGCGAATGCCAAGAACCACTATTCGACTTCA TTGGATCTCTTTCAGTTAATGGAGCTAAGACAGCAAAAGTAAATTATGAAGCTAGCGGTT GGGTCAGTCATCAAGTGACTGACCTGTGGGCTAAAACATCACCAGATGCTGGTGACCCTA TGTGGGCCTTATGGCCAATGGGTGGGCCATGGCTTGCCACACACCTGTGGGAGCATTACA GTTATACGATGGACAAACAATTTTTGGAGAAAACAGCATATCCCCTTTTGGAAGGGTCTG CATCATTTCTGTTGGACTGGTTGATTGAGGGAAATGGAGATTATTTGGAGACCAATCCTT CCACTTCTCCAGAGCATTATTTCATTGCTCCAGATGGTAGGAAGGCCTGCGTGAGCTACT CAACAACTATGGACATGTCAATTATAAGAGAAGTTTTCTCAGCTGTTCTTATGTCTTCAG ATATTTTAGGAAAGTCAGACTCAGACATGGTTCAGAGAATCAAAAAAGCAATACCAAGGC TCCCACCAATAAAAGTTGCAAGAGATGGTACAATCATGGAGTGGGCACAGGATTTTCAGG ATCCTGAAGTTCACCACAGACATGTATCTCACCTGTTTGGTCTTTATCCAGGACATACTA TGTCACTTGAGAAAACACCTGACCTTTGCAAAGCCGTTGCAAATAGTCTCTATAAAAGAG GTGATGAAGGTCCTGGGTGGTCCACTTCCTGGAAGATGGCCCTTTGGGCCCATCTTCATA ACAGTGAGCATGCATATAAAATGATTCTTCAGCTGATCACTTTGGTAGATCCAAAACATG AGGTTGAAAAGGAAGGAGGCCTATACTGCAATCTGTTCACAGCACACCCACCTTTCCAAA TTGATGCAAATTTTGGATTCCCTGCTGCACTGTCAGAAATGCTGGTACAGAGCACCGGGA GCGACTTGTACTTGCTCCCTGCCTTACCCCGTGATAAGTGGCCTCAAGGTTGTGTGAAAG GTCTCAAGGCCCGAGGCGGTGTGACCATCAACATCAGGTGGGAGGAAGGTAGCCTCCATG AAGCTCTGCTTTGGTCCAGCAGCAGCCAGAATTCACGTATCAAGCTGCACTATGGAGATC AGGTTGGGACGATCAGTGTCTCGCCTTGTCAAGTTTACAGGTTCAGCAAGGATCTGAAGT GCTTGAAGACTTGGGCTCTCTGAGAATGTACAGTTGCTGGTTTTGAAAGGGGAAGCTAAC TCGGGGGTAACTCGCCAAATCTCCCGAGCCAACTGCCAATAAATAAATCTCGTTAGTTCT TGCACATATCGAACTTGTTTCTCTGCATTTGTTTCAGCATTCCCTTGAGCAACTATGCAA ATAAGCGTCATGCGGATTTCATTGTGTACTAGTTGAGTCTGTGTGTTGGTGTAAATTTTG GTGTTGAAATAACCTATAAATGCACACAAAATATGTGCTACTTTCT