Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0180000-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:5487011:5490446:-1 gene:Os10g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glucuronyltransferase 1 description:NpGUT1 homolog. (Os10t0180000-01);Similar to secondary cell wall-related glycosyltransferase family 47. (Os10t0180000-02)
Sequence

ATGGGGACGAGGAGGAGGAGTGCGCGAGCGCGAGCGCGGCCGCCGCTGGCCATGCCGCTC
GCCGTGCTTCTTCTCTTCGCCTGTTCTTCCGGCGTCGCAGCCGCGGCCGCTCAGGGCATC
GAGCGGATCAAAGACGATCCTGTTGGAAAGCTGAAGGTGTATGTCTACGAGCTGCCCCCC
AAGTACAACAAGAACATTGTGGCGAAAGATTCCAGATGCCTCAGCCACATGTTTGCCACA
GAGATCTTCATGCATCGCTTCCTGCTGTCGAGTGCGATCCGGACTTCGAATCCGGACGAA
GCCGATTGGTTCTACACTCCAGTGTACACCACATGCGACCTCACGCCATGGGGCCATCCC
CTGACCACCAAGTCTCCACGCATGATGAGAAGTGCGATCAAGTTCATCTCCAAGTACTGG
CCCTACTGGAACAGAACGGAGGGTGCGGATCATTTCTTCGTTGTGCCACATGACTTTGCA
GCGTGCTTCTACTTCCAGGAGGCGAAGGCTATTGAGCGAGGCATCCTTCCGGTGCTGCGC
CGTGCTACGCTGGTGCAGACGTTTGGGCAGAAGAACCATGCGTGTCTCAAGGATGGCTCC
ATCACAGTCCCGCCGTATACTCCTGCTCACAAGATCAGAGCTCATCTTGTTCCACCAGAG
ACTCCTCGGTCAATCTTTGTCTACTTCCGTGGTTTGTTCTATGATACTTCGAATGATCCT
GAGGGTGGTTACTATGCAAGGGGCGCCCGTGCATCGGTGTGGGAGAACTTCAAGAACAAC
CCGATGTTCGACATCTCTACGGACCACCCCCAAACCTACTACGAGGACATGCAGCGTGCA
GTCTTCTGCCTGTGCCCGCTGGGCTGGGCGCCATGGAGCCCTCGTCTGGTGGAGGCCGTG
GTGTTCGGCTGCATCCCGGTGATCATCGCAGACGACATCGTCCTCCCCTTCTCCGACGCG
ATCCCGTGGGAGGAGATCGCCGTGTTCGTGGCCGAGGACGATGTCCCGCAGCTGGACACC
ATCCTGACCTCCATACCAACGGAGGTGATCCTCCGGAAGCAGGCGATGCTCGCGGAGCCG
TCGATGAAGCAGACCATGCTGTTCCCGCAGCCTGCGGAGCCCGGGGATGGCTTCCACCAG
GTGATGAACGCGCTGGCGAGGAAGCTGCCCCATGGCAGGGATGTGTTCCTCAAGCCCGGG
CAGAAGGTGCTCAACTGGACCGAGGGGACCCGGGAAGACCTGAAGCCGTGGTAG

Peptide Sequence

PEP ID

Os10t0180000-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:5487011:5490446:-1 gene:Os10g0180000 transcript:Os10t0180000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glucuronyltransferase 1 description:NpGUT1 homolog. (Os10t0180000-01);Similar to secondary cell wall-related glycosyltransferase family 47. (Os10t0180000-02)
Sequence

MGTRRRSARARARPPLAMPLAVLLLFACSSGVAAAAAQGIERIKDDPVGKLKVYVYELPP
KYNKNIVAKDSRCLSHMFATEIFMHRFLLSSAIRTSNPDEADWFYTPVYTTCDLTPWGHP
LTTKSPRMMRSAIKFISKYWPYWNRTEGADHFFVVPHDFAACFYFQEAKAIERGILPVLR
RATLVQTFGQKNHACLKDGSITVPPYTPAHKIRAHLVPPETPRSIFVYFRGLFYDTSNDP
EGGYYARGARASVWENFKNNPMFDISTDHPQTYYEDMQRAVFCLCPLGWAPWSPRLVEAV
VFGCIPVIIADDIVLPFSDAIPWEEIAVFVAEDDVPQLDTILTSIPTEVILRKQAMLAEP
SMKQTMLFPQPAEPGDGFHQVMNALARKLPHGRDVFLKPGQKVLNWTEGTREDLKPW

