Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0206800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:7574038:7579887:1 gene:Os10g0206800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FRD3-like protein 2 description:Multidrug and toxic compound extrusion (MATE) protein, Al-induced secretion of citrate (Os10t0206800-01);Similar to predicted protein. (Os10t0206800-02)
Sequence	ATGAATGGGGAGAGCCTCCTCGACCGCAGCTCCTCCGCCGACGCCGCCATGAACGACGCC GTGCCCGGCCACCGCCACCACCACCCGCTTAGCGTCTTCCTCCGGGACGCCAGGTTGGCG TTCAGGTGGGACGAGCTCGGGAGGGAGATCATGGGGATTGCGGTGCCCGGCGCGCTCGCC CTCATGGCTGACCCGGTCGCCTCGCTCGTCGACACCGCCTTCATTGGCCACATAGGCCCA GTTGAACTTGCAGCTGTTGGTGTATCTATTGCCGTGTTTAATCAAGTATCAAGGATTGCA ATATTTCCCCTTGTCAGTGTCACGACATCATTTGTTGCGGAGGAAGATGCTACATCCAGT GACAGAGAAAAATATGAAATAAATGGCGAGAATGAATTCAATGTTTCAGACAGTGAAATG GAAGAGCTGGTTTCTCATGAAGAGGCTAGTGCTGCTCCCAGTAAGTCGTCTTTCGAAACT GACTCAAGTGATGTCAAAATTGAACATAAGCGGAAAAACATTCCATCGGTGTCTACAGCA TTACTACTTGGTGGGGTGCTCGGCCTTTTACAAGCACTGCTTCTTGTTATTTGCGCAAAA CCTCTCTTAGGCTACATGGGTGTGAAACAGGGCTCTGCAATGTTGATGCCAGCACTAAAG TACTTGGTAGTCAGATCTCTTGGTGCTCCTGCTGTGCTTTTATCTCTGGCAATGCAAGGG GTATTTCGTGGACTTAAAGATACAAAGACACCTCTTTATGCAACTGTGGCTGGAGATGCA ACCAACATAGTTTTGGATCCAATATTTATGTTTGTCTTCCAGTATGGTGTCAGTGGTGCA GCAATTGCTCATGTTATATCACAATATTTCATTGCATCCATTCTCTTATGGAGGTTAAGG CTACATGTTGACCTACTTCCACCCAGCTTTAAACATATGCAGTTCAGTCGATTCCTTAAA AACGGTTTCCTATTACTTGCCAGAGTTATTGCTGCAACATGCTGCGTGACACTATCTGCA TCAATGGCTGCACGGCTAGGTTCAGTTCCAATGGCTGCATTTCAGATTTGCTTGCAGATC TGGCTGGCTTCGTCTCTTCTTGCTGATGGATTGGCTTTTGCAGGACAGGCTATACTTGCA AGTGCATTTGCTCGTCAAGACCATTCTAAGGCCGCAGCCACAGCTTCTCGTATATTGCAG CTGGGATTGGTTTTAGGACTTCTCCTAAGCATTTTTCTTGGCATTGGCCTCCGTTTAGGA TCAAGGTTATTTACTGATGACCAGGATGTTCTACATCATATTTACCTAGGCATACCGTTT GTCTCTCTGACTCAACCAATCAATGCGTTAGCTTTTGTTTTTGATGGTATCAATTATGGA GCATCAGATTTTGGATATGCTGCTTATTCAATGATTCTTGTGGCAATTGTCAGCATCATC TTCATAGTCACACTAGCAAGTTACAATGGTTTTGTCGGAATTTGGATAGCTTTGACAGTC TACATGAGCCTCCGAATGCTTGCAGGATTCTTAAGGATAGGGACTGCACGAGGACCATGG ACTTTCTATGCAGCTCAACGCATGCATTCTCATGAGGTGGTTGGACTTTGTTGA

Peptide Sequence

PEP ID	Os10t0206800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:7574038:7579887:1 gene:Os10g0206800 transcript:Os10t0206800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FRD3-like protein 2 description:Multidrug and toxic compound extrusion (MATE) protein, Al-induced secretion of citrate (Os10t0206800-01);Similar to predicted protein. (Os10t0206800-02)
Sequence	MNGESLLDRSSSADAAMNDAVPGHRHHHPLSVFLRDARLAFRWDELGREIMGIAVPGALA LMADPVASLVDTAFIGHIGPVELAAVGVSIAVFNQVSRIAIFPLVSVTTSFVAEEDATSS DREKYEINGENEFNVSDSEMEELVSHEEASAAPSKSSFETDSSDVKIEHKRKNIPSVSTA LLLGGVLGLLQALLLVICAKPLLGYMGVKQGSAMLMPALKYLVVRSLGAPAVLLSLAMQG VFRGLKDTKTPLYATVAGDATNIVLDPIFMFVFQYGVSGAAIAHVISQYFIASILLWRLR LHVDLLPPSFKHMQFSRFLKNGFLLLARVIAATCCVTLSASMAARLGSVPMAAFQICLQI WLASSLLADGLAFAGQAILASAFARQDHSKAAATASRILQLGLVLGLLLSIFLGIGLRLG SRLFTDDQDVLHHIYLGIPFVSLTQPINALAFVFDGINYGASDFGYAAYSMILVAIVSII FIVTLASYNGFVGIWIALTVYMSLRMLAGFLRIGTARGPWTFYAAQRMHSHEVVGLC

