Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0327800-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:9158360:9164663:1 gene:Os10g0327800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0327800-01)
Sequence

ATGCAAAGCCTCTCCCGCTCCACCCTCCTCGGCCTCGTCCGCCGCCTTCGCTTGTCCTCC
CCTCCATCCCCCGCGCCCCAACCGCGCCGCCTCCTCTTGACCGCCTCCCCGCCGCCGCCG
CCGCCGCCGACGACGACTGTCTGTTGTTCTCGTCCGGCGGCCGCGCCAGGGCGAGATGCT
CGGACGATGGCGGTGGCCCTGGCGGCTTCTCCCGATCGATCCATGGGCCGTGAATCCCGA
TTTCGTCATGGATGGAGGAGTCTGACCAGCAGCTCTGAGGAAAAAGGAGCGCTGAAAGAT
GTACCGGCCGCTGCCATGCTGAAGAATAGAAATGATAACGAGAAGAAACGGAGTAGGAGG
AGGAAGCCTGGAATAACCATCCTTAAGAATAGCGGACACCGTGATGGTTCTATATTTAAG
GGCAACCGTGGCTGGAAAATAGACTTCCGTATTGCAAACCCTGATGAGACCCAGTTCGAG
GCCATGATGCTGTCAGATCCTGGAGATTGCAAGCCAGATGAAATAGCATGTGTTATGCAC
CAACCATGTCCCATGCTGCAAATTTTTTCATTGAAATTGGCTAAAACTTCCATTGATCGT
TTTCCAGTTGAGTTGTATGGATACATAGCAGTGCGGGATCTCATGGATCCACTGCGCAAT
TATGTTGTCCGTCGCAGCAGGGATGATACCATTGCCGTGAAGCCGGGTTCTCTCATCGGA
ATGACTGGACCCAAGCGTGGCATAAAATTCTGTTCATCTGCCCTAATTGAGTATGATATG
AGAATCAAGACAGGAGAACAAGAAGAGGATGATATACAGCTGATTGACGGTGTATTAGGC
ATCTTTGATGATCTAAGCAAGCCATCGTGTAAACCGTTCAGAAGTCGCATTGATGGAGTT
GGTGGGGCAGTTGACATCACCGTTGGACTGCTTCCCAGTGCAGTGGAGGCCATATTTGAA
GTTTCCATATCAGAAGTCCAAAGTTGTTTCGATCTCACCGTGTGTTCTTATGCTGGTGGG
TTAAGCCAACAATTTAAGATCTTTCAGGGCACCATTGGTGAGTCGTGTGGCTTGAGAAGG
TCCGTGGTTGCTGTAATGTTGGATGGTATGTTGCACCTGAGGTTCATAGCTCGGAGAAAA
GGCTCTAAACGGGATCATGAAATTGCTTGTTCAATCAGAGCAAAGAAACATGGAAGCTCC
ACCCACCAGTTAAATACTGAGCTCGCTTCCTTCTTGGTCAAGGTGAATTGGTCGACATTG
CCTATGTAA

Peptide Sequence

PEP ID

Os10t0327800-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:9158360:9164663:1 gene:Os10g0327800 transcript:Os10t0327800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0327800-01)
Sequence

MQSLSRSTLLGLVRRLRLSSPPSPAPQPRRLLLTASPPPPPPPTTTVCCSRPAAAPGRDA
RTMAVALAASPDRSMGRESRFRHGWRSLTSSSEEKGALKDVPAAAMLKNRNDNEKKRSRR
RKPGITILKNSGHRDGSIFKGNRGWKIDFRIANPDETQFEAMMLSDPGDCKPDEIACVMH
QPCPMLQIFSLKLAKTSIDRFPVELYGYIAVRDLMDPLRNYVVRRSRDDTIAVKPGSLIG
MTGPKRGIKFCSSALIEYDMRIKTGEQEEDDIQLIDGVLGIFDDLSKPSCKPFRSRIDGV
GGAVDITVGLLPSAVEAIFEVSISEVQSCFDLTVCSYAGGLSQQFKIFQGTIGESCGLRR
SVVAVMLDGMLHLRFIARRKGSKRDHEIACSIRAKKHGSSTHQLNTELASFLVKVNWSTL
PM

