Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0204400-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:7438368:7444003:-1 gene:Os10g0204400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEP carboxykinase, Phosphoenolpyruvate carboxykinase description:Similar to Phosphoenolpyruvate carboxykinase (Fragment). (Os10t0204400-01)
Sequence	ATGATGGAGGCGAAAGACGGGCAAGCATGGCTGGGGACGAACGGATACGGCAGCAGGAGG GAGGAAGACGGCGTGTGCCACGACGACAGCGCGACACCGGTGAGGGCGAACACTGTCGAC GAGCTACACTCGCTGCAGAGGAAGCCTCAGGTAGTGGAGGATCGCCACAGGCTGCAGCTT CAGTCCATCAGTGCGTCTTTGGCATCGATGACATGTGGGATTGGGCCAAAACTCGTCAAC GGTGACCCAGCAAGGAAAAAAGAAATGGCTGGCAAGGCTGTGACACATCACCAACACCAT ATCACTGTCCCCACGATCACTGTGAGCGACAGTGACCTCAAGTTCACCCATGTTCTGTAC AACTTATCCCCTTCTGAACTTTATGAGCATGCAATCAAATATGAGAAAGGGTCATTCATC ACATCCAGTGGGGCGTTAGCGACGCTATCAGGAGCAAAGACCGGTCGATCACCTAGGGAC AAGCGTGTTGTCAAGGATGAAACAACAGATGATCTGTGGTGGGGCAAGGGATCACCAAAC ATTGAAATGGACGAGCAAACCTTTCTGATCAACAGGGAGAGAGCTGTTGACTACTTGAAC TCCCTTGATAAGGTGTTTGTTAATGATCAGTTCCTAAACTGGGACCCCAACAATAGGATA AAAGTTCGAATCATCTCTGCGAGGGCCTACCATTCTCTCTTCATGCACAACATGTGCATC CGGCCAACATACGAGGAACTAGAGAATTTTGGCGAGCCCGACTTCACCATCTACAATGCT GGACAGTTCCCGTGCAACCGTTACACGCATTACATGACATCGTCAACTAGCATAGACTTA AATCTTAAGCGGAGAGAAATGGTCATCCTGGGAACACAATATGCTGGAGAGATGAAGAAA GGCCTCTTCAGTGTGATGCACTACCTCATGCCCAAAAAGCAGATCCTCTCGTTGCACTCT GGCTGCAACATGGGCAGAGGGGGTGATGTAGCCCTGTTTTTTGGATTGTCAGGTACTGGA AAGACAACTCTGTCAACAGACAGGAATAGGATCTTAATTGGTGATGATGAACACTGCTGG AGTGATAATGGTATCTCTAACATTGAGGGCGGCTGCTATGCTAAATGCATAGATCTTTCT CAGGAGAAAGAACCTGACATTTGGGATGCAATCAAGTTTGGCACAGTGTTGGAGAATGTT GTTTTCGATGAGCACTCCCGTGAAGTTGATTATACAGAAAAATCTGTCACAGAGAATACC CGTGCTGCTTACCCTATTGAATACATAGCTAATGCTAAGATACCATGTGTTGGGCCACAC CCAAAGAATGTTATCCTACTTGCATGTGATGCATTTGGTGTCCTCCCTCCTGTCAGCAAG TTGAGCCATGCACAAACCATGTACCATTTTATCAGTGGCTACACTGCATTGGTCGCTGGA ACTGAAGATGGTATCAAGGAGCCACAGGCTACATTTTCTGCCTGCTTTGGTGCAGCTTTT ATAATGCTCCACCCAACTCGGTACGCTGCCATGCTGGCAGATAAGATGAACAAGCATGGA GCTACCGGATGGCTTGTCAACACTGGTTGGATCGGGGGAAGTTATGGTGTAGGTGAGCGA ATCAGCTTGGCCTACACAAGGAAAATCATCGATGCCATTCACTCGGGTGAGCTTTTGGCT AGAAGCTACAAAAAGACAGATGTCTTTGGACTAGACATCCCCACAAAAGTGGAAGGAGTT CCATCTGAATTGCTTGACCCAATAAATACCTGGGAAGACAAAGACTCATACAAGTTGACA CTTCTAAAGCTGTCAGATCTGTTCAAGAGAAATTTCAAGGTATTTGCAAATTACAAGAAA GGTGGTGTTAGTGATCTGGCTGATGAGATTGCTGCTGCAGGACCAAATTTCTGA

Peptide Sequence

PEP ID	Os10t0204400-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:7438368:7444003:-1 gene:Os10g0204400 transcript:Os10t0204400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEP carboxykinase, Phosphoenolpyruvate carboxykinase description:Similar to Phosphoenolpyruvate carboxykinase (Fragment). (Os10t0204400-01)
Sequence	MMEAKDGQAWLGTNGYGSRREEDGVCHDDSATPVRANTVDELHSLQRKPQVVEDRHRLQL QSISASLASMTCGIGPKLVNGDPARKKEMAGKAVTHHQHHITVPTITVSDSDLKFTHVLY NLSPSELYEHAIKYEKGSFITSSGALATLSGAKTGRSPRDKRVVKDETTDDLWWGKGSPN IEMDEQTFLINRERAVDYLNSLDKVFVNDQFLNWDPNNRIKVRIISARAYHSLFMHNMCI RPTYEELENFGEPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLKRREMVILGTQYAGEMKK GLFSVMHYLMPKKQILSLHSGCNMGRGGDVALFFGLSGTGKTTLSTDRNRILIGDDEHCW SDNGISNIEGGCYAKCIDLSQEKEPDIWDAIKFGTVLENVVFDEHSREVDYTEKSVTENT RAAYPIEYIANAKIPCVGPHPKNVILLACDAFGVLPPVSKLSHAQTMYHFISGYTALVAG TEDGIKEPQATFSACFGAAFIMLHPTRYAAMLADKMNKHGATGWLVNTGWIGGSYGVGER ISLAYTRKIIDAIHSGELLARSYKKTDVFGLDIPTKVEGVPSELLDPINTWEDKDSYKLT LLKLSDLFKRNFKVFANYKKGGVSDLADEIAAAGPNF

