Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0183000-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:5694345:5697886:-1 gene:Os10g0183000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Low seed setting related description:NB-LRR protein, Immune response (Os10t0183000-01);NB-ARC domain containing protein. (Os10t0183000-02)
Sequence	ATGACAGCATCAGTAGTTTCCTCAGTTTTGCAGAGGCTTGGTGACCTTGTCATCCAAGAA GCTACCTTTTTAAGTGATGTTCCTCGACAAGTATCATCCATGAAAGCAGAACTGAGCCAG ATGCAATGCTTCTTAAATGTTGTGGATGCCAAATGTTTGGAAGGAAACAGCATGATGAAA AATCTGGCCAGTAATATTCAAGACGTGGCATACCGGGTGGAAGAGGTTATTGACAATGCT CATTTCATTTTTAGGAGGAGAAAGACTTCTGTATCAAAATATACTCACATCTTTGGTGAT TCCATTGACCTCCGTGAGGTTGGCAAAAACATACAAGTTATAAGAAAGGAAATTAGTGAG ATTTTTGAGCGGTACAACAGATACAACGCAGTTAATTCTAGCACTTCAACGGAAGCACAG CCCATTTTTAGGGAGGATGAGGATTTCTATGCACAAAGGCTTGTGCCGCCGGGTTTGGAT CAAGGAATGGATATAGTTGGATTCGATCATGAAATTGCACAAATTAAGAGTTACTTGCTT GACCAAAATAACATGAATCTAACTGTTATATCGATTGTTGGTCAGGCAGGGGCTGGGAAG TCCACACTTGCAAAACTAGCTTATAGTTCAGTCATAACTGAAGGTTATTTTCACAAATAT GGTTGGGTATCCATTTCTCCAAAATATTCTGCCCTTGAAGTATTAAGAGATCTCGTGCGA CAGATAAGGGGCACTGGGAAGATAAGCGAGCGAAAGAGCATGCATTTAAATTTCTATGGT GAGACAGAGGTTTCAAAACTTATTTTTGATTTTCTGAAGGAAGAGCGCTACCTTATTGTT TTGGATGACATCTGGACAACAGATACCTGGGACAAGATCAAATCAGTATTTCCTGACAAA GGAAATGGAAGTAGAATAATTCTGACTACCCGTGATATGGAAGTTGGACAACATCCTAAA ACTAAAGTGCAAATTCATACCCCTGACCTATTAGACGAAGACAAGAGCTGGGAACTTTTC CAGAAGAAGGCATTTCCACATGATGTGCAATTCACAGAACTTGAGGTGGTGGGGAAAAAA CTCTCCAAGAAATGCAATGGCTTGCCACTTGCTCTAGTGGTTTTAGGTTGCTTCCTTTCA CGAAACCACAATATTCATACATGGGAGAAAATGGTTGCTAGTGTAGACTGGGAAATCATG AAAAAGGAGGGCGATGTTGGACGTATATTAGCTCTAAGTTATCACAATATGTCAAATAAC CTTAAAGCTTGCTTCCTTTATACTGCATCCTTTCCCGAGGACTACCCTATCACAGTTCAT GTTCTTAAAAAGATGTGGATTGCTGAGGGATTTGTCCCAAATATAAGAGGATATACACAA GAAGAAGTTGCCTACAGATATGTAGAAGAGCTGGCACAGAGATGTATGATCCAAATTGAA GAAAGAAGTAAAAACATTGGGTGGATAAAGAAAATAAAAGTTCATGATGTGTTGCGTGAG TGGGGAATTGGACAAGCCAGGAAGGAAGGTTTCTTGAAAGTTTGCTCAAGCGGCACAGAT