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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0203000-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:7334820:7337328:-1 gene:Os10g0203000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:immune related endonuclease description:Endonuclease/exonuclease/phosphatase domain containing protein. (Os10t0203000-01);Similar to predicted protein. (Os10t0203000-02)
Sequence

CTTTCCTCTGATAATGCCTTTTCCTGCTCAGGTCTTCTGACTGCTGTAAACAAGAACTAC
TTCCATGTCTTGAACTACCGGGAGCTTCTCTTCAATGATTTTGGAGATAGAGTTGCACAG
CTGTTGCATGTCGAATCAGCCATGCCTTTCTGGCAGAACCGAAGCAGCAGTTGCATCCAG
CAGCAGAGCCTCATTGTGAACACCCATTTGCTGTTCCCTCATGACCACAGCCTTTCAATA
GTTCGGCTGAAGCAGGTCTATAAGATCCTTCAGTACATAGAAGCTTATCAGGAAGAACAT
AAACTTGGTCCAATGCCAATCATCCTATGTGGTGACTGGAATGGAAGTAAACGTGGGCAA
GTTTACAAGTTCCTCCGATCACAGGGCTTTGTTTCGTCATATGACACTGCTCATCAGTAC
AGTGATAGCGAAGAAGATGCCCACAAGTGGGTGAGTCATCGGAACCATAGAGGAAACATC
TGTGGTGTTGATTTCATTTGGCTTCTAAATCCAAATAAGTCGAGGAAGCCCCTGAAAACT
AGCTGGAATGAAGCTGTCTTTGGTATCATCAAGTATCTTCTCCTCCAAGTAGCGTCCCTT
TCAGAGGAGAATGCATTTGCACTCCTCAAGGCTGACAGTCCTGATGATCAGATCACATAT
TCAAGCTTCTGCCAGGCACTTTGTCAGTTAGGGATGGTCCATCCTGATCGCCTAAACTCT
GAAGAAATTAAAGATCTGTGGAGTGAAGCTGACCATGACGGGGATGATATTGTTGACTAC
AAAGAATTTCAGCGGTGCATCTGGAGCCCTACATGCTGCAGCCAAGAGGAGGAGGATGAT
ACCGAAATCGACATCTCCGATGGAAGCCTTGTCACGTTTGAGGCGAACGATGAAGCCTTT
GGCTTTACTGTGAAGGAAGCTGTTCTCTTCCCCCCAGAAGTAGAGAAGGGCATGTGGCCT
GAGAACTATAGCCTTTCAGATCATGCTCCCCTTACTGTGGTATTCTCCCCTGTAAGAATG
CCTTGTTCTCCACGCACCCCTCGAACCCCCTAG

Peptide Sequence

PEP ID

Os10t0203000-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:7334820:7337328:-1 gene:Os10g0203000 transcript:Os10t0203000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:immune related endonuclease description:Endonuclease/exonuclease/phosphatase domain containing protein. (Os10t0203000-01);Similar to predicted protein. (Os10t0203000-02)
Sequence

LSSDNAFSCSGLLTAVNKNYFHVLNYRELLFNDFGDRVAQLLHVESAMPFWQNRSSSCIQ
QQSLIVNTHLLFPHDHSLSIVRLKQVYKILQYIEAYQEEHKLGPMPIILCGDWNGSKRGQ
VYKFLRSQGFVSSYDTAHQYSDSEEDAHKWVSHRNHRGNICGVDFIWLLNPNKSRKPLKT
SWNEAVFGIIKYLLLQVASLSEENAFALLKADSPDDQITYSSFCQALCQLGMVHPDRLNS
EEIKDLWSEADHDGDDIVDYKEFQRCIWSPTCCSQEEEDDTEIDISDGSLVTFEANDEAF
GFTVKEAVLFPPEVEKGMWPENYSLSDHAPLTVVFSPVRMPCSPRTPRTP

Transcript Sequence

Transcript ID

Os10t0203000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:7334820:7337328:-1 gene:Os10g0203000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:immune related endonuclease description:Endonuclease/exonuclease/phosphatase domain containing protein. (Os10t0203000-01);Similar to predicted protein. (Os10t0203000-02)
Sequence

AGTTGGTAACCTTGTTTTCAATATTGCTCGGAACTCTTAAATTTTTTGACATGATCCTTC
TCTTTAACTTTCCTCTGATAATGCCTTTTCCTGCTCAGGTCTTCTGACTGCTGTAAACAA
GAACTACTTCCATGTCTTGAACTACCGGGAGCTTCTCTTCAATGATTTTGGAGATAGAGT
TGCACAGCTGTTGCATGTCGAATCAGCCATGCCTTTCTGGCAGAACCGAAGCAGCAGTTG
CATCCAGCAGCAGAGCCTCATTGTGAACACCCATTTGCTGTTCCCTCATGACCACAGCCT
TTCAATAGTTCGGCTGAAGCAGGTCTATAAGATCCTTCAGTACATAGAAGCTTATCAGGA
AGAACATAAACTTGGTCCAATGCCAATCATCCTATGTGGTGACTGGAATGGAAGTAAACG
TGGGCAAGTTTACAAGTTCCTCCGATCACAGGGCTTTGTTTCGTCATATGACACTGCTCA
TCAGTACAGTGATAGCGAAGAAGATGCCCACAAGTGGGTGAGTCATCGGAACCATAGAGG
AAACATCTGTGGTGTTGATTTCATTTGGCTTCTAAATCCAAATAAGTCGAGGAAGCCCCT
GAAAACTAGCTGGAATGAAGCTGTCTTTGGTATCATCAAGTATCTTCTCCTCCAAGTAGC
GTCCCTTTCAGAGGAGAATGCATTTGCACTCCTCAAGGCTGACAGTCCTGATGATCAGAT
CACATATTCAAGCTTCTGCCAGGCACTTTGTCAGTTAGGGATGGTCCATCCTGATCGCCT
AAACTCTGAAGAAATTAAAGATCTGTGGAGTGAAGCTGACCATGACGGGGATGATATTGT
TGACTACAAAGAATTTCAGCGGTGCATCTGGAGCCCTACATGCTGCAGCCAAGAGGAGGA
GGATGATACCGAAATCGACATCTCCGATGGAAGCCTTGTCACGTTTGAGGCGAACGATGA
AGCCTTTGGCTTTACTGTGAAGGAAGCTGTTCTCTTCCCCCCAGAAGTAGAGAAGGGCAT
GTGGCCTGAGAACTATAGCCTTTCAGATCATGCTCCCCTTACTGTGGTATTCTCCCCTGT
AAGAATGCCTTGTTCTCCACGCACCCCTCGAACCCCCTAGCCATCAATTGTCAATACTTG
CGTGCATACAGGAAAAAAGAAGCCTTGTACAGCATTAGGGTATACTTTCAGAAATAGTGA
GATATACAGCAGATCCAGAGTTTAGGTACAAAATGGAGTAACATAGGGCGACTGAATAGT
TTTCTTTCCTTTTTTTTGTTTATTCGTTCGCCTTGAGTTGCTGTCTGTTGTATGTATCTA
AACATGGTTCCATGTTCATAAATGTAAATTTTGCTCTGTTTTTGTATGTATATGATTAAT
TACATTATGTC