Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0330300-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:9330650:9336460:1 gene:Os10g0330300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0330300-01)
Sequence

ATGGAAGGGGATACTTTGTTAGCTGACATACAACTGGCACTTCCAAATAGGTGCTATTTG
TTACCTTCAGGCATGCACAAATCTAATACATCATCATGTCCTACTATCACATGTGAAGAA
GCTCTTAAGAGGGAGTTGGAGTATCGGCAAAAAATTGAAAGGAGTCATCCACATCTGCTG
GTTGGCCTTAATGGATCCCCTGCATTGCTGAATGAGGTTGGATCTGGTTCATCACCTGAT
TTGTCAATGAGGAACTCAGCCCATGACAGCTATATGCCCTCACCACAGGCATGTTTTGTT
GGTTCCACTGTACAAAGACCACCAGCAAATTGGTACCCCTCAAAGAAAAAGTTGAAAGTT
CTACAGCATCCTTCACAGGCTTTGCAGGCCCCCAGGCCAAATTTGATACCTTCCTTTTGG
TGCAAAATTTGTAAGGTGGATTGTGTTACAGAATTTAATTTTGGTGCCCATATTGGAGGA
AAAAAACACAAGGCAAAAAAGCTGGAGATTCTTGGTAATAGAAACAATGCAAGACCTGCC
ACTGGCAATCAATGTACAGGTAATAGAAATCCCAGACCAAATGGCAACGCAGGTTCTGGA
AGCAGAAACAATGAACCAAATGTGTTTAATAGCAATATTGCCCAACCAAGCAGTGACACT
TTCTCTGGAAGTCAAACCAACGGAACAATTGGAAATCCTCACAAGGAAATGTCATCTGAT
GGTGATGGAATAAGCAATAGCAAACTAGAGCAAAATTGCTGA

Peptide Sequence

PEP ID

Os10t0330300-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:9330650:9336460:1 gene:Os10g0330300 transcript:Os10t0330300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0330300-01)
Sequence

MEGDTLLADIQLALPNRCYLLPSGMHKSNTSSCPTITCEEALKRELEYRQKIERSHPHLL
VGLNGSPALLNEVGSGSSPDLSMRNSAHDSYMPSPQACFVGSTVQRPPANWYPSKKKLKV
LQHPSQALQAPRPNLIPSFWCKICKVDCVTEFNFGAHIGGKKHKAKKLEILGNRNNARPA
TGNQCTGNRNPRPNGNAGSGSRNNEPNVFNSNIAQPSSDTFSGSQTNGTIGNPHKEMSSD
GDGISNSKLEQNC

Transcript Sequence

Transcript ID

Os10t0330300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:9330650:9336460:1 gene:Os10g0330300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0330300-01)
Sequence

AGCCCAAAAATCTCCCGTCTCGGCGTCTCGGCTCCTCCGCTCCTTGCGCCATCTCGCGGC
TGAACAGGCGAGGGGAGGGCGCGCCGATCTCCATCCGGCGAGCAGGGGAGGGGAGGGTCG
CTGATCTCCATCTGGCGAGTAGAGCAGGCGAGGGGAGGGGAGGGGATCCGATCGATGATT
CCACAAAATGCAGCTTTGGACCATATAAGCACACCTTCAGAAAGTGGTGAAATACCTTTG
GTTATAAATGTTGAAAGTCAGCACATTTTTTGACGATTCTATGGCATGGAAGGGGATACT
TTGTTAGCTGACATACAACTGGCACTTCCAAATAGGTGCTATTTGTTACCTTCAGGCATG
CACAAATCTAATACATCATCATGTCCTACTATCACATGTGAAGAAGCTCTTAAGAGGGAG
TTGGAGTATCGGCAAAAAATTGAAAGGAGTCATCCACATCTGCTGGTTGGCCTTAATGGA
TCCCCTGCATTGCTGAATGAGGTTGGATCTGGTTCATCACCTGATTTGTCAATGAGGAAC
TCAGCCCATGACAGCTATATGCCCTCACCACAGGCATGTTTTGTTGGTTCCACTGTACAA
AGACCACCAGCAAATTGGTACCCCTCAAAGAAAAAGTTGAAAGTTCTACAGCATCCTTCA
CAGGCTTTGCAGGCCCCCAGGCCAAATTTGATACCTTCCTTTTGGTGCAAAATTTGTAAG
GTGGATTGTGTTACAGAATTTAATTTTGGTGCCCATATTGGAGGAAAAAAACACAAGGCA
AAAAAGCTGGAGATTCTTGGTAATAGAAACAATGCAAGACCTGCCACTGGCAATCAATGT
ACAGGTAATAGAAATCCCAGACCAAATGGCAACGCAGGTTCTGGAAGCAGAAACAATGAA
CCAAATGTGTTTAATAGCAATATTGCCCAACCAAGCAGTGACACTTTCTCTGGAAGTCAA
ACCAACGGAACAATTGGAAATCCTCACAAGGAAATGTCATCTGATGGTGATGGAATAAGC
AATAGCAAACTAGAGCAAAATTGCTGATACTGGATCATCTGAACACAAGTGATGAATAAA
GATACTTGAAGCTTATGGTTGAACCGGTTATAGCATACTTCAGGAACATCTTCCCAGTTG
TCCCCATGTGTGTGTCATGCCACAAGTGCAGCCAAGGATTTGAGCACCACACTTTGGGCA
AAGAAACGGGAGGTACTGCAGCTGAACTGTGGCGTGCTGTCATTCAGTAAAGAAACAAAC
TTGGCTGGAACCAAACAGGTCTTTAACCTGCTGATGTACATAGTTTTCTCTTTACACTAG
TTGTCTTATTTTTTGTTGCAAATCATGTAGAAATAAAAAAAAATCCTTGCTTGGATGATG
GTATCTTGCATGCTTTAGCTTGAATTGCTCTGGAAATTTTATCTGGTCAGTAAGACAGTT
TCTGGTTATCACTCTTCTGTCTTCTCCAGTTTTCTTTGGTCATAATTTTGCTTTTAGTTT
GTATAGTTCAAATATCATAATTTATTGCAATGTACCTTTGATATT