Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0195000-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:6577603:6581966:1 gene:Os10g0195000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MATE efflux protein description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0195000-01)
Sequence	ATGGAGGGGCAAGGTCTTGTGAGCCGGAGCTGGCAGGAGTCGAAGCTGCTGTGGCGCGTC GCCTTCCCGGCCGTGCTCGTCGAGTTGCTCCAGTTCTCCATCGGCTTCGTCACGGCCAGC TTCGTCGGCCACCTCGGCGTGGTCGAGCTCGCCGCGGTCACCGCCGTCGAGAGCATCCTG GAGGGCTTCGCCTACGGCGTCCTGTTTGGCATGGGGTGCGCGCTGGACACGCTGTGCGGG CAGGCGGTGGGCGCCGGGCGGCTGGACGTGCTCGGCCTCTACGTGCAGCAGTCGTGGATC GTGTGCGGCGCCACCGCGGTGGCGCTCACGCCGACGTACGCCTTCGCCGAGCCGATCCTG CGGTCGCTCCTCCGGCAGCCGGCCGACGTCGCCGCCGTGGCGGGGCCGTACGCGCTGTGG TCGCTGCCGCGGCTGTTCGCGCACGCCGCCAACTTCCCGCTCCAGAAGTTCTTCCAGACG CAGAGCAGGGTCTGGGCGCTCGCCGCCATCTCCGCCGCGGTGCTCGCCGTGCACGCCGCG CTCACCTACGCCGCCGTGGTCAGGCTCCGGTACGGCCTGCGCGGTGCGGCCGTCGCCGGC AACCTGTCCTACTGGCTCATCGACGCCGCGCAGTTCGTCTACCTTGTCTCCGGCCGCTTC CCGGACGCGTGGAAGGGGTTCACCATGACGGCGTTCAGCAACCTCGCCGCGTTCGTCAAG CTGTCACTTGTGTCGGCCATCATGATCTGCTTGGAGTTTTGGTACTACGCTGCACTACTC ATTCTTGTGGGTCTCCTTAAGAATGCCAGACTCCAGCTTGATATCATGTCAATTTGCATC AATTACCAGTTCTGGACCATGATGGTTGCGATGGGCTTCAGCGAAGCAATCAGCGTCAGA GTATCAAATGAGCTCGGTGCGAGAAGACCAAAGGAGGCAAAGTTCTCAGTGGCAGTGGCA TCATTAACATCGGCCATGATTGGTGCCATTTTCATGTCAATCTTCTTCATTTGGAGAACA AGCTTGCCAAGCCTCTTCAGCGACGACAAGGAGGTGGTAGACGGAGCTGCAAGATTGGGG TATCTACTTGCTGTCACCGTCTTTTTTGGCAATATCGGGCCTGTGCTTTCAGGTGTGGCA GTAGGAGCAGGTTGGCAAATTCTGGTGGCATTTGTGAACATCGGTTGCTACTACTTGGTA GGGATCCCATTTGGGGTTCTCTTTGGCTTCAAGCTAAAGCTTGGTGCATTGGGGATATGG ATGGGCATGTTGACAGGAACATTACTCCAGATGGCCATACTATTTTTCATTATCATGAGA ACAAAGTGGGAGGCACAGGCAATATTGGCGGAAAAAAGGATCAGTGAGTTAGGAGAAACA ACGGCCAATGATTGA

Peptide Sequence

PEP ID	Os10t0195000-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:6577603:6581966:1 gene:Os10g0195000 transcript:Os10t0195000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MATE efflux protein description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0195000-01)
Sequence	MEGQGLVSRSWQESKLLWRVAFPAVLVELLQFSIGFVTASFVGHLGVVELAAVTAVESIL EGFAYGVLFGMGCALDTLCGQAVGAGRLDVLGLYVQQSWIVCGATAVALTPTYAFAEPIL RSLLRQPADVAAVAGPYALWSLPRLFAHAANFPLQKFFQTQSRVWALAAISAAVLAVHAA LTYAAVVRLRYGLRGAAVAGNLSYWLIDAAQFVYLVSGRFPDAWKGFTMTAFSNLAAFVK LSLVSAIMICLEFWYYAALLILVGLLKNARLQLDIMSICINYQFWTMMVAMGFSEAISVR VSNELGARRPKEAKFSVAVASLTSAMIGAIFMSIFFIWRTSLPSLFSDDKEVVDGAARLG YLLAVTVFFGNIGPVLSGVAVGAGWQILVAFVNIGCYYLVGIPFGVLFGFKLKLGALGIW MGMLTGTLLQMAILFFIIMRTKWEAQAILAEKRISELGETTAND