Transcript Sequence

Transcript ID

Os10t0180000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:5487011:5490446:-1 gene:Os10g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:glucuronyltransferase 1 description:NpGUT1 homolog. (Os10t0180000-01);Similar to secondary cell wall-related glycosyltransferase family 47. (Os10t0180000-02)
Sequence

ATTCTGAATTCTCCCATGCCTTCTCCTGGTAAAGAATAATCCCACCACCTCCCTCCTCTA
CTACCTCTCCCTCCCCCCAAACTCGAGCCTCCATCTCCCTCCCCGATCCAGACACCGATC
GAGGCGTTGACGACGACGTCTAGCTCATGGGGACGAGGAGGAGGAGTGCGCGAGCGCGAG
CGCGGCCGCCGCTGGCCATGCCGCTCGCCGTGCTTCTTCTCTTCGCCTGTTCTTCCGGCG
TCGCAGCCGCGGCCGCTCAGGGCATCGAGCGGATCAAAGACGATCCTGTTGGAAAGCTGA
AGGTGTATGTCTACGAGCTGCCCCCCAAGTACAACAAGAACATTGTGGCGAAAGATTCCA
GATGCCTCAGCCACATGTTTGCCACAGAGATCTTCATGCATCGCTTCCTGCTGTCGAGTG
CGATCCGGACTTCGAATCCGGACGAAGCCGATTGGTTCTACACTCCAGTGTACACCACAT
GCGACCTCACGCCATGGGGCCATCCCCTGACCACCAAGTCTCCACGCATGATGAGAAGTG
CGATCAAGTTCATCTCCAAGTACTGGCCCTACTGGAACAGAACGGAGGGTGCGGATCATT
TCTTCGTTGTGCCACATGACTTTGCAGCGTGCTTCTACTTCCAGGAGGCGAAGGCTATTG
AGCGAGGCATCCTTCCGGTGCTGCGCCGTGCTACGCTGGTGCAGACGTTTGGGCAGAAGA
ACCATGCGTGTCTCAAGGATGGCTCCATCACAGTCCCGCCGTATACTCCTGCTCACAAGA
TCAGAGCTCATCTTGTTCCACCAGAGACTCCTCGGTCAATCTTTGTCTACTTCCGTGGTT
TGTTCTATGATACTTCGAATGATCCTGAGGGTGGTTACTATGCAAGGGGCGCCCGTGCAT
CGGTGTGGGAGAACTTCAAGAACAACCCGATGTTCGACATCTCTACGGACCACCCCCAAA
CCTACTACGAGGACATGCAGCGTGCAGTCTTCTGCCTGTGCCCGCTGGGCTGGGCGCCAT
GGAGCCCTCGTCTGGTGGAGGCCGTGGTGTTCGGCTGCATCCCGGTGATCATCGCAGACG
ACATCGTCCTCCCCTTCTCCGACGCGATCCCGTGGGAGGAGATCGCCGTGTTCGTGGCCG
AGGACGATGTCCCGCAGCTGGACACCATCCTGACCTCCATACCAACGGAGGTGATCCTCC
GGAAGCAGGCGATGCTCGCGGAGCCGTCGATGAAGCAGACCATGCTGTTCCCGCAGCCTG
CGGAGCCCGGGGATGGCTTCCACCAGGTGATGAACGCGCTGGCGAGGAAGCTGCCCCATG
GCAGGGATGTGTTCCTCAAGCCCGGGCAGAAGGTGCTCAACTGGACCGAGGGGACCCGGG
AAGACCTGAAGCCGTGGTAGATAGATATATACAGTATATGATAGTGTTATGGCACCATTG
CCATTCACCATGGCTGGTGTTCTTGTGTAAATGACACCACCGGATGAGAAGCTGATCAAT
GAGGATATATTGATGATGATGAGCGAACCACACCATTGAATGTAAAGCTCCCTTTCCTTG
CTTCTTTTTAAGGCCATGTGCCTGTATGGCAATGTCTGTTTTGACCATTGTTGTAGTGTT
AGCGTATTACAGGTCATGGATTATGTAATACTAGTCAATAACCCATACGTTACACCGTGC
AACTTGCACAGGCTATTTGTTCATATATATATAAAACATAAATAGTAAAATTTTGTCATA
GGC