Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0177200-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:5325563:5329971:-1 gene:Os10g0177200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:drought stress response-1 description:EF-HAND 2 domain containing protein. (Os10t0177200-02)
Sequence	ATGGCGTCGGGCAAGATGGAGAACGGCCAGCAGCAGCAGCAGCAGGAGGTGAGGAGGAGG AGGAACGGCGAGGTGGTGGTGGACGGGTCGGAGATCCTGCAGCTGGTGGAGAACAAGGAG GCGTTTGGTAAGTTCGTGGAGCAGAAGTTCAGGCTGCTCGACGCCGACGGCGACGGGAGG CTGTCGGTGAGGGAGCTCCAGCCGGCCGTCGCTGACATCGGCGCCGCCATCGGGTTGCCG GCGAGGGGGTCGTCGGCGCAGGCCGACCACATCTACTCTGAGGTTCTTAACGAGTTCACA AAAGGGAAGAAAGAATCGGTGAGCAAGTCAGAGTTCCAGCGTGTCCTCTCTGACATACTT CTTGGCATGGCGGCTGGACTAAAGAGGGACCCCATTGTGATCTTGAGGATTAACGGTGAA GATTTGAATGAATTTGTTGAGAGCCCAAGGTACGAACCGGAGATGGCTGCCATATTTTCG CAAGTTGAATCAGGAAATTCAACCTTGCAGCAGTGCATGCTAGCTGCTATTCGACAACTG ACGGTCGACCACGGCATGCCACCGGCTTCAGATTCATGGGTTATGGAGAATATCATAGAA CCTGCATTGCAAGAACTCCATGGTGATAACCTGGAGCAACCTGTCACTCAAGAGGTCTTC TTCCAGGAATTCAGAAAGTTCTTGGCAATCCTCACGCAGCGACTCCAAGGGCACCCTGTG ATTGTAGCACATACCGAGAACACCTTTGATGGGAATGGTATCAAGAAGCTGCTGTCAAAC AAGCTCGAATTAGATAAGCTGTTGGATTGTGTTTGGAGAGGCGTACCGAAAGAAAAAGAT AGAACAGCGAAGCAGTACATTCGGGTTGCGTTCGATAGGATGGCTGACTCCATAAATCTA CCACCATATGGAGCTGTTGAACAGGTAGATGCTGTGGTCGATGAGGCGTTCAAGATGGCG AAAGCCGAGGACGGGAAGGCGGTGGATGAAACGGAGTTCAAGAAATTGCTCACTGAGATC CTTGGGGCAGTGATGCTGCAGCTAGATGGCAATCCAATATCGGTTTCGACCAACAGTGTA CTCCATGAGCCAATGTCCACTTCTTCCACCCTGCTTTCGCCATCGCCGCCGTCGCCAATG GTGTCATCACCGAGTGAATAG

Peptide Sequence

PEP ID	Os10t0177200-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:5325563:5329971:-1 gene:Os10g0177200 transcript:Os10t0177200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:drought stress response-1 description:EF-HAND 2 domain containing protein. (Os10t0177200-02)
Sequence	MASGKMENGQQQQQQEVRRRRNGEVVVDGSEILQLVENKEAFGKFVEQKFRLLDADGDGR LSVRELQPAVADIGAAIGLPARGSSAQADHIYSEVLNEFTKGKKESVSKSEFQRVLSDIL LGMAAGLKRDPIVILRINGEDLNEFVESPRYEPEMAAIFSQVESGNSTLQQCMLAAIRQL TVDHGMPPASDSWVMENIIEPALQELHGDNLEQPVTQEVFFQEFRKFLAILTQRLQGHPV IVAHTENTFDGNGIKKLLSNKLELDKLLDCVWRGVPKEKDRTAKQYIRVAFDRMADSINL PPYGAVEQVDAVVDEAFKMAKAEDGKAVDETEFKKLLTEILGAVMLQLDGNPISVSTNSV LHEPMSTSSTLLSPSPPSPMVSSPSE

