Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0197000-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:6736206:6739956:-1 gene:Os10g0197000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3615 domain containing protein. (Os10t0197000-00)
Sequence	ATGGCGCTGGTGCCCAACTGCCCACCGGGACAGCGGATCTACCAGCCGAGTTTCAAGCGC GATTACCCGCTGGCCCAGGAGGTTTCGGAGTATAGATCGCGTCTGCTGCACAAAATCCAT CTCTCCTACTGCAAGGCGCTGGAGCGGCTCAGCCTCAGGGTGAGGCCCCGCATGGCTGCG AGCTTCGTCGGCGGCGGCGGCGGCTTCTGCTTGGGTCTCCTCGACCCTGTCTCCAACATC GTCGCCAACACCCTCTTCTCCTACGGGCGCGCGGTGGGCGACACCCGGAGCGAGTGTGAT GAGCTCGTCTACATCCCCCAAGAAAAGCTCAGGGACCTGGAGCACCGGTCGCTGGACGGC ATGGTGGCCTTCCTCACCCGCTTCTTCCCCTACCTCGCCGACGCCGAGGCCGTGCGCTTC CTTCTCTACGCCGAAGCCGACCTGCTCGTCGCCGCCCGCATCGTCGCGTTCGACATCGGC ATGAGGCGATTCGGGTCCTCCGGGCCAGACATCGTCAACGAGGCCCTCGAGATGGTCCTC AAGTGCGCCGCCCTCGCCGCCAAGCACCCAAACCCCGATCGCCTAGTCGCCGACTGGTTG GCCACCATCACCCGCCTCGACGACGCCGTGCGCCACCTCGCCGACGTGCACCGCCGCTCC CCTCAATCCAGCCTCGATAAGCTCGCCGAGCTGCTCGACGAGGGGTCGCCGCCGGCGGTA GACGACGACAGGTGGGGCCCGTGGCGACTCATGGATTCTCGTTTGCCTCCTCCCCGCAGC GTGCCGTACAGGCAATCCCCTGCCCTCAAGGCGACGCTCCAGGACGCGATCCATGGCTTC TACCTCAAGGCCCTTGCCCGGCTGCCGGCCAGAGAGCTTCGCCGCCGCTTCCACCGCAGC CTGCTCGAGGCTGGCCACTGCTATGGCCCGTTCGACCCTGTCTCCAACATCATCATCAAC ACCATCTGGTATGATGCAGCGTTCCCACCAACCTTTGAACTGGAGCTGGACGTGATCGGC ACAATGGGCCTGTACCGGATAGAGAATCGCTCCTTGTATGGCCTCGTCTCCTTCCTCTGC ACACGTTACCATCATATCGATTTCAATCAAGCTATCAAATACCTTGTCAATGCAGATGGT CACCTACTCCTCGCTGATCTCTACCTGGATGATGAGACAGCTGGGTTCACCACAGCTGTT GATTCCCCCCCGCTCACCGGTTTGGAGGAAGCATTCATGGCTGCCGCTACCGCTGCCTGT CACCCTGACCCTGATGCTCAAGCAAAGGTTTTGCTTCTCTGTTCATCTGGTCAAATGCTA GAGGATGCCTCATCGCTCCTGCACGGCGGTGGCCAACTCTCCTCTGAAGATGTTCAGTTG CTTGTCAGGTTGTTGTGTCCTGAGGCCACCTGCAGCAGACAGCCACTTCGCCCATTCCCA CGTCCAGAGTACTTGTTTGCGCATACACGAATGTCCGAAAAGGTCCATGCTGCATTGAGC ACATATGCTGCGATGCCAAATGGGGAACCCATGTATGAGCTGCATACCATCTGTGGCGTG AACAATTGCGTGTCGGGCCCAGTTGGCACTGATGCTAAGTGCTTTAGGTCTCATGTCAAT