Transcript Sequence

Transcript ID	Os10t0195000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:6577603:6581966:1 gene:Os10g0195000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MATE efflux protein description:Multi antimicrobial extrusion protein MatE family protein. (Os10t0195000-01)
Sequence	TTGCAAGATGCAGATGGTGGTAAAGCTGTAAATAATAGTGGTGGTATACGTGGTACGGTG AGCATGGAGGGGCAAGGTCTTGTGAGCCGGAGCTGGCAGGAGTCGAAGCTGCTGTGGCGC GTCGCCTTCCCGGCCGTGCTCGTCGAGTTGCTCCAGTTCTCCATCGGCTTCGTCACGGCC AGCTTCGTCGGCCACCTCGGCGTGGTCGAGCTCGCCGCGGTCACCGCCGTCGAGAGCATC CTGGAGGGCTTCGCCTACGGCGTCCTGTTTGGCATGGGGTGCGCGCTGGACACGCTGTGC GGGCAGGCGGTGGGCGCCGGGCGGCTGGACGTGCTCGGCCTCTACGTGCAGCAGTCGTGG ATCGTGTGCGGCGCCACCGCGGTGGCGCTCACGCCGACGTACGCCTTCGCCGAGCCGATC CTGCGGTCGCTCCTCCGGCAGCCGGCCGACGTCGCCGCCGTGGCGGGGCCGTACGCGCTG TGGTCGCTGCCGCGGCTGTTCGCGCACGCCGCCAACTTCCCGCTCCAGAAGTTCTTCCAG ACGCAGAGCAGGGTCTGGGCGCTCGCCGCCATCTCCGCCGCGGTGCTCGCCGTGCACGCC GCGCTCACCTACGCCGCCGTGGTCAGGCTCCGGTACGGCCTGCGCGGTGCGGCCGTCGCC GGCAACCTGTCCTACTGGCTCATCGACGCCGCGCAGTTCGTCTACCTTGTCTCCGGCCGC TTCCCGGACGCGTGGAAGGGGTTCACCATGACGGCGTTCAGCAACCTCGCCGCGTTCGTC AAGCTGTCACTTGTGTCGGCCATCATGATCTGCTTGGAGTTTTGGTACTACGCTGCACTA CTCATTCTTGTGGGTCTCCTTAAGAATGCCAGACTCCAGCTTGATATCATGTCAATTTGC ATCAATTACCAGTTCTGGACCATGATGGTTGCGATGGGCTTCAGCGAAGCAATCAGCGTC AGAGTATCAAATGAGCTCGGTGCGAGAAGACCAAAGGAGGCAAAGTTCTCAGTGGCAGTG GCATCATTAACATCGGCCATGATTGGTGCCATTTTCATGTCAATCTTCTTCATTTGGAGA ACAAGCTTGCCAAGCCTCTTCAGCGACGACAAGGAGGTGGTAGACGGAGCTGCAAGATTG GGGTATCTACTTGCTGTCACCGTCTTTTTTGGCAATATCGGGCCTGTGCTTTCAGGTGTG GCAGTAGGAGCAGGTTGGCAAATTCTGGTGGCATTTGTGAACATCGGTTGCTACTACTTG GTAGGGATCCCATTTGGGGTTCTCTTTGGCTTCAAGCTAAAGCTTGGTGCATTGGGGATA TGGATGGGCATGTTGACAGGAACATTACTCCAGATGGCCATACTATTTTTCATTATCATG AGAACAAAGTGGGAGGCACAGGCAATATTGGCGGAAAAAAGGATCAGTGAGTTAGGAGAA ACAACGGCCAATGATTGAGAACACATAATTGTACAGATGACCACTGAACTCCCAAATATA TGGAAATTGGCAAACAGACGAGCTGGAAAAAAATATATAGAATTTACATGTCTCAAGATC AAGCCCATGACTTTATATATTTTATAAAGGTTTTAGGACATTGTATTTCCTATTTGTTTG CATGGATCGATAATCAGCATAGCATAGAATTGACTTTTGTTCATGTTTAATTTTTAAAGG AACTAGTTTTAAACCCACAATCTCACAATTGAGGATCTTTATTTGTACCTATAAAGGCCC