Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0339290-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:9861344:9867991:-1 gene:Os10g0339290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,2-fucosidase. (Os10t0339290-01);Similar to Alpha-1,2-fucosidase. (Os10t0339290-02)
Sequence	ATGGACGGCGACGGCTGGGTCTGGGTGCGGCGGCCGGCCGACGACGACGAGGAGGAGCGG CCGCTGAAGGTGGTGTTCGACTCCCCGGCCGAGCACTTCACGGACGCGGCGCCCATCGGG AACGGCAGCCTCGGAGCCATGGTCTGGGGCAGCGTCGCCTCCGAGAAGCTCCAGCTCAAC CATGATACCCTTTGGACCGGCGTGCCTGGGAACTACACTGACCCAAATGCGCCATACGCA CTCGCTGTTGTGAGGAAGCTCGTTGATGGAGAGAAGTTTGTTGATGCTACAGAGGCTGCC TCTGGCCTTTTCGGTGGTCCAACAGAGGTTTACCAACCTCTTGGAGACATAAATCTGGAG TTTGACTCATCTAGTCTGGGGTATACTTCTTACAAAAGAGAGCTAGATCTACGTACTGCA ACTGTTTGCATCAGCTATAATATTGGGGAAGTTCAGTACAGTAGAGAGCACTTCTGCTCA AATCCACACCAGGTTTTTGCCACCAAGATCTCTGCTAACAAATCAGGACATGTTTCTTTC ACTTTATCCTTAAACAGTCAACTAAACCACAATGTTCGGATAACAAATGCAAATGAGATG ATTATGCAAGGTACATGTCCAGGACGAAGACCTGCACTGCATCACAATGGGGCCAACGAT GCTATTGGCATCAAGTTTGCAACTGCTGTTGGGCTGCAGATTGGTGGCACTTCCGCAAAA GTCACAATTATTGATGATCAAAAGTTAAGAATTGATGCTGCAGATTGGGTTGTTTTGCTG GTTGCAGCTGCTTCCTCATTCGATGGGCCTTTCGTGAATCCTTCAGAGTCAAAATTAAAC CCTGAAGTAGCTGCTCTAAATACATTGAATATCAGCAGGAATGCTACATTTTCTCAGCTC AAAGCTGCTCATTTGGAAGATTATCAGGGTCTTTTTCACCGTGTAACTCTGCAACTATCG CAAGCATCAATGCTTGAGAAAGATATCTTGGAAGAAGTTGATCATGACGTAAAGACTACA GCAGAAAGAATTAATTCCTTTAGAAGCGATGAGGATCCTTCTTTGGTCGAATTGTTATTT CAGTATGGTCGCTACCTGCTCATTTCCTCCTCTCGGCCTGGGACACAGGTATCTAATCTG CAAGGAATATGGAACCAAGATTTTGCACCTGCTTGGGAGGCTTCTCCTCACCTGAACATA AACCTTGAGATGAATTACTGGCCAACACTTCCTTGTAACCTTACTGAATGCCAAGAACCA CTATTTGACTTGATAGGATCTCTTGCGGTTAATGGAACAAAAACAGCAAAAGTCAATTAC CAAGCGAGTGGCTGGGTAACTCATCACGTCACGGACATATGGGCAAAATCATCTGCATAT TACGTAGATGCGATGTATGCATTGTGGCCAATGGGGGGTGCCTGGCTGTGTACACATCTT TGGGAAAACTACCAGTATTCACTGGACAAAGAATTTTTGGAGAAAAGAGCATATCCATTA CTGGAGGGATGTGCAATGTTTTTAATTGATTGGTTGATCAAGGGACCAGGAGACTATTTG GAAACAAATCCATCTACTTCTCCAGAGCATCCTTTCATAGCTCCTGGTACTGGTGGTCAC CTTGCTAGTGTGAGCTATTCAACTACAATGGACATCTCTATTATCCGTGAAGTTTTCCTG GCTGTCATTTCGTCTGCAGAGGTCTTGGGAAAATCTGATACTAATCTGGTTGAAAGGATC AAGAAGGCACTCCCAATGCTCCCTCCAGTTAAAATTTCTAAAGATGGCACGATCATGGAA TGGGCACAAGATTTCGAGGACCCAGAAGTCCATCATAGACACCTGTCACATCTGTTTGGT CTTTACCCTGGTCATACTATAACCATGCAGAAAAATCCTGAGGTTTGCAAAGCTGTTGCC AATAGTCTCCACAAACGAGGGGAAGATGGCCCTGGATGGTCGACCACATGGAAGATGGCA