Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0182000-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:5632466:5643047:1 gene:Os10g0182000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS). (Os10t0182000-01)
Sequence	ATGCTCGTGGTACGCCGCGCGTGCTGCCTCCTCCGGCTCTCCTCCTCCTCCCACCCGCCC GCGACTAGGGTTTTGCCCGCCGCCATCTACCTCACCTCCTCCTCCTCCGCCGCCGCATCC GCCCCCGCGCCACCGGCGATGGCGGCCTCGACGGAGTGGCCGGCGAGCCGAGTGCGGGAG ACCTTCATCTCCTTCTTCGAGTCCAAGTCCCACACGCGGTGGCCGTCCAGCCCCGTCGTC CCCGTCGACGACCCCACGCTGCTGTTCGCCAACGCCGGGATGAACCAGTTCAAGCCGGTC TTCCTCGGCACCGCCGCCCCGGACGCGCCGCTGGGCCGCCTCCGCCGCGCCTGCAACACC CAGAAGTGCATCCGCGCCGGGGGGAAGCACAACGACCTCGACGACGTCGGGAAGGACACC TACCACCACACCTTCTTCGAGATGCTCGGGAACTGGTCCTTCGGGGACTACTTCAAGGAG GAGGCCATCGGATTTGCCTGGGAGCTCCTCACCCAGGTGTACAAATTGCCTACCGATAGA ATTTATGCGACTTACTTTGGTGGTGATGAGAAATTTGGACTTGCTCCTGATACGGAGTCG AAGAACATATGGTTGAAATACCTACCCAAAGAAAAAGTTCTACCTTTCGGTTGCAAGGAT AATTTCTGGGAGATGGGTGATACTGGTCCTTGTGGGCCATGTACTGAAATTCATTTTGAT CGTGTTGGCAACCGTGATGCTGCTTCCCTAGTGAACAATGATGACCCCACTTGTATTGAG ATATGGAATCTTGTGTTCATTCAGTTCAATAGGGAAGCAGATTGTACTCTGAGACCTTTA CCAGCAAAACATGTTGACACAGGAATGGGATTTGAACGCTTAACTTCTATCCTTCAGAAT AAAATGAGCAATTATGACACAGATGTATTCATGCCAATATTTGATGCCATCCACCAATTG GCTGGCAATGGAATTCAATCATACTCGGGTAAAGTAGGTCCTGAAGATGTTGACAAAGTT GATATGGCTTACAGAGTAGTTGCAGATCACATAAGAACCCTTTCGTTTGCTATTGCTGAT GGTTCTCAACCTGGAAATGAGGGCAGAGAATATGTTCTGAGGCGTATTCTTAGGCGCGCT GTTCACTTTGGTCATCAAAAGTTGAAAGCAAAGCAAGGATTTTTTAGCTCTCTTGTACAT GTATTTGTCCAACTGATGGGAGATGTATTCCCTGAGCTGAAGGACAATGAAAAGAAGATC AAAGATATAATTAAAGATGAAGAGGAAAGCTTTGAGAACACTCTAGCAAAGGGTTTTGAA AAATTTAAGAAAGCGGCAGATGCTGTTAAAGAGAGTGGAGGAACAGTACTTAGTGGACAG GATGCATTTGTCCTGTGGGACACCTATGGCTATCCAGTTGACCTGACTGAGGTCATGGGA GTTGACTATGGCTTGAGTGTGGATCGGGAGGGTTTTGATGCTGCAATGGAAGAAGCGAGG CAGAAGGCTAGGAATGCACGCTTCAAGGCTGGGGAAAATTCCATTGTCTTGGATGCCAAT GCTACAGCACAGCTGCGCAACCAAGGGCTTGCTAGTACAGATGATAGCCCGAAGTATGGT TATAAGGACAATGACAGTGTGGTGAAGGCTATCTACACTGGTTCAGAATATGTAAGTGCC GCATCTGGCGATGAGGACTTTGGCCTTGTCCTGGAAAGTACAAGCTTCTACGCTGAACAG