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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0335200-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:9624759:9628262:1 gene:Os10g0335200 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease domain containing protein. (Os10t0335200-01);HNH endonuclease domain containing protein. (Os10t0335200-02)
Sequence

ATGGCTCCCTCCTCTCCCCGCCGCGACCTCGACGGCGAGGGGACCGGCGGCGGGAGCTCG
GCGGCGAGGGAGAAGGAGCGGCCGAGGTCCTTCGACGAGAAGACCCGGTCGGCGTGCTGG
CGGAAGGCGGCGGTGGTGATGGGCCGGCACCCGGAGCGGTGGCGGCAGGACGCCGCCGGC
AACGTCGTGTGCCGCCGCTTCTGGAGCTGCCACGGCTGCCTCTGCTACGAGTACGACCAC
ATCGTCCCCTTCTCCAAAGGAGGGGAGTCTACTGTTGACAATTGCCAGATTCTTCAGACA
AGGGTGAATCGGTCAAAATCTGATAAAGCATGGATAGAGCAGGCAGAAATGCAGGGATTT
TCTTGTGATATCAAGTTCACTGATAAAGAACTTGATGTGATTGAAATGGCTGTCTATGGG
GATGTCATCCGTCCTGGAAAGCAATGTCGCTGCAGGACAGTAGCTGAGATGCTTGGGAAG
GTGAAGTCAAAGAATCAGATGGCTGCTTGCGAGTTGCCACATAATGATGCCTCCTAG

Peptide Sequence

PEP ID

Os10t0335200-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:9624759:9628262:1 gene:Os10g0335200 transcript:Os10t0335200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease domain containing protein. (Os10t0335200-01);HNH endonuclease domain containing protein. (Os10t0335200-02)
Sequence

MAPSSPRRDLDGEGTGGGSSAAREKERPRSFDEKTRSACWRKAAVVMGRHPERWRQDAAG
NVVCRRFWSCHGCLCYEYDHIVPFSKGGESTVDNCQILQTRVNRSKSDKAWIEQAEMQGF
SCDIKFTDKELDVIEMAVYGDVIRPGKQCRCRTVAEMLGKVKSKNQMAACELPHNDAS

Transcript Sequence

Transcript ID

Os10t0335200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:9624759:9628262:1 gene:Os10g0335200 gene_biotype:protein_coding transcript_biotype:protein_coding description:HNH endonuclease domain containing protein. (Os10t0335200-01);HNH endonuclease domain containing protein. (Os10t0335200-02)
Sequence

AAATGAAAACGCGAATATACCAGCCGAAAGTAAAGCTGCGGCGGCTGGGGTGAATGGCTC
CCTCCTCTCCCCGCCGCGACCTCGACGGCGAGGGGACCGGCGGCGGGAGCTCGGCGGCGA
GGGAGAAGGAGCGGCCGAGGTCCTTCGACGAGAAGACCCGGTCGGCGTGCTGGCGGAAGG
CGGCGGTGGTGATGGGCCGGCACCCGGAGCGGTGGCGGCAGGACGCCGCCGGCAACGTCG
TGTGCCGCCGCTTCTGGAGCTGCCACGGCTGCCTCTGCTACGAGTACGACCACATCGTCC
CCTTCTCCAAAGGAGGGGAGTCTACTGTTGACAATTGCCAGATTCTTCAGACAAGGGTGA
ATCGGTCAAAATCTGATAAAGCATGGATAGAGCAGGCAGAAATGCAGGGATTTTCTTGTG
ATATCAAGTTCACTGATAAAGAACTTGATGTGATTGAAATGGCTGTCTATGGGGATGTCA
TCCGTCCTGGAAAGCAATGTCGCTGCAGGACAGTAGCTGAGATGCTTGGGAAGGTGAAGT
CAAAGAATCAGATGGCTGCTTGCGAGTTGCCACATAATGATGCCTCCTAGCATAAGTCAT
ATCGTTCTGCACAACTACACCAGATTCATTATGGTCCGCACGGGCAGCAAGCCTGAGATC
ACTACCCTGATTTCATGCTCTATTGTGATAATGAACATATTTGACTTTAGGATCTCTTAC
ATTGGTTGTAACACCGTTACACCAACATGGTGTGCTAGGTTAGATCAGTTCCGTGTTGAT
TTGTGCAATTGGACTGGCTAGTTCGGTTCCTTTC