GTGGAGACTTATTATGCAGATGAACAGAGGTGTTACCGTGTAGCATTTCATGGTTACTTT GATAATGAAGTGGGAAAATCAGTTCTGAATCTCCGTTCTGTGCTGGCCTTCAACCCTGAT GGCAAACGTCTGTTTTCTTTCAATGGGTTGCATTTGTTGAGGGTGCTTCATTTTTGCAGT TCCTTAAAGACATGTACCTTGCCTGAAGAAATAAACAAATTGGTACATCTGAGATACCTG GGTTTGGAAGGTAGTACTGTTTTCATGTTCCCTTCTTATATGAAAGGTCTTAGAAACTTG CAAATTCTTGAAGCAAGTACAGCTACTGTCAAGGCACTTCCAAGTTCCCTCTGGAGCATC GCAGCACTAAAGCATGTTCATGTCTACCAAGTACTGCATTGGAAAGCCCAGGAGATTAGA ACGAAACGAAGCTTGCAGACTCTTTATGTATTTTCCATAATGCAGTGTGATGCTCTGACG TGGAAAAGAACAATCAGGTCTCTGCAAAAAATGAGCCAACATGTTTCCTGGTGCTTAGGG ATAGCCTCTACTAAACGCGTGAAGGAAAAAGAGACCCAAGAACATGAAGAATACAATTTA GATATAAGGGTAGATGCCTTAGAATCCAAAGTTGATGGTTTAGAATTGTCTGGATGTTTT AAAGAGCGTCACGTTCTGAATGATGTGCTTCCACATCATAATCTATTCCCAAACTTTCTA TTGCAGCTCAAGATATCTTGTCCCAATATACTAAATGATGATCCAATGCCAATTCTGGAG AGACTTCCACGTCTTGAAGTGCTTGAAATTGTTAACTCATCATACACAGGAAAGAGAATA ACATGTTCTTCCGAGGGATTCCTTGCATTACGCAGTTTGGTACTTATGGATATTGGTTTG GAGGAGTGGAATTTGCAGCAGGGATCCATGGCGTTTCTCGCTGTTTTGACTCTCAAGTGT ACCATGCTGAGGAGCATCTCAAATGTACTTCACCAGCTGGATGATTTGGTAGAGCTTCGC TTGATTTGCATGCCTCAGCTCTCTGTTGATGATCATGAGCCAGCTAGGGGGAGGGGATGC CGTGTCATGATTTCAGTTGACGAGGAACAAACTTCTGATACTTGA

Peptide Sequence

PEP ID	Os10t0183000-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:5694345:5697886:-1 gene:Os10g0183000 transcript:Os10t0183000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Low seed setting related description:NB-LRR protein, Immune response (Os10t0183000-01);NB-ARC domain containing protein. (Os10t0183000-02)
Sequence	MTASVVSSVLQRLGDLVIQEATFLSDVPRQVSSMKAELSQMQCFLNVVDAKCLEGNSMMK NLASNIQDVAYRVEEVIDNAHFIFRRRKTSVSKYTHIFGDSIDLREVGKNIQVIRKEISE IFERYNRYNAVNSSTSTEAQPIFREDEDFYAQRLVPPGLDQGMDIVGFDHEIAQIKSYLL DQNNMNLTVISIVGQAGAGKSTLAKLAYSSVITEGYFHKYGWVSISPKYSALEVLRDLVR QIRGTGKISERKSMHLNFYGETEVSKLIFDFLKEERYLIVLDDIWTTDTWDKIKSVFPDK GNGSRIILTTRDMEVGQHPKTKVQIHTPDLLDEDKSWELFQKKAFPHDVQFTELEVVGKK LSKKCNGLPLALVVLGCFLSRNHNIHTWEKMVASVDWEIMKKEGDVGRILALSYHNMSNN LKACFLYTASFPEDYPITVHVLKKMWIAEGFVPNIRGYTQEEVAYRYVEELAQRCMIQIE