Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0329300-03
CDS Infomation	cds chromosome:IRGSP-1.0:10:9258892:9261262:1 gene:Os10g0329300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-01);Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-02);Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-03)
Sequence	ATGGAGGTTTGCGCCGCCCGCGCCCCAGGCAAGATTATCCTTGCCGGCGAGCACGCCGTC GTCCATGGCTCAGCCGCCGTCGCCGCCGCCATCGACCTCTACACGCGCTGCTCCCTCTGC CTCATGCCCCTCGCTGACGACGAGGCGGCCGCCACGTTGGAGCTGGACCTCAAGGATCCT GGCCTCACCTTCTCGTGGCCGTGCGGGCGCCTCCGCGAGGTGCTGCTGACAGATGAGGCG GCGGGGGCACGGGAGGCGAGGCCATGCTCCCCGGACCGGCTGGCCTCCATTGCCAGGCTC TTGGAGGAGCACGAGATCCCTGAGGCCAAGATCTGGCTCTCCGCCGGTCTCTCTGCCTTC CTCTTCCTCTACACCTCCATATTGGGGTGTAGACCCGGGAAGGTGACGGTGAGCTCGGAC CTGCCCATGGGGTCGGGGCTTGGGTCATCGGCCGCCTTCTGCGTGTCGATGTCGGGGGTG TTGCTGACAGCTGCCGGCGTGGTTACTGCAGTCGGCGGCATCAGCGGCGAGGGCATGGGG TGGGAGTTGGTCGGGAAGGATGATCTTGAGCTAGTTAACCGGTGGGCTTTCCAGGGGGAG AAGATTATCCATGGGAAGCCTTCTGGCATCGACAATGCTGTCAGCACTTTCGGAAGCATG ATCAAATTCAAGAAAGGGGAATTGACAAACCTTAAATCTAGCAACCCAGTGAAAATGCTT ATTACGGATACAAGAGTTGGTAGGAACACAAAGGCTCTGGTTGCTGGTGTCTCTGAAAGA GCCTCCAGGCATTCAGATGCTATGGCTTCTGTATTCAACGCAGTGAACTCCATTAGTGAA GAGGTGTCAAGCATTGTTGAGTTAGCAGCTAATGATGAGATAGCTATCACCTCAAAGGAG GAAAAGCTGGCGGAACTCATGGAGATGAACCAAGGTTTGCTTCAGTGCATGGGTGTTAGC CATTCTTCAATAGAAACTGTACTGCGGACAACATTGAAATTCAACTTGGTCTCCAAGTTA ACAGGAGCTGGAGGTGGTGGTTGTGTTTTGACCCTGATACCAACTATGCTATCCAACTTA GTTCTGGAGAAAGTCATTGCAGAGCTGGAGTCGCATAGTTTTCGCTGCTTTAAAGTTGAG GTTGGTGGACAGGGTCTTCAAGTTTGCCAAGGAGGCTGCTCCTATTTTAATGGAGATGTT GTATAA

Peptide Sequence

PEP ID	Os10t0329300-03
PEP Infomation	pep chromosome:IRGSP-1.0:10:9258892:9261262:1 gene:Os10g0329300 transcript:Os10t0329300-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-01);Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-02);Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-03)
Sequence	MEVCAARAPGKIILAGEHAVVHGSAAVAAAIDLYTRCSLCLMPLADDEAAATLELDLKDP GLTFSWPCGRLREVLLTDEAAGAREARPCSPDRLASIARLLEEHEIPEAKIWLSAGLSAF LFLYTSILGCRPGKVTVSSDLPMGSGLGSSAAFCVSMSGVLLTAAGVVTAVGGISGEGMG WELVGKDDLELVNRWAFQGEKIIHGKPSGIDNAVSTFGSMIKFKKGELTNLKSSNPVKML ITDTRVGRNTKALVAGVSERASRHSDAMASVFNAVNSISEEVSSIVELAANDEIAITSKE EKLAELMEMNQGLLQCMGVSHSSIETVLRTTLKFNLVSKLTGAGGGGCVLTLIPTMLSNL VLEKVIAELESHSFRCFKVEVGGQGLQVCQGGCSYFNGDVV

Transcript Sequence

Transcript ID	Os10t0329300-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:9258892:9261262:1 gene:Os10g0329300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-01);Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-02);Similar to Mevalonate kinase (EC 2.7.1.36) (MK). (Os10t0329300-03)
Sequence	ATGAGAGCAGGAAGGGTTCGTCAGATCACTAATGGAGGTTTGCGCCGCCCGCGCCCCAGG CAAGATTATCCTTGCCGGCGAGCACGCCGTCGTCCATGGCTCAGCCGCCGTCGCCGCCGC CATCGACCTCTACACGCGCTGCTCCCTCTGCCTCATGCCCCTCGCTGACGACGAGGCGGC CGCCACGTTGGAGCTGGACCTCAAGGATCCTGGCCTCACCTTCTCGTGGCCGTGCGGGCG CCTCCGCGAGGTGCTGCTGACAGATGAGGCGGCGGGGGCACGGGAGGCGAGGCCATGCTC CCCGGACCGGCTGGCCTCCATTGCCAGGCTCTTGGAGGAGCACGAGATCCCTGAGGCCAA GATCTGGCTCTCCGCCGGTCTCTCTGCCTTCCTCTTCCTCTACACCTCCATATTGGGGTG TAGACCCGGGAAGGTGACGGTGAGCTCGGACCTGCCCATGGGGTCGGGGCTTGGGTCATC GGCCGCCTTCTGCGTGTCGATGTCGGGGGTGTTGCTGACAGCTGCCGGCGTGGTTACTGC AGTCGGCGGCATCAGCGGCGAGGGCATGGGGTGGGAGTTGGTCGGGAAGGATGATCTTGA GCTAGTTAACCGGTGGGCTTTCCAGGGGGAGAAGATTATCCATGGGAAGCCTTCTGGCAT CGACAATGCTGTCAGCACTTTCGGAAGCATGATCAAATTCAAGAAAGGGGAATTGACAAA CCTTAAATCTAGCAACCCAGTGAAAATGCTTATTACGGATACAAGAGTTGGTAGGAACAC AAAGGCTCTGGTTGCTGGTGTCTCTGAAAGAGCCTCCAGGCATTCAGATGCTATGGCTTC TGTATTCAACGCAGTGAACTCCATTAGTGAAGAGGTGTCAAGCATTGTTGAGTTAGCAGC TAATGATGAGATAGCTATCACCTCAAAGGAGGAAAAGCTGGCGGAACTCATGGAGATGAA CCAAGGTTTGCTTCAGTGCATGGGTGTTAGCCATTCTTCAATAGAAACTGTACTGCGGAC AACATTGAAATTCAACTTGGTCTCCAAGTTAACAGGAGCTGGAGGTGGTGGTTGTGTTTT GACCCTGATACCAACTATGCTATCCAACTTAGTTCTGGAGAAAGTCATTGCAGAGCTGGA GTCGCATAGTTTTCGCTGCTTTAAAGTTGAGGTTGGTGGACAGGGTCTTCAAGTTTGCCA AGGAGGCTGCTCCTATTTTAATGGAGATGTTGTATAATACTTTGTAGTTATGGATTAGTC AACGGTTTGAGATTTGTTCTTCACACTGTTTCTTCTAGATTAATCCATTAGTTATGTCCT TATTTTAGCCCCGGGCAGTTCCTGTATCAAATAATCCTACCGTCGCATGATTGCCCTTGG GGTTTGTATCAAATACAACTTTTTTGCTGATGC