Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0193100-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:6484463:6486741:1 gene:Os10g0193100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0193100-00)
Sequence

ATGGACAGAGTGGACTCAGTGGTGATCACACGTTCTCTCGTTCATGAACTGATATATAAT
ATACTCTATATATACTCGAAGAAATCCTGCGGCATCAATCGCGCTCTCGTCACACCCCTC
GGACATACAGCAATCATGGAACACATCCGCTCTTTCCTCCTAGCAGCACTGGCAGTCGTG
GTGGCCGCGGCCACGGCGGCGGCGGCGGGGCTACCGCCGCTGCCATCCACAATGCCGGCG
GACGTGCCGCAGCCGGAGATCCCGCCGTGCCTGAACGACCTGATGCCATGCGCGTCCGTG
TACGACGACAGCTCCATGCTGGGGCCGTGCTGCGACGCGCTGGGGAAGGTGTTCAAGAGC
GATCGGGCGTGCCTCTGCCAGATCTGGGAGATGGCCAGAAACGACACCAGGCAGGTCGGG
AGCAACGCCCTCGACGGCGATCAGCAAATGTTCGCCCGGTGCAAGATCCCTGGCGCTTCC
TCCACCATCTGCGACAACGGGCAAGCAGGTCATGGAACATCGGCAGGCTACTCCTCGACA
GGCTCCCAAGCAAGAAATGCCTCACCTCACTCGAGGTTGACCGAGGCATTCCGGATCTTT
CTTCTCCTTCAAATACTGTTCATTTTGGGAGTGTGA

Peptide Sequence

PEP ID

Os10t0193100-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:6484463:6486741:1 gene:Os10g0193100 transcript:Os10t0193100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0193100-00)
Sequence

MDRVDSVVITRSLVHELIYNILYIYSKKSCGINRALVTPLGHTAIMEHIRSFLLAALAVV
VAAATAAAAGLPPLPSTMPADVPQPEIPPCLNDLMPCASVYDDSSMLGPCCDALGKVFKS
DRACLCQIWEMARNDTRQVGSNALDGDQQMFARCKIPGASSTICDNGQAGHGTSAGYSST
GSQARNASPHSRLTEAFRIFLLLQILFILGV

Transcript Sequence

Transcript ID

Os10t0193100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:6484463:6486741:1 gene:Os10g0193100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0193100-00)
Sequence

ATGGACAGAGTGGACTCAGTGGTGATCACACGTTCTCTCGTTCATGAACTGATATATAAT
ATACTCTATATATACTCGAAGAAATCCTGCGGCATCAATCGCGCTCTCGTCACACCCCTC
GGACATACAGCAATCATGGAACACATCCGCTCTTTCCTCCTAGCAGCACTGGCAGTCGTG
GTGGCCGCGGCCACGGCGGCGGCGGCGGGGCTACCGCCGCTGCCATCCACAATGCCGGCG
GACGTGCCGCAGCCGGAGATCCCGCCGTGCCTGAACGACCTGATGCCATGCGCGTCCGTG
TACGACGACAGCTCCATGCTGGGGCCGTGCTGCGACGCGCTGGGGAAGGTGTTCAAGAGC
GATCGGGCGTGCCTCTGCCAGATCTGGGAGATGGCCAGAAACGACACCAGGCAGGTCGGG
AGCAACGCCCTCGACGGCGATCAGCAAATGTTCGCCCGGTGCAAGATCCCTGGCGCTTCC
TCCACCATCTGCGACAACGGGCAAGCAGGTCATGGAACATCGGCAGGCTACTCCTCGACA
GGCTCCCAAGCAAGAAATGCCTCACCTCACTCGAGGTTGACCGAGGCATTCCGGATCTTT
CTTCTCCTTCAAATACTGTTCATTTTGGGAGTGTGA