ERSKNIGWIKKIKVHDVLREWGIGQARKEGFLKVCSSGTDVETYYADEQRCYRVAFHGYF DNEVGKSVLNLRSVLAFNPDGKRLFSFNGLHLLRVLHFCSSLKTCTLPEEINKLVHLRYL GLEGSTVFMFPSYMKGLRNLQILEASTATVKALPSSLWSIAALKHVHVYQVLHWKAQEIR TKRSLQTLYVFSIMQCDALTWKRTIRSLQKMSQHVSWCLGIASTKRVKEKETQEHEEYNL DIRVDALESKVDGLELSGCFKERHVLNDVLPHHNLFPNFLLQLKISCPNILNDDPMPILE RLPRLEVLEIVNSSYTGKRITCSSEGFLALRSLVLMDIGLEEWNLQQGSMAFLAVLTLKC TMLRSISNVLHQLDDLVELRLICMPQLSVDDHEPARGRGCRVMISVDEEQTSDT

Transcript Sequence

Transcript ID	Os10t0183000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:5694345:5697886:-1 gene:Os10g0183000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Low seed setting related description:NB-LRR protein, Immune response (Os10t0183000-01);NB-ARC domain containing protein. (Os10t0183000-02)
Sequence	GACGACTGTAGCCCAGCTCCAGAACGAAGTCAATTTGGGGCTTTTCAGTTCCTCTCTCCA AATCGGTCCAATGTCTCTTCCCCCAGCCGCAATCCCCTCTCGCTCAACCATGGATATGAT ATCTATTGCCCTCTCATTAATGGATGTCAATAACATAAGGGGATCTCATCAAGTACTATT AAACAATAAGGACAGAACAGGATGATATTTACTGGCTATGCAACTTTCTCCATCTAAATT CATGGTGGATTCATTCAGCTAACTAAGCATGACAGCATCAGTAGTTTCCTCAGTTTTGCA GAGGCTTGGTGACCTTGTCATCCAAGAAGCTACCTTTTTAAGTGATGTTCCTCGACAAGT ATCATCCATGAAAGCAGAACTGAGCCAGATGCAATGCTTCTTAAATGTTGTGGATGCCAA ATGTTTGGAAGGAAACAGCATGATGAAAAATCTGGCCAGTAATATTCAAGACGTGGCATA CCGGGTGGAAGAGGTTATTGACAATGCTCATTTCATTTTTAGGAGGAGAAAGACTTCTGT ATCAAAATATACTCACATCTTTGGTGATTCCATTGACCTCCGTGAGGTTGGCAAAAACAT ACAAGTTATAAGAAAGGAAATTAGTGAGATTTTTGAGCGGTACAACAGATACAACGCAGT TAATTCTAGCACTTCAACGGAAGCACAGCCCATTTTTAGGGAGGATGAGGATTTCTATGC ACAAAGGCTTGTGCCGCCGGGTTTGGATCAAGGAATGGATATAGTTGGATTCGATCATGA AATTGCACAAATTAAGAGTTACTTGCTTGACCAAAATAACATGAATCTAACTGTTATATC GATTGTTGGTCAGGCAGGGGCTGGGAAGTCCACACTTGCAAAACTAGCTTATAGTTCAGT CATAACTGAAGGTTATTTTCACAAATATGGTTGGGTATCCATTTCTCCAAAATATTCTGC CCTTGAAGTATTAAGAGATCTCGTGCGACAGATAAGGGGCACTGGGAAGATAAGCGAGCG AAAGAGCATGCATTTAAATTTCTATGGTGAGACAGAGGTTTCAAAACTTATTTTTGATTT TCTGAAGGAAGAGCGCTACCTTATTGTTTTGGATGACATCTGGACAACAGATACCTGGGA