Transcript Sequence

Transcript ID	Os10t0177200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:5325563:5329971:-1 gene:Os10g0177200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:drought stress response-1 description:EF-HAND 2 domain containing protein. (Os10t0177200-02)
Sequence	ACTTCAGCTGCAACGGAGAAATCGACGCAAAAACAAACCGCAGAAAGAAAGAAAAAAACA AGAAAGGTTGTGTTCACGGGGAGCTTGGTGCCATTGCTGCAAGTTGGGGAACTTTTTGGG TTGTAGAAAAGGAAGCTGATGGCGTCGGGCAAGATGGAGAACGGCCAGCAGCAGCAGCAG CAGGAGGTGAGGAGGAGGAGGAACGGCGAGGTGGTGGTGGACGGGTCGGAGATCCTGCAG CTGGTGGAGAACAAGGAGGCGTTTGGTAAGTTCGTGGAGCAGAAGTTCAGGCTGCTCGAC GCCGACGGCGACGGGAGGCTGTCGGTGAGGGAGCTCCAGCCGGCCGTCGCTGACATCGGC GCCGCCATCGGGTTGCCGGCGAGGGGGTCGTCGGCGCAGGCCGACCACATCTACTCTGAG GTTCTTAACGAGTTCACAAAAGGGAAGAAAGAATCGGTGAGCAAGTCAGAGTTCCAGCGT GTCCTCTCTGACATACTTCTTGGCATGGCGGCTGGACTAAAGAGGGACCCCATTGTGATC TTGAGGATTAACGGTGAAGATTTGAATGAATTTGTTGAGAGCCCAAGGTACGAACCGGAG ATGGCTGCCATATTTTCGCAAGTTGAATCAGGAAATTCAACCTTGCAGCAGTGCATGCTA GCTGCTATTCGACAACTGACGGTCGACCACGGCATGCCACCGGCTTCAGATTCATGGGTT ATGGAGAATATCATAGAACCTGCATTGCAAGAACTCCATGGTGATAACCTGGAGCAACCT GTCACTCAAGAGGTCTTCTTCCAGGAATTCAGAAAGTTCTTGGCAATCCTCACGCAGCGA CTCCAAGGGCACCCTGTGATTGTAGCACATACCGAGAACACCTTTGATGGGAATGGTATC AAGAAGCTGCTGTCAAACAAGCTCGAATTAGATAAGCTGTTGGATTGTGTTTGGAGAGGC GTACCGAAAGAAAAAGATAGAACAGCGAAGCAGTACATTCGGGTTGCGTTCGATAGGATG GCTGACTCCATAAATCTACCACCATATGGAGCTGTTGAACAGGTAGATGCTGTGGTCGAT GAGGCGTTCAAGATGGCGAAAGCCGAGGACGGGAAGGCGGTGGATGAAACGGAGTTCAAG AAATTGCTCACTGAGATCCTTGGGGCAGTGATGCTGCAGCTAGATGGCAATCCAATATCG GTTTCGACCAACAGTGTACTCCATGAGCCAATGTCCACTTCTTCCACCCTGCTTTCGCCA TCGCCGCCGTCGCCAATGGTGTCATCACCGAGTGAATAGAAGCAAGATGGAAGGAAGCTG ATCATAGAATGGACAGTGGAGAATATAATTTCCACTGGTGGTAACAGTAACTGCAATATA ATGCTGGTTTTCTTCTGATCAATGAACAAACTGCAGTAACTTGATAGTTGCCATGTAACT GGAGACCTGGTGCAAATATGTTTGTGTTGGTGTTTGTAACTACGTTCTAAGTGTTTAGTG TCGGAATAATAAGGCTTCTAATTAAGCCAGCAGTTGAACAACGGGGAATAATTTATTTCA AGCTTTTGTTTTGGGTGCAGCAGATGCTTGGAAATGGCAAGCTTGGGGACCAATAATGGT ATGATAAAACTATGTTAGTAACT