Transcript Sequence

Transcript ID	Os10t0204400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:7438368:7444003:-1 gene:Os10g0204400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PEP carboxykinase, Phosphoenolpyruvate carboxykinase description:Similar to Phosphoenolpyruvate carboxykinase (Fragment). (Os10t0204400-01)
Sequence	ATTCTGAAAACTTCAGTCTTTCTCTCTTCAGCATCTCTACTCTCGCTCCATTTCTAAGGG ATCGAAATGATGGAGGCGAAAGACGGGCAAGCATGGCTGGGGACGAACGGATACGGCAGC AGGAGGGAGGAAGACGGCGTGTGCCACGACGACAGCGCGACACCGGTGAGGGCGAACACT GTCGACGAGCTACACTCGCTGCAGAGGAAGCCTCAGGTAGTGGAGGATCGCCACAGGCTG CAGCTTCAGTCCATCAGTGCGTCTTTGGCATCGATGACATGTGGGATTGGGCCAAAACTC GTCAACGGTGACCCAGCAAGGAAAAAAGAAATGGCTGGCAAGGCTGTGACACATCACCAA CACCATATCACTGTCCCCACGATCACTGTGAGCGACAGTGACCTCAAGTTCACCCATGTT CTGTACAACTTATCCCCTTCTGAACTTTATGAGCATGCAATCAAATATGAGAAAGGGTCA TTCATCACATCCAGTGGGGCGTTAGCGACGCTATCAGGAGCAAAGACCGGTCGATCACCT AGGGACAAGCGTGTTGTCAAGGATGAAACAACAGATGATCTGTGGTGGGGCAAGGGATCA CCAAACATTGAAATGGACGAGCAAACCTTTCTGATCAACAGGGAGAGAGCTGTTGACTAC TTGAACTCCCTTGATAAGGTGTTTGTTAATGATCAGTTCCTAAACTGGGACCCCAACAAT AGGATAAAAGTTCGAATCATCTCTGCGAGGGCCTACCATTCTCTCTTCATGCACAACATG TGCATCCGGCCAACATACGAGGAACTAGAGAATTTTGGCGAGCCCGACTTCACCATCTAC AATGCTGGACAGTTCCCGTGCAACCGTTACACGCATTACATGACATCGTCAACTAGCATA GACTTAAATCTTAAGCGGAGAGAAATGGTCATCCTGGGAACACAATATGCTGGAGAGATG AAGAAAGGCCTCTTCAGTGTGATGCACTACCTCATGCCCAAAAAGCAGATCCTCTCGTTG CACTCTGGCTGCAACATGGGCAGAGGGGGTGATGTAGCCCTGTTTTTTGGATTGTCAGGT ACTGGAAAGACAACTCTGTCAACAGACAGGAATAGGATCTTAATTGGTGATGATGAACAC TGCTGGAGTGATAATGGTATCTCTAACATTGAGGGCGGCTGCTATGCTAAATGCATAGAT CTTTCTCAGGAGAAAGAACCTGACATTTGGGATGCAATCAAGTTTGGCACAGTGTTGGAG AATGTTGTTTTCGATGAGCACTCCCGTGAAGTTGATTATACAGAAAAATCTGTCACAGAG AATACCCGTGCTGCTTACCCTATTGAATACATAGCTAATGCTAAGATACCATGTGTTGGG CCACACCCAAAGAATGTTATCCTACTTGCATGTGATGCATTTGGTGTCCTCCCTCCTGTC AGCAAGTTGAGCCATGCACAAACCATGTACCATTTTATCAGTGGCTACACTGCATTGGTC GCTGGAACTGAAGATGGTATCAAGGAGCCACAGGCTACATTTTCTGCCTGCTTTGGTGCA GCTTTTATAATGCTCCACCCAACTCGGTACGCTGCCATGCTGGCAGATAAGATGAACAAG CATGGAGCTACCGGATGGCTTGTCAACACTGGTTGGATCGGGGGAAGTTATGGTGTAGGT GAGCGAATCAGCTTGGCCTACACAAGGAAAATCATCGATGCCATTCACTCGGGTGAGCTT TTGGCTAGAAGCTACAAAAAGACAGATGTCTTTGGACTAGACATCCCCACAAAAGTGGAA GGAGTTCCATCTGAATTGCTTGACCCAATAAATACCTGGGAAGACAAAGACTCATACAAG TTGACACTTCTAAAGCTGTCAGATCTGTTCAAGAGAAATTTCAAGGTATTTGCAAATTAC AAGAAAGGTGGTGTTAGTGATCTGGCTGATGAGATTGCTGCTGCAGGACCAAATTTCTGA TTTTAATTGAATAGTAGTAGTATGTCTTAATGTATACCAAATAAAAGGGATTTTTTATGT TCCTCGAGGATGTATCGCAAGGTACCACTTATTTTAGTGTAAATTTTTATACCTCATGGT ACTTCTCTAGTGTAAAGTACCAAAAAGTATCATAAATTAACACTAAAATATGGTATCTCT CGTTACCTAGTCTTGTACGGTAAAACTGAACAAAATGCCCATTTTGAGGATGGTGACATA TATATATTAAAAGCTATTTCAGAGTGATGT