Transcript Sequence

Transcript ID

Os10t0327800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:9158360:9164663:1 gene:Os10g0327800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0327800-01)
Sequence

CCTTCCCCAGACACTGCACTACTGCAGCCCCCCGACCCCGATTGATCGCACGTATCGCCG
GCGGCATTGGCCAAGAACTAGCAGCCGCGCAGCGGATGCAAAGCCTCTCCCGCTCCACCC
TCCTCGGCCTCGTCCGCCGCCTTCGCTTGTCCTCCCCTCCATCCCCCGCGCCCCAACCGC
GCCGCCTCCTCTTGACCGCCTCCCCGCCGCCGCCGCCGCCGCCGACGACGACTGTCTGTT
GTTCTCGTCCGGCGGCCGCGCCAGGGCGAGATGCTCGGACGATGGCGGTGGCCCTGGCGG
CTTCTCCCGATCGATCCATGGGCCGTGAATCCCGATTTCGTCATGGATGGAGGAGTCTGA
CCAGCAGCTCTGAGGAAAAAGGAGCGCTGAAAGATGTACCGGCCGCTGCCATGCTGAAGA
ATAGAAATGATAACGAGAAGAAACGGAGTAGGAGGAGGAAGCCTGGAATAACCATCCTTA
AGAATAGCGGACACCGTGATGGTTCTATATTTAAGGGCAACCGTGGCTGGAAAATAGACT
TCCGTATTGCAAACCCTGATGAGACCCAGTTCGAGGCCATGATGCTGTCAGATCCTGGAG
ATTGCAAGCCAGATGAAATAGCATGTGTTATGCACCAACCATGTCCCATGCTGCAAATTT
TTTCATTGAAATTGGCTAAAACTTCCATTGATCGTTTTCCAGTTGAGTTGTATGGATACA
TAGCAGTGCGGGATCTCATGGATCCACTGCGCAATTATGTTGTCCGTCGCAGCAGGGATG
ATACCATTGCCGTGAAGCCGGGTTCTCTCATCGGAATGACTGGACCCAAGCGTGGCATAA
AATTCTGTTCATCTGCCCTAATTGAGTATGATATGAGAATCAAGACAGGAGAACAAGAAG
AGGATGATATACAGCTGATTGACGGTGTATTAGGCATCTTTGATGATCTAAGCAAGCCAT
CGTGTAAACCGTTCAGAAGTCGCATTGATGGAGTTGGTGGGGCAGTTGACATCACCGTTG
GACTGCTTCCCAGTGCAGTGGAGGCCATATTTGAAGTTTCCATATCAGAAGTCCAAAGTT
GTTTCGATCTCACCGTGTGTTCTTATGCTGGTGGGTTAAGCCAACAATTTAAGATCTTTC
AGGGCACCATTGGTGAGTCGTGTGGCTTGAGAAGGTCCGTGGTTGCTGTAATGTTGGATG
GTATGTTGCACCTGAGGTTCATAGCTCGGAGAAAAGGCTCTAAACGGGATCATGAAATTG
CTTGTTCAATCAGAGCAAAGAAACATGGAAGCTCCACCCACCAGTTAAATACTGAGCTCG
CTTCCTTCTTGGTCAAGGTGAATTGGTCGACATTGCCTATGTAAATTCCTTATCTTTTCT
GTTATTCCTTAAATTTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATTCCTTAAAT
TTTTGTTAGAAGAGATAACCTGCTTCATCCCGTTAATGCATCTCCATCAATGGTGGATGT
TTGAAATGACC