CAAGATCAAATCAGTATTTCCTGACAAAGGAAATGGAAGTAGAATAATTCTGACTACCCG TGATATGGAAGTTGGACAACATCCTAAAACTAAAGTGCAAATTCATACCCCTGACCTATT AGACGAAGACAAGAGCTGGGAACTTTTCCAGAAGAAGGCATTTCCACATGATGTGCAATT CACAGAACTTGAGGTGGTGGGGAAAAAACTCTCCAAGAAATGCAATGGCTTGCCACTTGC TCTAGTGGTTTTAGGTTGCTTCCTTTCACGAAACCACAATATTCATACATGGGAGAAAAT GGTTGCTAGTGTAGACTGGGAAATCATGAAAAAGGAGGGCGATGTTGGACGTATATTAGC TCTAAGTTATCACAATATGTCAAATAACCTTAAAGCTTGCTTCCTTTATACTGCATCCTT TCCCGAGGACTACCCTATCACAGTTCATGTTCTTAAAAAGATGTGGATTGCTGAGGGATT TGTCCCAAATATAAGAGGATATACACAAGAAGAAGTTGCCTACAGATATGTAGAAGAGCT GGCACAGAGATGTATGATCCAAATTGAAGAAAGAAGTAAAAACATTGGGTGGATAAAGAA AATAAAAGTTCATGATGTGTTGCGTGAGTGGGGAATTGGACAAGCCAGGAAGGAAGGTTT CTTGAAAGTTTGCTCAAGCGGCACAGATGTGGAGACTTATTATGCAGATGAACAGAGGTG TTACCGTGTAGCATTTCATGGTTACTTTGATAATGAAGTGGGAAAATCAGTTCTGAATCT CCGTTCTGTGCTGGCCTTCAACCCTGATGGCAAACGTCTGTTTTCTTTCAATGGGTTGCA TTTGTTGAGGGTGCTTCATTTTTGCAGTTCCTTAAAGACATGTACCTTGCCTGAAGAAAT AAACAAATTGGTACATCTGAGATACCTGGGTTTGGAAGGTAGTACTGTTTTCATGTTCCC TTCTTATATGAAAGGTCTTAGAAACTTGCAAATTCTTGAAGCAAGTACAGCTACTGTCAA GGCACTTCCAAGTTCCCTCTGGAGCATCGCAGCACTAAAGCATGTTCATGTCTACCAAGT ACTGCATTGGAAAGCCCAGGAGATTAGAACGAAACGAAGCTTGCAGACTCTTTATGTATT TTCCATAATGCAGTGTGATGCTCTGACGTGGAAAAGAACAATCAGGTCTCTGCAAAAAAT GAGCCAACATGTTTCCTGGTGCTTAGGGATAGCCTCTACTAAACGCGTGAAGGAAAAAGA GACCCAAGAACATGAAGAATACAATTTAGATATAAGGGTAGATGCCTTAGAATCCAAAGT TGATGGTTTAGAATTGTCTGGATGTTTTAAAGAGCGTCACGTTCTGAATGATGTGCTTCC ACATCATAATCTATTCCCAAACTTTCTATTGCAGCTCAAGATATCTTGTCCCAATATACT AAATGATGATCCAATGCCAATTCTGGAGAGACTTCCACGTCTTGAAGTGCTTGAAATTGT TAACTCATCATACACAGGAAAGAGAATAACATGTTCTTCCGAGGGATTCCTTGCATTACG CAGTTTGGTACTTATGGATATTGGTTTGGAGGAGTGGAATTTGCAGCAGGGATCCATGGC GTTTCTCGCTGTTTTGACTCTCAAGTGTACCATGCTGAGGAGCATCTCAAATGTACTTCA CCAGCTGGATGATTTGGTAGAGCTTCGCTTGATTTGCATGCCTCAGCTCTCTGTTGATGA TCATGAGCCAGCTAGGGGGAGGGGATGCCGTGTCATGATTTCAGTTGACGAGGAACAAAC TTCTGATACTTGAATTTGTAAGTGACCCCATGCTTGAACTAACTTCATTGCCATGCCTCT CTAGTTTCAGCTACAAGAAAGCTTATATTCTTTCCCCATTTTGGATAAATTGCAATTTTG TT