Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0189600-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:6208990:6213955:-1 gene:Os10g0189600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os10t0189600-01);Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os10t0189600-02)
Sequence	ATGATGGAAATGGTATTGCCAGTCGCGAATGCTACGGCTGCGGCACTTGCACGGGTTTCT GCTGTGTTCAATGCCCCACTTGCCCGTGCTGTTGTCTTTGGGATTCATATTGATGGACAT TTGGTTGTGGAAGGGCTTCTCATTGCTGCCATACTGTTTCAGCTCTCCAGGAAGAGCTAC AAACCTCCAAAGAAGCCACTCACTGAGAGGGAGGTTGATGAGCTCTGTGATGACTGGCAA CCGGAGCCTCTATGCCCACCCATCAAGGAAGGAGCACGGATCGACACGCCTACATTAGAA AGTGCTGCTGGACCTCATACAACTGTTGATGGAAAAGAAGTTGTAAACTTTGCATCAGCA AACTACCTTGGTTTGATTGGCAATGAAAAGATAATTGATTCCTGTGTTGGCTCAGTGGAG AAATATGGTGTTGGATCATGTGGACCACGAAGCTTTTATGGAACTATTGATGTGCACCTT GACTGCGAGAGTAAAATAGCAAATTTCCTGGGAACCCAAGATTCAATCTTGTACTCCTAT GGGATATCAACCATCTTCAGTGTAATTCCTGCCTTTTGCAAGAAGGGAGATATCATTGTA GCTGATGAGGGTGTTCACTGGGCTGTGCAAAATGGTTTACAGCTTTCAAGAAGCACTGTT GTATATTTCAAGCATAATGACATGGCTTCACTTGCGAGCATTTTGGAAAAACTAACTCAT GGAAACAAACATACAGAAAAGATTAGGCGCTATATTGTTGTGGAAGCTATTTACCAGAAT TCTGGCCAAATTGCTCCCTTGGATGAGATAGTTCGGTTGAAGGAGAAATACCGGTTTCGT GTTATATTGGAGGAGAGCCATTCTTTTGGTGTTCTTGGCAAGTCTGGACGTGGCCTTGCT GAACACTATGGAGTTCCTGTGGAAAAAATAGACATTATTACTGCTGGAATGGGAAATGCG TTAGCTACCGATGGTGGTTTTTGTACAGGAAGTGTCAGAGTTGTTGATCATCAGCGTCTA AGCAGCTCTGGTTATGTTTTTTCTGCCTCGTTGCCACCATACCTTGCTAGTGCAGCAATG TCTGCTGTGAACCACCTGGAGGAGAACCCATCAGTTCTCGCCAATCTAAGATCAAACATC GCCCTTCTGCATAAAGAGTTGTCAGATATACCCGGGCTCGAAATTGCTAGCAATATCTTG TCACCTATTGTCTTTCTCAAATTGAAGACACCAACCGGTTCTGCTGTTGCTGACCTGGAA CTCCTTGAGATTATTGCAGAGAAGGTCTTGATGGAAGATTCAGTCTTCATTGCAGCAACA AAGAGGTCGAGTTTGGACAAGTGTCGGCTCCCGGTTGGAATCCGCTTATTCGTGTCAGCT GGTCACACTGAATCTGACATCTTCAAAGTATCTGCATCCCTGAAGAGGGTTGCAGCATCA GTTGTCTAG

Peptide Sequence

PEP ID	Os10t0189600-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:6208990:6213955:-1 gene:Os10g0189600 transcript:Os10t0189600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os10t0189600-01);Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os10t0189600-02)
Sequence	MMEMVLPVANATAAALARVSAVFNAPLARAVVFGIHIDGHLVVEGLLIAAILFQLSRKSY KPPKKPLTEREVDELCDDWQPEPLCPPIKEGARIDTPTLESAAGPHTTVDGKEVVNFASA NYLGLIGNEKIIDSCVGSVEKYGVGSCGPRSFYGTIDVHLDCESKIANFLGTQDSILYSY GISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFKHNDMASLASILEKLTH GNKHTEKIRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVILEESHSFGVLGKSGRGLA EHYGVPVEKIDIITAGMGNALATDGGFCTGSVRVVDHQRLSSSGYVFSASLPPYLASAAM SAVNHLEENPSVLANLRSNIALLHKELSDIPGLEIASNILSPIVFLKLKTPTGSAVADLE LLEIIAEKVLMEDSVFIAATKRSSLDKCRLPVGIRLFVSAGHTESDIFKVSASLKRVAAS VV