GGTGGTCAGATATATGACACTGGGAAAATTGAAGGGTCTTTCGGATCTTTCAATGTAACT AATGTTCAAGTATTTGCTGGGTATGTGCTGCATATGGGCTCATTTACAAAAGGTTCCAAG GCATTGTCTGTTGGTGATAAAGTGGCATGCAAGGTTGATTATGCTCGCCGTGCTCTCATT GCTCCAAACCATACATGTACCCATATGCTGAACTTTGCTCTACGGGAAATACTTGGTGAT CATGTTGACCAGAAAGGTTCAATTGTTCTCCCAGAGAAGCTACGGTTTGATTTCTCCCAT GGGAAACCTGTTCAGCCAGAAGATTTGCGGAAAATTGAGTCTATAGTGAATCAACAGATA AAAGACAAACTGGAAGTATTTGCACGTGAAATAAAATTAGCAGATGCGAAGCGCATAAAT GGTCTACGAGCTGTGTTTGGTGAAATCTATCCTGATCCGGTAAGAGTTGTATCAGTTGGT CGCAAAGTGGAAGATCTACTTGCCAATCCTGAAAGCAAAGAATGGCTATCCATTTCAACA GAGCTGTGTGGCGGTACACACATTAAAAACACTAGCGAGGCAGAAGCATTTGCCCTGTTG TCCGAGGAGGGTATTGCTAAAGGTGTTAGGAGGATCACAGCTGTTACTGCTAAACATGCC TCTGATGCTATAAAGGATGCATCATCTATTGATTCTGAAATCAATGAAGCATCAAAATTG GAGGGAGCTATATTGGAAAAGACGATTGCTTCCATCAAGAGCAAGCTTGATACAGCTTTA ATTCCAGCTGCAAGAAAAGCTGATCTTAAAGGCCGGGTGTCGAAGTTGGAGGATGAACTT AGGAAGGCCAAGAAGAAAATGGGCGAGGAGAACATCCAGAAGGCCGTGAAGTTTGCAATA GATGCCGCCCAAACTGCTCTTTCTGAAGGAAAGCGCTTCTGTGTTGCTCATGTAGATGTG GGTCTTGACACAAGTGCTATTCGGGAAGCAGTTATCAAAGTCAAGGACCAGAAGGATTTG CCAATCATGCTATTCAGCACGGATGAAGCCACGAATAAGGCAGTCATTTATGCTGGTGTG CCTCCCAGCGCTGCTAACAGCTTGAAGGTGTTGGATTGGTTGACACCATCGATTGCGCCC CTCAAAGGAAAGGGAGGTGGTGGCAAGAATGGAATTGCCCAGGGCCAGGGAACTGAGGCC TCTCAACTAAAGGAAGCTATGGAGGTTGCTACCCAGATAGCTTCAATGAAGCTGGTCTAA

Peptide Sequence

PEP ID	Os10t0182000-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:5632466:5643047:1 gene:Os10g0182000 transcript:Os10t0182000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS). (Os10t0182000-01)
Sequence	MLVVRRACCLLRLSSSSHPPATRVLPAAIYLTSSSSAAASAPAPPAMAASTEWPASRVRE TFISFFESKSHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDAPLGRLRRACNT QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGFAWELLTQVYKLPTDR IYATYFGGDEKFGLAPDTESKNIWLKYLPKEKVLPFGCKDNFWEMGDTGPCGPCTEIHFD RVGNRDAASLVNNDDPTCIEIWNLVFIQFNREADCTLRPLPAKHVDTGMGFERLTSILQN KMSNYDTDVFMPIFDAIHQLAGNGIQSYSGKVGPEDVDKVDMAYRVVADHIRTLSFAIAD GSQPGNEGREYVLRRILRRAVHFGHQKLKAKQGFFSSLVHVFVQLMGDVFPELKDNEKKI KDIIKDEEESFENTLAKGFEKFKKAADAVKESGGTVLSGQDAFVLWDTYGYPVDLTEVMG