TTCCTAGCGACTCCCAAAGGCACTCCATTTTCTACCTACAGCAATCCGGTGCTTTTCTTT GCGGAGGTTAGCAATGATAACAAAGCCGAAGCTGGAACACAATCCTTCTGCTGCCTCGTG TCAGTGCCGTTACCATGCGCTGAACGAGTACGGTGTCTTTACTGTGATGACACGGGGATT AAGATCGTGCATCCTATTGGGGTAGACTTCCATGGGCGGAAGTTGGAATTTGAGAAGATG GTTTGTGGAGAAGACCCCTGCAATGACGATTTCGATCCTGAATCGATGCAGCCATATTAC ACCAACATGAGCATCATTGAGCATAGCAGCCTCACAACGGACAGGGTTAATGGTCGGGTG GAAGAGGATCGCCTTTACAGTGATGAATATGATAGTGATGATCTATCTTTGATGAGCGAT GAGTATGATAGTGATTTGTGTTCCATGACTGATGAGTATGGTTCTGCACATGCTTAA

Peptide Sequence

PEP ID	Os10t0197000-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:6736206:6739956:-1 gene:Os10g0197000 transcript:Os10t0197000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3615 domain containing protein. (Os10t0197000-00)
Sequence	MALVPNCPPGQRIYQPSFKRDYPLAQEVSEYRSRLLHKIHLSYCKALERLSLRVRPRMAA SFVGGGGGFCLGLLDPVSNIVANTLFSYGRAVGDTRSECDELVYIPQEKLRDLEHRSLDG MVAFLTRFFPYLADAEAVRFLLYAEADLLVAARIVAFDIGMRRFGSSGPDIVNEALEMVL KCAALAAKHPNPDRLVADWLATITRLDDAVRHLADVHRRSPQSSLDKLAELLDEGSPPAV DDDRWGPWRLMDSRLPPPRSVPYRQSPALKATLQDAIHGFYLKALARLPARELRRRFHRS LLEAGHCYGPFDPVSNIIINTIWYDAAFPPTFELELDVIGTMGLYRIENRSLYGLVSFLC TRYHHIDFNQAIKYLVNADGHLLLADLYLDDETAGFTTAVDSPPLTGLEEAFMAAATAAC HPDPDAQAKVLLLCSSGQMLEDASSLLHGGGQLSSEDVQLLVRLLCPEATCSRQPLRPFP RPEYLFAHTRMSEKVHAALSTYAAMPNGEPMYELHTICGVNNCVSGPVGTDAKCFRSHVN FLATPKGTPFSTYSNPVLFFAEVSNDNKAEAGTQSFCCLVSVPLPCAERVRCLYCDDTGI KIVHPIGVDFHGRKLEFEKMVCGEDPCNDDFDPESMQPYYTNMSIIEHSSLTTDRVNGRV EEDRLYSDEYDSDDLSLMSDEYDSDLCSMTDEYGSAHA

Transcript Sequence

Transcript ID	Os10t0197000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:6736206:6739956:-1 gene:Os10g0197000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3615 domain containing protein. (Os10t0197000-00)