CTGTGGGCACGCCTTCTGAATAGTGAGAATGCATACAGGATGATCCTAAAGTTGATCACC TTGGTTCCTCCTGGTGGCAAGGTTGACTTTGAGGGAGGATTGTATACCAATCTTTGGACA GCACACCCACCCTTCCAAATTGATGCAAATTTTGGATTCACAGCTGCAATTGCTGAAATG CTGCTCCAGAGCACCCATGGTGATGCTGATCTCTACTTGCTACCAGCACTGCCGCGCGAA AAGTGGCCCAAAGGCTACGTGAAGGGATTGAGGGCTCGCGGCAATGTGACTGTGAACATC AGCTGGGAGAAAGGGGAGCTGCAAGAAGCAACGGTGTGGTCTAGCAACCCAAAATGCACC CTGAGGCTGCACTACGGTGAACAAGTTGCTATGGTGACAGTTTTAGGGGGCAATGTTTAC AGGTTCAATGGGGGTTTGCAGTGCGTGGAGACATACATGGCCCCTTGA

Peptide Sequence

PEP ID	Os10t0339290-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:9861344:9867991:-1 gene:Os10g0339290 transcript:Os10t0339290-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,2-fucosidase. (Os10t0339290-01);Similar to Alpha-1,2-fucosidase. (Os10t0339290-02)
Sequence	MDGDGWVWVRRPADDDEEERPLKVVFDSPAEHFTDAAPIGNGSLGAMVWGSVASEKLQLN HDTLWTGVPGNYTDPNAPYALAVVRKLVDGEKFVDATEAASGLFGGPTEVYQPLGDINLE FDSSSLGYTSYKRELDLRTATVCISYNIGEVQYSREHFCSNPHQVFATKISANKSGHVSF TLSLNSQLNHNVRITNANEMIMQGTCPGRRPALHHNGANDAIGIKFATAVGLQIGGTSAK VTIIDDQKLRIDAADWVVLLVAAASSFDGPFVNPSESKLNPEVAALNTLNISRNATFSQL KAAHLEDYQGLFHRVTLQLSQASMLEKDILEEVDHDVKTTAERINSFRSDEDPSLVELLF QYGRYLLISSSRPGTQVSNLQGIWNQDFAPAWEASPHLNINLEMNYWPTLPCNLTECQEP LFDLIGSLAVNGTKTAKVNYQASGWVTHHVTDIWAKSSAYYVDAMYALWPMGGAWLCTHL WENYQYSLDKEFLEKRAYPLLEGCAMFLIDWLIKGPGDYLETNPSTSPEHPFIAPGTGGH LASVSYSTTMDISIIREVFLAVISSAEVLGKSDTNLVERIKKALPMLPPVKISKDGTIME WAQDFEDPEVHHRHLSHLFGLYPGHTITMQKNPEVCKAVANSLHKRGEDGPGWSTTWKMA LWARLLNSENAYRMILKLITLVPPGGKVDFEGGLYTNLWTAHPPFQIDANFGFTAAIAEM LLQSTHGDADLYLLPALPREKWPKGYVKGLRARGNVTVNISWEKGELQEATVWSSNPKCT LRLHYGEQVAMVTVLGGNVYRFNGGLQCVETYMAP

Transcript Sequence

Transcript ID	Os10t0339290-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:9861344:9867991:-1 gene:Os10g0339290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alpha-1,2-fucosidase. (Os10t0339290-01);Similar to Alpha-1,2-fucosidase. (Os10t0339290-02)
Sequence	CTGCCTCACTCCCTCCCTTCTCAACCCGGATTCCACCTCTCCTCCGCCCGCCACCCACCG CGTTCTCTCCCATGGACGGCGACGGCTGGGTCTGGGTGCGGCGGCCGGCCGACGACGACG AGGAGGAGCGGCCGCTGAAGGTGGTGTTCGACTCCCCGGCCGAGCACTTCACGGACGCGG CGCCCATCGGGAACGGCAGCCTCGGAGCCATGGTCTGGGGCAGCGTCGCCTCCGAGAAGC TCCAGCTCAACCATGATACCCTTTGGACCGGCGTGCCTGGGAACTACACTGACCCAAATG CGCCATACGCACTCGCTGTTGTGAGGAAGCTCGTTGATGGAGAGAAGTTTGTTGATGCTA CAGAGGCTGCCTCTGGCCTTTTCGGTGGTCCAACAGAGGTTTACCAACCTCTTGGAGACA