Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0208500-03
CDS Infomation

cds chromosome:IRGSP-1.0:10:7693420:7696842:1 gene:Os10g0208500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os10t0208500-01);Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os10t0208500-02);Hypothetical conserved gene. (Os10t0208500-03)
Sequence

CTTGGGATTTTGGTTGCACGAGCCTGCGACACTGTTACTGGTGGAAATCAGTTGGAGAAA
AGCATTACTGACTTTGGGACCGCAAAGGCAAGGCTCATTCACTACCACTCTGAGTTGGAT
AACATTATTATCAAGAATAGTAGCAGCAAGAGAAAAGTTCCGATAAATAAAATCGCAAAG
GCAACAGCTTATGAGTCATGCTCTCGAAGGTCTGCATCATCACAAGGATCCTGTATCAGA
TCAGAATGTGCTATGACGGACACATTAAAGGATTCCAATGATAAGTCGATTCATGGTCAG
GGTAGTGTTGTTTCTCTCACAAACTTATGGCAAGAGTGGCACTATGACTATGGGGTCCTT
ACTGTTTTAACAGCACCATTATTCTTGTGCTCCACAATGGGAGAAGATTGTTCCATCAAC
AAAGAATGCTCTCCTCCTGACGAGCACACGTACTTGCAGCTATTCAATAGGAGGAAGGTA
TTCTCGGTGAGATGCTCTCCAGAGAGCTTCATTGTGCAGGTCGGGGAGACAGCAGACATC
TTGTCAGGCGGGAAGCTGAGGTCTACACTTCATGCTGTGAGTAGACCATACGGCTCAACA
AACATCAGCCGGGAAACTTTTGTGGTCTTCTTACAGCCATCATGGGACAAAAAGTTGCCT
TACTCTGGTCACTGTTTTGCTGGTGATGATGAACCTAGTGAAGGCGATGACTCAACATTC
AGTGATGGGTCAGACATGTTTTCGAGTGAGCATACATTGATGCAAGATATTTTGAAAAAG
ATCCCCCCTCTGTCATCAAGGGTAAAAGAAGGGATGACGTTTGCTGAATTTTCTCGACAG
ACAACGAAACAGTATTATGGTGGTGGAGGTATCCAACAAAACAATTAA

Peptide Sequence

PEP ID

Os10t0208500-03
PEP Infomation

pep chromosome:IRGSP-1.0:10:7693420:7696842:1 gene:Os10g0208500 transcript:Os10t0208500-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os10t0208500-01);Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os10t0208500-02);Hypothetical conserved gene. (Os10t0208500-03)
Sequence

LGILVARACDTVTGGNQLEKSITDFGTAKARLIHYHSELDNIIIKNSSSKRKVPINKIAK
ATAYESCSRRSASSQGSCIRSECAMTDTLKDSNDKSIHGQGSVVSLTNLWQEWHYDYGVL
TVLTAPLFLCSTMGEDCSINKECSPPDEHTYLQLFNRRKVFSVRCSPESFIVQVGETADI
LSGGKLRSTLHAVSRPYGSTNISRETFVVFLQPSWDKKLPYSGHCFAGDDEPSEGDDSTF
SDGSDMFSSEHTLMQDILKKIPPLSSRVKEGMTFAEFSRQTTKQYYGGGGIQQNN

Transcript Sequence

Transcript ID

Os10t0208500-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:7693420:7696842:1 gene:Os10g0208500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical protein. (Os10t0208500-01);Oxoglutarate/iron-dependent oxygenase domain containing protein. (Os10t0208500-02);Hypothetical conserved gene. (Os10t0208500-03)
Sequence

AACTTGGGATTTTGGTTGCACGAGCCTGCGACACTGTTACTGGTGGAAATCAGTTGGAGA
AAAGCATTACTGACTTTGGGACCGCAAAGGCAAGGCTCATTCACTACCACTCTGAGTTGG
ATAACATTATTATCAAGAATAGTAGCAGCAAGAGAAAAGTTCCGATAAATAAAATCGCAA
AGGCAACAGCTTATGAGTCATGCTCTCGAAGGTCTGCATCATCACAAGGATCCTGTATCA
GATCAGAATGTGCTATGACGGACACATTAAAGGATTCCAATGATAAGTCGATTCATGGTC
AGGGTAGTGTTGTTTCTCTCACAAACTTATGGCAAGAGTGGCACTATGACTATGGGGTCC
TTACTGTTTTAACAGCACCATTATTCTTGTGCTCCACAATGGGAGAAGATTGTTCCATCA
ACAAAGAATGCTCTCCTCCTGACGAGCACACGTACTTGCAGCTATTCAATAGGAGGAAGG
TATTCTCGGTGAGATGCTCTCCAGAGAGCTTCATTGTGCAGGTCGGGGAGACAGCAGACA
TCTTGTCAGGCGGGAAGCTGAGGTCTACACTTCATGCTGTGAGTAGACCATACGGCTCAA
CAAACATCAGCCGGGAAACTTTTGTGGTCTTCTTACAGCCATCATGGGACAAAAAGTTGC
CTTACTCTGGTCACTGTTTTGCTGGTGATGATGAACCTAGTGAAGGCGATGACTCAACAT
TCAGTGATGGGTCAGACATGTTTTCGAGTGAGCATACATTGATGCAAGATATTTTGAAAA
AGATCCCCCCTCTGTCATCAAGGGTAAAAGAAGGGATGACGTTTGCTGAATTTTCTCGAC
AGACAACGAAACAGTATTATGGTGGTGGAGGTATCCAACAAAACAATTAAAAAGCAGTAC
TATGCTACCTTTGGATTGAGGCCCACAGGAGATCTCTGCATGTCACCTAGTTATTCCAAC
TGCAGAAATGAGGACGCTTGCAAAGCAATTATCAATGGAATGATTCTTCAATCAGTAAAA
TCAGGTGTTCCATGCTCATCATCTCAAGTCATGGAGAACGTCTTTGGACATTTTATTATT
TGGCACTACCGCAAGCACCAGACAAGTCCATAAGCCGTATCACCCCTGTCGTGTAGGAGC
GGATGCCATCCTCTGATGATGATAACTGGATGCCATGGTAGTAACTAGGACTACGGCGAG
GCCAACACGCACAGTCTAGCGGGAGCTGGAGCACCTTGACAGAGCAAGCCTTCTCCAGGT
TTGGTGTGGCATGGAGCCGAGAAGGGAGTTCTATGGTGAAGTTGCCATTCTCATCAGTTA
CTGTGAATACAGAGTTAGCCATCGTCTTTATACCTCCAGTTTCACAGGCCACTCCTACTG
TAGCTCCTGCTTGAGGAAAATCACAAGGTTAGCTCATGATTCCCTTTGCATAGTATTTCA
GCACCAAAAAGAGGTTACAACTATGTATAAATTAGGTGTTTAGCTTGTAACTTTGTTATT
TTATAGTTATGATGGCTTTTTCTCATATGTAATGAACCTCAACCATACATCAGAACAGAA
AAATTTGAAGTGGTCGGCATGCACAATGCTAATATCCAAGT