VDYGLSVDREGFDAAMEEARQKARNARFKAGENSIVLDANATAQLRNQGLASTDDSPKYG YKDNDSVVKAIYTGSEYVSAASGDEDFGLVLESTSFYAEQGGQIYDTGKIEGSFGSFNVT NVQVFAGYVLHMGSFTKGSKALSVGDKVACKVDYARRALIAPNHTCTHMLNFALREILGD HVDQKGSIVLPEKLRFDFSHGKPVQPEDLRKIESIVNQQIKDKLEVFAREIKLADAKRIN GLRAVFGEIYPDPVRVVSVGRKVEDLLANPESKEWLSISTELCGGTHIKNTSEAEAFALL SEEGIAKGVRRITAVTAKHASDAIKDASSIDSEINEASKLEGAILEKTIASIKSKLDTAL IPAARKADLKGRVSKLEDELRKAKKKMGEENIQKAVKFAIDAAQTALSEGKRFCVAHVDV GLDTSAIREAVIKVKDQKDLPIMLFSTDEATNKAVIYAGVPPSAANSLKVLDWLTPSIAP LKGKGGGGKNGIAQGQGTEASQLKEAMEVATQIASMKLV

Transcript Sequence

Transcript ID	Os10t0182000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:5632466:5643047:1 gene:Os10g0182000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7) (Alanine--tRNA ligase) (AlaRS). (Os10t0182000-01)
Sequence	AAGTCACATGCTCGTGGTACGCCGCGCGTGCTGCCTCCTCCGGCTCTCCTCCTCCTCCCA CCCGCCCGCGACTAGGGTTTTGCCCGCCGCCATCTACCTCACCTCCTCCTCCTCCGCCGC CGCATCCGCCCCCGCGCCACCGGCGATGGCGGCCTCGACGGAGTGGCCGGCGAGCCGAGT GCGGGAGACCTTCATCTCCTTCTTCGAGTCCAAGTCCCACACGCGGTGGCCGTCCAGCCC CGTCGTCCCCGTCGACGACCCCACGCTGCTGTTCGCCAACGCCGGGATGAACCAGTTCAA GCCGGTCTTCCTCGGCACCGCCGCCCCGGACGCGCCGCTGGGCCGCCTCCGCCGCGCCTG CAACACCCAGAAGTGCATCCGCGCCGGGGGGAAGCACAACGACCTCGACGACGTCGGGAA GGACACCTACCACCACACCTTCTTCGAGATGCTCGGGAACTGGTCCTTCGGGGACTACTT CAAGGAGGAGGCCATCGGATTTGCCTGGGAGCTCCTCACCCAGGTGTACAAATTGCCTAC CGATAGAATTTATGCGACTTACTTTGGTGGTGATGAGAAATTTGGACTTGCTCCTGATAC GGAGTCGAAGAACATATGGTTGAAATACCTACCCAAAGAAAAAGTTCTACCTTTCGGTTG CAAGGATAATTTCTGGGAGATGGGTGATACTGGTCCTTGTGGGCCATGTACTGAAATTCA TTTTGATCGTGTTGGCAACCGTGATGCTGCTTCCCTAGTGAACAATGATGACCCCACTTG TATTGAGATATGGAATCTTGTGTTCATTCAGTTCAATAGGGAAGCAGATTGTACTCTGAG ACCTTTACCAGCAAAACATGTTGACACAGGAATGGGATTTGAACGCTTAACTTCTATCCT TCAGAATAAAATGAGCAATTATGACACAGATGTATTCATGCCAATATTTGATGCCATCCA CCAATTGGCTGGCAATGGAATTCAATCATACTCGGGTAAAGTAGGTCCTGAAGATGTTGA CAAAGTTGATATGGCTTACAGAGTAGTTGCAGATCACATAAGAACCCTTTCGTTTGCTAT TGCTGATGGTTCTCAACCTGGAAATGAGGGCAGAGAATATGTTCTGAGGCGTATTCTTAG GCGCGCTGTTCACTTTGGTCATCAAAAGTTGAAAGCAAAGCAAGGATTTTTTAGCTCTCT