Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0188100-03
CDS Infomation	cds chromosome:IRGSP-1.0:10:6080212:6087779:-1 gene:Os10g0188100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0188100-01);Similar to transcription initiation factor IIF, alpha subunit. (Os10t0188100-02);Transcription initiation factor IIF, alpha subunit family protein. (Os10t0188100-03);Conserved hypothetical protein. (Os10t0188100-04)
Sequence	ATGGGGAGCGCCGACCTGGTGCTGAAGGCGGCGTGCGAGGGCTGCGGCTCGCCGTCGGAC CTCTACGGCACGTCGTGCAAGCACACCACGCTCTGCAGCTCCTGCGGCAAATCCATGGCG CTCTCCGGCGCCCGCTGCCTCGTCTGCTCGGCCCCCATCACCAACCTCATCAGGGAATAT AATGTACGGGCCAATGCCACCACAGATAAGAGCTTCTCTATTGGAAGATTTGTGACTGGT TTACCCCCTTTCTCAAAAAAGAAGAGTGCGGAAAACAAATGGTCTCTTCATAAGGAGGGG TTACAAGGTCGCCAGATTCCTGAGAATATGCGGGAAAAATACAATAGGAAGCCATGGATT TTGGAAGATGAAACTGGGCAATATCAGTATCAAGGTCAAATGGAGGGATCACAGTCATCA ACAGCTACATACTATTTGTTGATGATGCATGGCAAGGAATTTCATGCATATCCTGCTGGT TCTTGGTATAACTTCAGTAAAATTGCACAGTACAAACAACTTACCCTGGAAGAGGCTGAA GAGAAGATGAATAAGAGAAAAACTAGTGCAACTGGTTATGAACGTTGGATGATGAAAGCA GCTACAAATGGGCCGGCTGCCTTTGGTTCAGACGTAAAGAAACTTGAGCCTACAAATGGC ACTGAAAAAGAAAATGCCCGCCCCAAGAAAGGGAAAAATAATGAAGAGGGTAACAATTCT GATAAAGGCGAGGAGGATGAAGAAGAGGAAGCTGCACGCAAAAATAGGCTTGCGCTCAAC AAAAAAAGTATGGATGACGATGAGGAAGGTGGAAAGGATCTGGACTTCGATTTGGATGAT GAAATTGAAAAAGGTGATGACTGGGAGCACGAAGAAACATTCACTGACGACGATGAGGCT GTGGATATAGACCCAGAGGAGCGGGCAGATTTAGCTCCTGAGATTCCCGCTCCTCCTGAA ATTAAGCAGGATGATGAAGAGAATGAAGAAGAGGGTGGTCTGAGCAAGTCTGGCAAGGAG TTGAAAAAGCTTCTTGGGAAAGCTGCTGGACTTAATGAGTCAGATGCCGATGAGGATGAC GAAGATGATGACCAGGAGGATGAGTCATCTCCAGTGCTTGCTCCAAAACAGAAGGATCAA CCCAAAGATGAACCTGTAGATAACAGCCCCGCTAAACCAACACCATCAGGACATGCTCGT GGCACACCTCCTGCATCCAAATCGAAGCAAAAGAGGAAATCAGGTGGTGGTGATGATTCA AAAGCATCTGGCGGTGCAGCTTCCAAAAAAGCAAAGGATACAAAACCATCAGTGGCCAAA GATGAGACACCATCTTCCTCAAAACCTGCATCGAAGGCCACTGCTGCATCAAAAACTAGT GCAAATGTATCTCCTGTCACAGAGGATGAAATCAGGACTGTTCTTCTTGCTGTTGCTCCT GTCACTACACAAGATTTGGTATCTAGATTTAAGTCTAGACTACGAGGTCCAGAGGACAAG AATGCTTTTGCTGAAATTCTGAAGAAAATATCGAAGATTCAGAAGACTAATGGCCACAAT TATGTCGTCCTTAGAGATGACAAGAAGTGA

Peptide Sequence

PEP ID	Os10t0188100-03
PEP Infomation	pep chromosome:IRGSP-1.0:10:6080212:6087779:-1 gene:Os10g0188100 transcript:Os10t0188100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0188100-01);Similar to transcription initiation factor IIF, alpha subunit. (Os10t0188100-02);Transcription initiation factor IIF, alpha subunit family protein. (Os10t0188100-03);Conserved hypothetical protein. (Os10t0188100-04)
Sequence	MGSADLVLKAACEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREY NVRANATTDKSFSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI LEDETGQYQYQGQMEGSQSSTATYYLLMMHGKEFHAYPAGSWYNFSKIAQYKQLTLEEAE EKMNKRKTSATGYERWMMKAATNGPAAFGSDVKKLEPTNGTEKENARPKKGKNNEEGNNS DKGEEDEEEEAARKNRLALNKKSMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGKAAGLNESDADEDD EDDDQEDESSPVLAPKQKDQPKDEPVDNSPAKPTPSGHARGTPPASKSKQKRKSGGGDDS KASGGAASKKAKDTKPSVAKDETPSSSKPASKATAASKTSANVSPVTEDEIRTVLLAVAP VTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVLRDDKK

Transcript Sequence

Transcript ID	Os10t0188100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:6080212:6087779:-1 gene:Os10g0188100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0188100-01);Similar to transcription initiation factor IIF, alpha subunit. (Os10t0188100-02);Transcription initiation factor IIF, alpha subunit family protein. (Os10t0188100-03);Conserved hypothetical protein. (Os10t0188100-04)
Sequence	ACTCCACGAGAGACGACCCAAACCGGCCGCCACCGCCGCCGCGATCCCCCACCTCCGCTC GCCGGAAGGGGCGCCGTAGCCCCGCCCCTCCCCTCCCCCCTCTCCGGTGGCTGGCCCCTC TCCGGCGATGGGGAGCGCCGACCTGGTGCTGAAGGCGGCGTGCGAGGGCTGCGGCTCGCC GTCGGACCTCTACGGCACGTCGTGCAAGCACACCACGCTCTGCAGCTCCTGCGGCAAATC CATGGCGCTCTCCGGCGCCCGCTGCCTCGTCTGCTCGGCCCCCATCACCAACCTCATCAG GGAATATAATGTACGGGCCAATGCCACCACAGATAAGAGCTTCTCTATTGGAAGATTTGT GACTGGTTTACCCCCTTTCTCAAAAAAGAAGAGTGCGGAAAACAAATGGTCTCTTCATAA GGAGGGGTTACAAGGTCGCCAGATTCCTGAGAATATGCGGGAAAAATACAATAGGAAGCC ATGGATTTTGGAAGATGAAACTGGGCAATATCAGTATCAAGGTCAAATGGAGGGATCACA GTCATCAACAGCTACATACTATTTGTTGATGATGCATGGCAAGGAATTTCATGCATATCC TGCTGGTTCTTGGTATAACTTCAGTAAAATTGCACAGTACAAACAACTTACCCTGGAAGA GGCTGAAGAGAAGATGAATAAGAGAAAAACTAGTGCAACTGGTTATGAACGTTGGATGAT GAAAGCAGCTACAAATGGGCCGGCTGCCTTTGGTTCAGACGTAAAGAAACTTGAGCCTAC AAATGGCACTGAAAAAGAAAATGCCCGCCCCAAGAAAGGGAAAAATAATGAAGAGGGTAA CAATTCTGATAAAGGCGAGGAGGATGAAGAAGAGGAAGCTGCACGCAAAAATAGGCTTGC GCTCAACAAAAAAAGTATGGATGACGATGAGGAAGGTGGAAAGGATCTGGACTTCGATTT GGATGATGAAATTGAAAAAGGTGATGACTGGGAGCACGAAGAAACATTCACTGACGACGA TGAGGCTGTGGATATAGACCCAGAGGAGCGGGCAGATTTAGCTCCTGAGATTCCCGCTCC TCCTGAAATTAAGCAGGATGATGAAGAGAATGAAGAAGAGGGTGGTCTGAGCAAGTCTGG CAAGGAGTTGAAAAAGCTTCTTGGGAAAGCTGCTGGACTTAATGAGTCAGATGCCGATGA GGATGACGAAGATGATGACCAGGAGGATGAGTCATCTCCAGTGCTTGCTCCAAAACAGAA GGATCAACCCAAAGATGAACCTGTAGATAACAGCCCCGCTAAACCAACACCATCAGGACA TGCTCGTGGCACACCTCCTGCATCCAAATCGAAGCAAAAGAGGAAATCAGGTGGTGGTGA TGATTCAAAAGCATCTGGCGGTGCAGCTTCCAAAAAAGCAAAGGATACAAAACCATCAGT GGCCAAAGATGAGACACCATCTTCCTCAAAACCTGCATCGAAGGCCACTGCTGCATCAAA AACTAGTGCAAATGTATCTCCTGTCACAGAGGATGAAATCAGGACTGTTCTTCTTGCTGT TGCTCCTGTCACTACACAAGATTTGGTATCTAGATTTAAGTCTAGACTACGAGGTCCAGA GGACAAGAATGCTTTTGCTGAAATTCTGAAGAAAATATCGAAGATTCAGAAGACTAATGG CCACAATTATGTCGTCCTTAGAGATGACAAGAAGTGAAGAGCAAAACTAAAGTGGTGCTT TCTTAAAATGCAACCTTTTGCTTTGCTGTGCCTTTTGGCATAACATGTTTGTAAGATAAG TGTATTGGAAGAATTGGCCTTGTAACCTGATGTATTTAGGGCCTATTTGGATTGTTACCC TACCAATTTTTTGGTAGTGCCAAAATGTAGGCAAGTTTTGGCACTACCAAATCTTTGGTA AAGTAAGATTGCATTGATCATATTTGGTTTGCTACCAATATATAGCTAAAATGTAAAATT GTAGTGAAG