Transcript Sequence

Transcript ID	Os10t0189600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:6208990:6213955:-1 gene:Os10g0189600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os10t0189600-01);Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os10t0189600-02)
Sequence	GCCACAGACCCCAAAGGTCTGATAAGTCTTTGATTTGCTAGTACCGGCATCGCCTGCTTC GCTTTCGTCACGTTCTTGATTTGGGCGGGCGCGGAGATTTAGAACGGTGCTGAATTTACA ATCTTGGGACCAAGAGGAGAACTACTCTCAATGATGGAAATGGTATTGCCAGTCGCGAAT GCTACGGCTGCGGCACTTGCACGGGTTTCTGCTGTGTTCAATGCCCCACTTGCCCGTGCT GTTGTCTTTGGGATTCATATTGATGGACATTTGGTTGTGGAAGGGCTTCTCATTGCTGCC ATACTGTTTCAGCTCTCCAGGAAGAGCTACAAACCTCCAAAGAAGCCACTCACTGAGAGG GAGGTTGATGAGCTCTGTGATGACTGGCAACCGGAGCCTCTATGCCCACCCATCAAGGAA GGAGCACGGATCGACACGCCTACATTAGAAAGTGCTGCTGGACCTCATACAACTGTTGAT GGAAAAGAAGTTGTAAACTTTGCATCAGCAAACTACCTTGGTTTGATTGGCAATGAAAAG ATAATTGATTCCTGTGTTGGCTCAGTGGAGAAATATGGTGTTGGATCATGTGGACCACGA AGCTTTTATGGAACTATTGATGTGCACCTTGACTGCGAGAGTAAAATAGCAAATTTCCTG GGAACCCAAGATTCAATCTTGTACTCCTATGGGATATCAACCATCTTCAGTGTAATTCCT GCCTTTTGCAAGAAGGGAGATATCATTGTAGCTGATGAGGGTGTTCACTGGGCTGTGCAA AATGGTTTACAGCTTTCAAGAAGCACTGTTGTATATTTCAAGCATAATGACATGGCTTCA CTTGCGAGCATTTTGGAAAAACTAACTCATGGAAACAAACATACAGAAAAGATTAGGCGC TATATTGTTGTGGAAGCTATTTACCAGAATTCTGGCCAAATTGCTCCCTTGGATGAGATA GTTCGGTTGAAGGAGAAATACCGGTTTCGTGTTATATTGGAGGAGAGCCATTCTTTTGGT GTTCTTGGCAAGTCTGGACGTGGCCTTGCTGAACACTATGGAGTTCCTGTGGAAAAAATA GACATTATTACTGCTGGAATGGGAAATGCGTTAGCTACCGATGGTGGTTTTTGTACAGGA AGTGTCAGAGTTGTTGATCATCAGCGTCTAAGCAGCTCTGGTTATGTTTTTTCTGCCTCG TTGCCACCATACCTTGCTAGTGCAGCAATGTCTGCTGTGAACCACCTGGAGGAGAACCCA TCAGTTCTCGCCAATCTAAGATCAAACATCGCCCTTCTGCATAAAGAGTTGTCAGATATA CCCGGGCTCGAAATTGCTAGCAATATCTTGTCACCTATTGTCTTTCTCAAATTGAAGACA CCAACCGGTTCTGCTGTTGCTGACCTGGAACTCCTTGAGATTATTGCAGAGAAGGTCTTG ATGGAAGATTCAGTCTTCATTGCAGCAACAAAGAGGTCGAGTTTGGACAAGTGTCGGCTC CCGGTTGGAATCCGCTTATTCGTGTCAGCTGGTCACACTGAATCTGACATCTTCAAAGTA TCTGCATCCCTGAAGAGGGTTGCAGCATCAGTTGTCTAGTGAGTTTATACGGCTGTTGAG CGACTGTTGATCTCAGCTTCTTACATGATGTGTCCTACATTTAGGTACATAATTTGTATG TTCATCGATCTGGCGCAATTCATTGTCATATTTACCAAGAATACAAATAAGATTTTGTAG CATAGTTTGAATTAAGGATCTGATAGCTTCGCTCTTGTGTAGTATATGTGTGCATTGGCT GATTTCTTCAACCGTCTAGCACTACTACATTGCTTACATAGTGATGTAGTTTTCTCATTT TCTCTCCTCTGTCAAGAACTCTTGAAAGTAGTAGTGAAAAAATGGATAAATTGTATTGTG