Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0206500-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:7557620:7564109:1 gene:Os10g0206500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os10t0206500-00)
Sequence

ATGCAGCTGCTCCTCCTGCTGCTCGCCGCCGTCTTGGTGGCGGCAGAGCCGGCTGCAGCG
ATATCGACGATGCCCATGGAGCTCTACTTCTCGCCGGGGGAGCTCGCGCGTATTGCCGGG
TACGGCGAGGAGCCGGTTTCGACCGTGGTCGTGTCCGGCCAGGTCGCCTGCGAGCTCTGC
CTCTGTCCCGGCTCCGACCTCCTCACCTTCGAGCTCCCAGGAGCCAAGGTAGAAGTAGCC
TGTGAAACCGAAGGCCCCAACACACAGGCGAACTCTGTATTTACAGCAACCGATGAGTTC
GGCAACTTCACCTTCCACCTCCCTTCTCGGCTCCACGCCACACCAAGCCTCGAGAACGCC
TGCGTCGTCAAGGTGCTCCAGCTCCCTCCAGACTCTGCATGTGGCCTTCGTCACCGTCCC
GCCGCCTCCTACCGCATCCGGCCATCGTCCTCGTTGTCGTCGTCGGCTGATGGCTTCCGC
GCCTACACGGCCGGGGTGATACGGCTGCAGCACGGCGGCACGCCGTCCGGGGAGTGCGTG
CAGGTAGAGGACAGAGTGGATAAGTAG

Peptide Sequence

PEP ID

Os10t0206500-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:7557620:7564109:1 gene:Os10g0206500 transcript:Os10t0206500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os10t0206500-00)
Sequence

MQLLLLLLAAVLVAAEPAAAISTMPMELYFSPGELARIAGYGEEPVSTVVVSGQVACELC
LCPGSDLLTFELPGAKVEVACETEGPNTQANSVFTATDEFGNFTFHLPSRLHATPSLENA
CVVKVLQLPPDSACGLRHRPAASYRIRPSSSLSSSADGFRAYTAGVIRLQHGGTPSGECV
QVEDRVDK

Transcript Sequence

Transcript ID

Os10t0206500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:7557620:7564109:1 gene:Os10g0206500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen/extensin domain containing protein. (Os10t0206500-00)
Sequence

AAACCCAACAACGAGAATTACAAAGCAAGAAGCTATCTGCACGCGTGGCATGCAGCTGCT
CCTCCTGCTGCTCGCCGCCGTCTTGGTGGCGGCAGAGCCGGCTGCAGCGATATCGACGAT
GCCCATGGAGCTCTACTTCTCGCCGGGGGAGCTCGCGCGTATTGCCGGGTACGGCGAGGA
GCCGGTTTCGACCGTGGTCGTGTCCGGCCAGGTCGCCTGCGAGCTCTGCCTCTGTCCCGG
CTCCGACCTCCTCACCTTCGAGCTCCCAGGAGCCAAGGTAGAAGTAGCCTGTGAAACCGA
AGGCCCCAACACACAGGCGAACTCTGTATTTACAGCAACCGATGAGTTCGGCAACTTCAC
CTTCCACCTCCCTTCTCGGCTCCACGCCACACCAAGCCTCGAGAACGCCTGCGTCGTCAA
GGTGCTCCAGCTCCCTCCAGACTCTGCATGTGGCCTTCGTCACCGTCCCGCCGCCTCCTA
CCGCATCCGGCCATCGTCCTCGTTGTCGTCGTCGGCTGATGGCTTCCGCGCCTACACGGC
CGGGGTGATACGGCTGCAGCACGGCGGCACGCCGTCCGGGGAGTGCGTGCAGGTAGAGGA
CAGAGTGGATAAGTAGCCTAAGAATGGCTGGTGGAAATCGTGCATTGGGCGAAACCCAGA
GATTTCATCGACCGATCGATCAGTTGCTTAGTTAGATAGGAGTAGCTGTCTTCTGGTTTC
TCCAATTTGAGAAATTGTATATGGAGAGGAGAGCGGAGGTGTTGATTAGGTCTTATTACC
AAGCATGTAAATGGAAAAAATGCTGCAAATTAAGTACATTTCAGGAGTCAGTTTGAGTTA
TTTCTCATAATGATGACGAATGATTTGA