Transcript Sequence

Transcript ID	Os10t0206800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:7574038:7579887:1 gene:Os10g0206800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FRD3-like protein 2 description:Multidrug and toxic compound extrusion (MATE) protein, Al-induced secretion of citrate (Os10t0206800-01);Similar to predicted protein. (Os10t0206800-02)
Sequence	GTCCTCCAAAGCACCAGCGCCGGCAGGAGGGCCCCCCGCCGGATTCGATTCCCGGCACGT CCTTCTCCTCCCTTTCTCGCGGGCGCCGCACGCCCCTTCCCCCTCCTCCTCCTCCTCTTG GTCTGATGAATGGGGAGAGCCTCCTCGACCGCAGCTCCTCCGCCGACGCCGCCATGAACG ACGCCGTGCCCGGCCACCGCCACCACCACCCGCTTAGCGTCTTCCTCCGGGACGCCAGGT TGGCGTTCAGGTGGGACGAGCTCGGGAGGGAGATCATGGGGATTGCGGTGCCCGGCGCGC TCGCCCTCATGGCTGACCCGGTCGCCTCGCTCGTCGACACCGCCTTCATTGGCCACATAG GCCCAGTTGAACTTGCAGCTGTTGGTGTATCTATTGCCGTGTTTAATCAAGTATCAAGGA TTGCAATATTTCCCCTTGTCAGTGTCACGACATCATTTGTTGCGGAGGAAGATGCTACAT CCAGTGACAGAGAAAAATATGAAATAAATGGCGAGAATGAATTCAATGTTTCAGACAGTG AAATGGAAGAGCTGGTTTCTCATGAAGAGGCTAGTGCTGCTCCCAGTAAGTCGTCTTTCG AAACTGACTCAAGTGATGTCAAAATTGAACATAAGCGGAAAAACATTCCATCGGTGTCTA CAGCATTACTACTTGGTGGGGTGCTCGGCCTTTTACAAGCACTGCTTCTTGTTATTTGCG CAAAACCTCTCTTAGGCTACATGGGTGTGAAACAGGGCTCTGCAATGTTGATGCCAGCAC TAAAGTACTTGGTAGTCAGATCTCTTGGTGCTCCTGCTGTGCTTTTATCTCTGGCAATGC AAGGGGTATTTCGTGGACTTAAAGATACAAAGACACCTCTTTATGCAACTGTGGCTGGAG ATGCAACCAACATAGTTTTGGATCCAATATTTATGTTTGTCTTCCAGTATGGTGTCAGTG GTGCAGCAATTGCTCATGTTATATCACAATATTTCATTGCATCCATTCTCTTATGGAGGT TAAGGCTACATGTTGACCTACTTCCACCCAGCTTTAAACATATGCAGTTCAGTCGATTCC TTAAAAACGGTTTCCTATTACTTGCCAGAGTTATTGCTGCAACATGCTGCGTGACACTAT CTGCATCAATGGCTGCACGGCTAGGTTCAGTTCCAATGGCTGCATTTCAGATTTGCTTGC AGATCTGGCTGGCTTCGTCTCTTCTTGCTGATGGATTGGCTTTTGCAGGACAGGCTATAC TTGCAAGTGCATTTGCTCGTCAAGACCATTCTAAGGCCGCAGCCACAGCTTCTCGTATAT TGCAGCTGGGATTGGTTTTAGGACTTCTCCTAAGCATTTTTCTTGGCATTGGCCTCCGTT TAGGATCAAGGTTATTTACTGATGACCAGGATGTTCTACATCATATTTACCTAGGCATAC CGTTTGTCTCTCTGACTCAACCAATCAATGCGTTAGCTTTTGTTTTTGATGGTATCAATT ATGGAGCATCAGATTTTGGATATGCTGCTTATTCAATGATTCTTGTGGCAATTGTCAGCA TCATCTTCATAGTCACACTAGCAAGTTACAATGGTTTTGTCGGAATTTGGATAGCTTTGA CAGTCTACATGAGCCTCCGAATGCTTGCAGGATTCTTAAGGATAGGGACTGCACGAGGAC CATGGACTTTCTATGCAGCTCAACGCATGCATTCTCATGAGGTGGTTGGACTTTGTTGAA CAATACTATAGGAAGACACCATGGATACTTTGTAAGGTTTTGCAGGTTTGGTGGGAATGG AGGTTGTTTGAACAAAAGAAAATATTCAACTGTCATGTACATAGATAATCACACATGTTA CTACTATTCTAATAGATTCTCCCCTGTCGTGTATGTTGTATTTGCCCATGTATAGTTCAG TATGTTCGGCTGGCTATTTTGTAACAAGTTTGGATATAAAGTCACGTAGCATAAGATGTT TGCACACCGTGAGATATACGGAGCATTGGCATTTGATTTTTAAAACATTAATGGAAATTT TACCAGATGCC