TGTACATGTATTTGTCCAACTGATGGGAGATGTATTCCCTGAGCTGAAGGACAATGAAAA GAAGATCAAAGATATAATTAAAGATGAAGAGGAAAGCTTTGAGAACACTCTAGCAAAGGG TTTTGAAAAATTTAAGAAAGCGGCAGATGCTGTTAAAGAGAGTGGAGGAACAGTACTTAG TGGACAGGATGCATTTGTCCTGTGGGACACCTATGGCTATCCAGTTGACCTGACTGAGGT CATGGGAGTTGACTATGGCTTGAGTGTGGATCGGGAGGGTTTTGATGCTGCAATGGAAGA AGCGAGGCAGAAGGCTAGGAATGCACGCTTCAAGGCTGGGGAAAATTCCATTGTCTTGGA TGCCAATGCTACAGCACAGCTGCGCAACCAAGGGCTTGCTAGTACAGATGATAGCCCGAA GTATGGTTATAAGGACAATGACAGTGTGGTGAAGGCTATCTACACTGGTTCAGAATATGT AAGTGCCGCATCTGGCGATGAGGACTTTGGCCTTGTCCTGGAAAGTACAAGCTTCTACGC TGAACAGGGTGGTCAGATATATGACACTGGGAAAATTGAAGGGTCTTTCGGATCTTTCAA TGTAACTAATGTTCAAGTATTTGCTGGGTATGTGCTGCATATGGGCTCATTTACAAAAGG TTCCAAGGCATTGTCTGTTGGTGATAAAGTGGCATGCAAGGTTGATTATGCTCGCCGTGC TCTCATTGCTCCAAACCATACATGTACCCATATGCTGAACTTTGCTCTACGGGAAATACT TGGTGATCATGTTGACCAGAAAGGTTCAATTGTTCTCCCAGAGAAGCTACGGTTTGATTT CTCCCATGGGAAACCTGTTCAGCCAGAAGATTTGCGGAAAATTGAGTCTATAGTGAATCA ACAGATAAAAGACAAACTGGAAGTATTTGCACGTGAAATAAAATTAGCAGATGCGAAGCG CATAAATGGTCTACGAGCTGTGTTTGGTGAAATCTATCCTGATCCGGTAAGAGTTGTATC AGTTGGTCGCAAAGTGGAAGATCTACTTGCCAATCCTGAAAGCAAAGAATGGCTATCCAT TTCAACAGAGCTGTGTGGCGGTACACACATTAAAAACACTAGCGAGGCAGAAGCATTTGC CCTGTTGTCCGAGGAGGGTATTGCTAAAGGTGTTAGGAGGATCACAGCTGTTACTGCTAA ACATGCCTCTGATGCTATAAAGGATGCATCATCTATTGATTCTGAAATCAATGAAGCATC AAAATTGGAGGGAGCTATATTGGAAAAGACGATTGCTTCCATCAAGAGCAAGCTTGATAC AGCTTTAATTCCAGCTGCAAGAAAAGCTGATCTTAAAGGCCGGGTGTCGAAGTTGGAGGA TGAACTTAGGAAGGCCAAGAAGAAAATGGGCGAGGAGAACATCCAGAAGGCCGTGAAGTT TGCAATAGATGCCGCCCAAACTGCTCTTTCTGAAGGAAAGCGCTTCTGTGTTGCTCATGT AGATGTGGGTCTTGACACAAGTGCTATTCGGGAAGCAGTTATCAAAGTCAAGGACCAGAA GGATTTGCCAATCATGCTATTCAGCACGGATGAAGCCACGAATAAGGCAGTCATTTATGC TGGTGTGCCTCCCAGCGCTGCTAACAGCTTGAAGGTGTTGGATTGGTTGACACCATCGAT TGCGCCCCTCAAAGGAAAGGGAGGTGGTGGCAAGAATGGAATTGCCCAGGGCCAGGGAAC TGAGGCCTCTCAACTAAAGGAAGCTATGGAGGTTGCTACCCAGATAGCTTCAATGAAGCT GGTCTAACTTTTGGATACCTAGTTTCCATCTGTTCTTTTTTTTTTCCTATTGATGCTTCT TTGTAACAATTTCGCTCCTTACAGAAGTTTTATATCATGTCGAAACGTGAAAGCAAAAAA GGTTGATTGATGTTACCAAATACCGATACGCTTCTGTACGGGCCACATTTAATCGTATTG GTTTATCAAAATGGCAAATTTAACTTGTTATT