TAAATCTGGAGTTTGACTCATCTAGTCTGGGGTATACTTCTTACAAAAGAGAGCTAGATC TACGTACTGCAACTGTTTGCATCAGCTATAATATTGGGGAAGTTCAGTACAGTAGAGAGC ACTTCTGCTCAAATCCACACCAGGTTTTTGCCACCAAGATCTCTGCTAACAAATCAGGAC ATGTTTCTTTCACTTTATCCTTAAACAGTCAACTAAACCACAATGTTCGGATAACAAATG CAAATGAGATGATTATGCAAGGTACATGTCCAGGACGAAGACCTGCACTGCATCACAATG GGGCCAACGATGCTATTGGCATCAAGTTTGCAACTGCTGTTGGGCTGCAGATTGGTGGCA CTTCCGCAAAAGTCACAATTATTGATGATCAAAAGTTAAGAATTGATGCTGCAGATTGGG TTGTTTTGCTGGTTGCAGCTGCTTCCTCATTCGATGGGCCTTTCGTGAATCCTTCAGAGT CAAAATTAAACCCTGAAGTAGCTGCTCTAAATACATTGAATATCAGCAGGAATGCTACAT TTTCTCAGCTCAAAGCTGCTCATTTGGAAGATTATCAGGGTCTTTTTCACCGTGTAACTC TGCAACTATCGCAAGCATCAATGCTTGAGAAAGATATCTTGGAAGAAGTTGATCATGACG TAAAGACTACAGCAGAAAGAATTAATTCCTTTAGAAGCGATGAGGATCCTTCTTTGGTCG AATTGTTATTTCAGTATGGTCGCTACCTGCTCATTTCCTCCTCTCGGCCTGGGACACAGG TATCTAATCTGCAAGGAATATGGAACCAAGATTTTGCACCTGCTTGGGAGGCTTCTCCTC ACCTGAACATAAACCTTGAGATGAATTACTGGCCAACACTTCCTTGTAACCTTACTGAAT GCCAAGAACCACTATTTGACTTGATAGGATCTCTTGCGGTTAATGGAACAAAAACAGCAA AAGTCAATTACCAAGCGAGTGGCTGGGTAACTCATCACGTCACGGACATATGGGCAAAAT CATCTGCATATTACGTAGATGCGATGTATGCATTGTGGCCAATGGGGGGTGCCTGGCTGT GTACACATCTTTGGGAAAACTACCAGTATTCACTGGACAAAGAATTTTTGGAGAAAAGAG CATATCCATTACTGGAGGGATGTGCAATGTTTTTAATTGATTGGTTGATCAAGGGACCAG GAGACTATTTGGAAACAAATCCATCTACTTCTCCAGAGCATCCTTTCATAGCTCCTGGTA CTGGTGGTCACCTTGCTAGTGTGAGCTATTCAACTACAATGGACATCTCTATTATCCGTG AAGTTTTCCTGGCTGTCATTTCGTCTGCAGAGGTCTTGGGAAAATCTGATACTAATCTGG TTGAAAGGATCAAGAAGGCACTCCCAATGCTCCCTCCAGTTAAAATTTCTAAAGATGGCA CGATCATGGAATGGGCACAAGATTTCGAGGACCCAGAAGTCCATCATAGACACCTGTCAC ATCTGTTTGGTCTTTACCCTGGTCATACTATAACCATGCAGAAAAATCCTGAGGTTTGCA AAGCTGTTGCCAATAGTCTCCACAAACGAGGGGAAGATGGCCCTGGATGGTCGACCACAT GGAAGATGGCACTGTGGGCACGCCTTCTGAATAGTGAGAATGCATACAGGATGATCCTAA AGTTGATCACCTTGGTTCCTCCTGGTGGCAAGGTTGACTTTGAGGGAGGATTGTATACCA ATCTTTGGACAGCACACCCACCCTTCCAAATTGATGCAAATTTTGGATTCACAGCTGCAA TTGCTGAAATGCTGCTCCAGAGCACCCATGGTGATGCTGATCTCTACTTGCTACCAGCAC TGCCGCGCGAAAAGTGGCCCAAAGGCTACGTGAAGGGATTGAGGGCTCGCGGCAATGTGA CTGTGAACATCAGCTGGGAGAAAGGGGAGCTGCAAGAAGCAACGGTGTGGTCTAGCAACC CAAAATGCACCCTGAGGCTGCACTACGGTGAACAAGTTGCTATGGTGACAGTTTTAGGGG GCAATGTTTACAGGTTCAATGGGGGTTTGCAGTGCGTGGAGACATACATGGCCCCTTGAC AATTGAACGCCCTCTGCATTTCAGTGTTTACGGTTTTTCATCGTTTTAGAGTATTTTGTG TGGACATGATGATGAATTGATGCGTGCATTGGAATAATTTGCTTTTGTAAAAGATGGTGC ATGCTCTTCAAGATAGTCAAGGAGCTGTGCATGGATGTCTCTGCTGTATATGGCTATGAT GTAGTATTGATTTCTGGTGTATGGCAACTTTATCTGTTGTAT