Sequence	ATGGCGCTGGTGCCCAACTGCCCACCGGGACAGCGGATCTACCAGCCGAGTTTCAAGCGC GATTACCCGCTGGCCCAGGAGGTTTCGGAGTATAGATCGCGTCTGCTGCACAAAATCCAT CTCTCCTACTGCAAGGCGCTGGAGCGGCTCAGCCTCAGGGTGAGGCCCCGCATGGCTGCG AGCTTCGTCGGCGGCGGCGGCGGCTTCTGCTTGGGTCTCCTCGACCCTGTCTCCAACATC GTCGCCAACACCCTCTTCTCCTACGGGCGCGCGGTGGGCGACACCCGGAGCGAGTGTGAT GAGCTCGTCTACATCCCCCAAGAAAAGCTCAGGGACCTGGAGCACCGGTCGCTGGACGGC ATGGTGGCCTTCCTCACCCGCTTCTTCCCCTACCTCGCCGACGCCGAGGCCGTGCGCTTC CTTCTCTACGCCGAAGCCGACCTGCTCGTCGCCGCCCGCATCGTCGCGTTCGACATCGGC ATGAGGCGATTCGGGTCCTCCGGGCCAGACATCGTCAACGAGGCCCTCGAGATGGTCCTC AAGTGCGCCGCCCTCGCCGCCAAGCACCCAAACCCCGATCGCCTAGTCGCCGACTGGTTG GCCACCATCACCCGCCTCGACGACGCCGTGCGCCACCTCGCCGACGTGCACCGCCGCTCC CCTCAATCCAGCCTCGATAAGCTCGCCGAGCTGCTCGACGAGGGGTCGCCGCCGGCGGTA GACGACGACAGGTGGGGCCCGTGGCGACTCATGGATTCTCGTTTGCCTCCTCCCCGCAGC GTGCCGTACAGGCAATCCCCTGCCCTCAAGGCGACGCTCCAGGACGCGATCCATGGCTTC TACCTCAAGGCCCTTGCCCGGCTGCCGGCCAGAGAGCTTCGCCGCCGCTTCCACCGCAGC CTGCTCGAGGCTGGCCACTGCTATGGCCCGTTCGACCCTGTCTCCAACATCATCATCAAC ACCATCTGGTATGATGCAGCGTTCCCACCAACCTTTGAACTGGAGCTGGACGTGATCGGC ACAATGGGCCTGTACCGGATAGAGAATCGCTCCTTGTATGGCCTCGTCTCCTTCCTCTGC ACACGTTACCATCATATCGATTTCAATCAAGCTATCAAATACCTTGTCAATGCAGATGGT CACCTACTCCTCGCTGATCTCTACCTGGATGATGAGACAGCTGGGTTCACCACAGCTGTT GATTCCCCCCCGCTCACCGGTTTGGAGGAAGCATTCATGGCTGCCGCTACCGCTGCCTGT CACCCTGACCCTGATGCTCAAGCAAAGGTTTTGCTTCTCTGTTCATCTGGTCAAATGCTA GAGGATGCCTCATCGCTCCTGCACGGCGGTGGCCAACTCTCCTCTGAAGATGTTCAGTTG CTTGTCAGGTTGTTGTGTCCTGAGGCCACCTGCAGCAGACAGCCACTTCGCCCATTCCCA CGTCCAGAGTACTTGTTTGCGCATACACGAATGTCCGAAAAGGTCCATGCTGCATTGAGC ACATATGCTGCGATGCCAAATGGGGAACCCATGTATGAGCTGCATACCATCTGTGGCGTG AACAATTGCGTGTCGGGCCCAGTTGGCACTGATGCTAAGTGCTTTAGGTCTCATGTCAAT TTCCTAGCGACTCCCAAAGGCACTCCATTTTCTACCTACAGCAATCCGGTGCTTTTCTTT GCGGAGGTTAGCAATGATAACAAAGCCGAAGCTGGAACACAATCCTTCTGCTGCCTCGTG TCAGTGCCGTTACCATGCGCTGAACGAGTACGGTGTCTTTACTGTGATGACACGGGGATT AAGATCGTGCATCCTATTGGGGTAGACTTCCATGGGCGGAAGTTGGAATTTGAGAAGATG GTTTGTGGAGAAGACCCCTGCAATGACGATTTCGATCCTGAATCGATGCAGCCATATTAC ACCAACATGAGCATCATTGAGCATAGCAGCCTCACAACGGACAGGGTTAATGGTCGGGTG GAAGAGGATCGCCTTTACAGTGATGAATATGATAGTGATGATCTATCTTTGATGAGCGAT GAGTATGATAGTGATTTGTGTTCCATGACTGATGAGTATGGTTCTGCACATGCTTAA