Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0194200-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:6540786:6544129:1 gene:Os10g0194200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CINNAMYL ALCOHOL DEHYDROGENASE 1 description:Similar to Mannitol dehydrogenase. (Os10t0194200-01)
Sequence

ATGGCTGCTGAATGTGGAAGTGGCAACTGTGATGCTTGGGCAGCGAGAGATCCTTCAGGG
ATCCTCTCCCCGTACAAGTTCAACCGCAGGGCTGTACAAAGTGACGATGTTTCCTTGAGG
ATCACACACTGTGGTGTTTGTTATGCTGATGTTGCATGGACAAGGAATATACTCAACAAT
TCGATGTACCCTTTAGTCCCTGGGCATGAGATAGCAGGAGTTGTAACTGAGGTTGGTGCA
GACGTCAAGAGCTTCAAAGTGGGTGACCATGTAGGTGTTGGCACATACGTGAATTCATGC
CGGGACTGTGAGAACTGCAATAGCTCTCTAGAGAACTACTGCTCACAACATGTCTTCACT
TTCAATGGTGTTGACACTGATGGGACTGTCACAAAGGGAGGATATTCTACTCACATAGTA
GTACATGAGAGGTATTGCTTTAAAATACCTGATGGCTACCCTTTGGAAAAGGCAGCACCT
TTACTTTGTGCTGGCATCACTGTATATAGTCCGATGATGCGGCATAATATGAACCAGCCA
GGGAAGTCACTCGGCGTCATTGGACTTGGTGGCTTGGGTCACATGGCAGTAAAATTTGGG
AAAGCCTTTGGACTGAAAGTCACAGTTATTAGTACTAGTGAATCAAAGAGAAAAGAAGCT
ATTGACCTTCTTGGTGCAGATAATTTCGTGGTGTCATCGGATGAAAATCAGATGGAGACC
TTGAAAAGCTCTCTGAACTTCATTATTGACACAGCCTCCGGCGATCACCCATTCGATCCT
TATCTCACGCTTCTGAAAGTTGGTGGTGTAATGGCACTACTTAGCTTCCCAAGTGAAATC
AAAGTGCATCCTGCAAACCTTAATCTCGGTGGGCGGAGTTTATCTGGTAGTGTAACTGGA
GGTACGAAGGACATCCAGGAGATGATAAACTTCTGTGCGGCAAACAAAATCTACCCAGAT
ATCGAGATGATCAAGATAGATTACATCAACGAGGCTCTTCAGAGGCTTGTTGACCGGGAT
GTCAGATTTCGCTTTGTAATCGACATTGAGAACTCGTTCAAGTAG

Peptide Sequence

PEP ID

Os10t0194200-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:6540786:6544129:1 gene:Os10g0194200 transcript:Os10t0194200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CINNAMYL ALCOHOL DEHYDROGENASE 1 description:Similar to Mannitol dehydrogenase. (Os10t0194200-01)
Sequence

MAAECGSGNCDAWAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNN
SMYPLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFT
FNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQP
GKSLGVIGLGGLGHMAVKFGKAFGLKVTVISTSESKRKEAIDLLGADNFVVSSDENQMET
LKSSLNFIIDTASGDHPFDPYLTLLKVGGVMALLSFPSEIKVHPANLNLGGRSLSGSVTG
GTKDIQEMINFCAANKIYPDIEMIKIDYINEALQRLVDRDVRFRFVIDIENSFK

Transcript Sequence

Transcript ID

Os10t0194200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:6540786:6544129:1 gene:Os10g0194200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CINNAMYL ALCOHOL DEHYDROGENASE 1 description:Similar to Mannitol dehydrogenase. (Os10t0194200-01)
Sequence

AGGGCCGTAAAGGAAAATCTTCCGTGTCGTCGTCTCCTCCGCTCCTTGCGCCAAGACGAG
TCGCGGCTCAACAGCGGAGAGGCGGCGATCTCCCATCTGGCGAGCAGAGCAGGGGAGGGG
AAGGGATCTTGTTAGAGTGGCATGGCTGCTGAATGTGGAAGTGGCAACTGTGATGCTTGG
GCAGCGAGAGATCCTTCAGGGATCCTCTCCCCGTACAAGTTCAACCGCAGGGCTGTACAA
AGTGACGATGTTTCCTTGAGGATCACACACTGTGGTGTTTGTTATGCTGATGTTGCATGG
ACAAGGAATATACTCAACAATTCGATGTACCCTTTAGTCCCTGGGCATGAGATAGCAGGA
GTTGTAACTGAGGTTGGTGCAGACGTCAAGAGCTTCAAAGTGGGTGACCATGTAGGTGTT
GGCACATACGTGAATTCATGCCGGGACTGTGAGAACTGCAATAGCTCTCTAGAGAACTAC
TGCTCACAACATGTCTTCACTTTCAATGGTGTTGACACTGATGGGACTGTCACAAAGGGA
GGATATTCTACTCACATAGTAGTACATGAGAGGTATTGCTTTAAAATACCTGATGGCTAC
CCTTTGGAAAAGGCAGCACCTTTACTTTGTGCTGGCATCACTGTATATAGTCCGATGATG
CGGCATAATATGAACCAGCCAGGGAAGTCACTCGGCGTCATTGGACTTGGTGGCTTGGGT
CACATGGCAGTAAAATTTGGGAAAGCCTTTGGACTGAAAGTCACAGTTATTAGTACTAGT
GAATCAAAGAGAAAAGAAGCTATTGACCTTCTTGGTGCAGATAATTTCGTGGTGTCATCG
GATGAAAATCAGATGGAGACCTTGAAAAGCTCTCTGAACTTCATTATTGACACAGCCTCC
GGCGATCACCCATTCGATCCTTATCTCACGCTTCTGAAAGTTGGTGGTGTAATGGCACTA
CTTAGCTTCCCAAGTGAAATCAAAGTGCATCCTGCAAACCTTAATCTCGGTGGGCGGAGT
TTATCTGGTAGTGTAACTGGAGGTACGAAGGACATCCAGGAGATGATAAACTTCTGTGCG
GCAAACAAAATCTACCCAGATATCGAGATGATCAAGATAGATTACATCAACGAGGCTCTT
CAGAGGCTTGTTGACCGGGATGTCAGATTTCGCTTTGTAATCGACATTGAGAACTCGTTC
AAGTAGTATCTTGATATCTTCAGTACACCATTAATGATAGAAGTGTATGCAATAATAATA
AGTTTAAATGTCCTACAAGATGATGAGACCATGAGACAGTTCCAGAACAAAATGTTCCAT
TTTAAGAAGCAATTTGGTTCTGTTTTCAGTTATTTTCAGGAGTAAATTGTATTGGTGGTA
CACAAACTTATTTGGTGGGTGTAATTTAATACATAAACTTGTTTGTTGGGTGTAATTTAG
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