Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0207500-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:7624066:7625061:-1 gene:Os10g0207500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDL1B description:Similar to TPD1. (Os10t0207500-01)
Sequence

ATGGCCGACTGCACTACGATGCGTTTGGCTTCATCTGTGACCATCATCTTGCTGCTGCTC
GTAGCTAGCCAAGCTCTAGTAGTCTCTGGCGAGTCATCTTCCTCCGCGATGCAGTCCAAG
ACGTTGAACATGAACAAGCTTCTCAACATCAGTGAAGATCACTCTCCTAATGGCGGACGC
CACTGGATGCAGCGGATGCAGCCGGACAGCTGCTCGGAGCAGAACGTGGTGGTGTACCAG
AACAACGCGGAGCACCTCCCCAGCGGCATCCCGACCTACAGCGTGGAAATCATCAACGTC
TGCACGGCGTGCACGGTGTACGACGTCCACATCTCCTGCGGCGAGTTTGCCTCCGCGGAG
CTCGTCGACCCCAGCCAGTTCCAGCGTATCGGCTTCAACGACTGTCTGGTGAAGGGCGGA
GGCCGGTTGGGTCCTAGCGAGGCCGTCTCCTTCCAGTACTCCAACTCCTTCGCCTACCCG
CTCGCCGTAGCTAATGTCGCGTGTGAGTAG

Peptide Sequence

PEP ID

Os10t0207500-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:7624066:7625061:-1 gene:Os10g0207500 transcript:Os10t0207500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDL1B description:Similar to TPD1. (Os10t0207500-01)
Sequence

MADCTTMRLASSVTIILLLLVASQALVVSGESSSSAMQSKTLNMNKLLNISEDHSPNGGR
HWMQRMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVCTACTVYDVHISCGEFASAE
LVDPSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVACE

Transcript Sequence

Transcript ID

Os10t0207500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:7624066:7625061:-1 gene:Os10g0207500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDL1B description:Similar to TPD1. (Os10t0207500-01)
Sequence

ATGCCTGTATAGCTTGAGCAAGTATTTGGCAGTTTGCTGCCAACTGCTACCCTATTTCAA
ATCTAGGTAAGATCTAGCTGCAGGTTATACAGAGAAGGCAATGGCCGACTGCACTACGAT
GCGTTTGGCTTCATCTGTGACCATCATCTTGCTGCTGCTCGTAGCTAGCCAAGCTCTAGT
AGTCTCTGGCGAGTCATCTTCCTCCGCGATGCAGTCCAAGACGTTGAACATGAACAAGCT
TCTCAACATCAGTGAAGATCACTCTCCTAATGGCGGACGCCACTGGATGCAGCGGATGCA
GCCGGACAGCTGCTCGGAGCAGAACGTGGTGGTGTACCAGAACAACGCGGAGCACCTCCC
CAGCGGCATCCCGACCTACAGCGTGGAAATCATCAACGTCTGCACGGCGTGCACGGTGTA
CGACGTCCACATCTCCTGCGGCGAGTTTGCCTCCGCGGAGCTCGTCGACCCCAGCCAGTT
CCAGCGTATCGGCTTCAACGACTGTCTGGTGAAGGGCGGAGGCCGGTTGGGTCCTAGCGA
GGCCGTCTCCTTCCAGTACTCCAACTCCTTCGCCTACCCGCTCGCCGTAGCTAATGTCGC
GTGTGAGTAGGTTTTTTCAGTGGAAATGCGTGCGCATGTGTTGTACGTAGTCGACTGGCC
TATTAGCTACGTACTGTCTTCGATGTTTCAGACATTCAGTTGATCGAGCTTATTTATCTA
TGGGTGACATGCTTCGACTTTATCTGCGCAAGTGCCTGGTGTGCATTATGTGGAGGACTA
TATAATAGGTTGCTATCTTT