Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0170300-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:4835906:4842231:1 gene:Os10g0170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline-phosphatase-like, core domain domain containing protein. (Os10t0170300-01)
Sequence	ATGGCGGCGCCGGGGAGCCACACCCGCCGCCGCGCGTGGCCGCTGCTGTTCCTCGCCGTC CTCATGTTCCACTCGCTCGCCATCTACCTCTTCACCCGCGGCTTCCTCCTCACCCGCACC GAGCTCGACGTCCACAGCCACCGCGACGACCGCATCGGCATCTCCCCGGGCTGCTCCTCC TGGCCCCCGCCCGCCGTCGACCGCCTCGTCATCGTCGTCCTCGACGCCCTCAGGTTCGAT TTTGTGGCACCAAGTACATTCTTTCAAGAGAGGCAACCATGGATGGACAAACTGCAGGTT CTGCAAAGATTGGCTGCTGATGAGAAGACCTCTGCTAGGATATTCAAAGCGCTTGCTGAT CCACCGACGACTAGCCTTCAACGTCTTAAGGCTCTGACGACAGGTGGTCTGCCTACATTT ATTGATGTGGGAAATAGCTTTGGAGCTCCAGCAATAGTAGAAGACAACATAATGCATCAG TTTGCCAAAAATGGAAAGAGGGTCGTCATGATGGGAGACGATACTTGGATCCAGTTATAC CCTGAACATTTCAACAAGTCATATCCTTACCCTTCTTTTAACGTTAAAGATCTTGACACA GTAGACAATGGTGTTATTGAGCACTTGCTTCCATCATTACACAAAAATGATTGGGACGTT CTTATTGCACATTTCCTTGGCGTGGACCATGCAGGGCATATATTCGGTGTTGACTCTACC CCAATGATCCAGAAGTTGGAGCAATACAATCGGATCCTAGAGGATGTAATTGACACATTG AAAAGTCTATCAACATCGGGTGGTCCCCATGAGAATACTTTACTTCTTGTAATGGGGGAT CATGGCCAAACACTAAATGGTGATCATGGTGGAGGAACTGCTGAAGAGGTTGAAACATCG CTCTTTGCATGGAGTCCGAAGACCCCACCAAATGCTGTCTTGTCTGTTCTTGGTAAAAAT TTATGCAACGCTGATCTGCATGGTAAAGAGGTGTGCGTCAGCACTATGCAGCAGCTTGAT TTTGCAGTAACTATAGCAGCGCTACTTGGTATACCTTTTCCTTTTGGAAGCATTGGACGT GTAAACCCAGAATTGTATGCTCTGAGTGCTGGAACATGGGATAATCAACAGATCGGTGCC AATGATTGTACACAGCAGAATGATCTAGAAGCATGGATGCGGAGATATGCTGAAGCTCTC TGTATAAATTGTTGGCAGGTAAAGAGGTACATTGATCGATATTCTGCCACTTCTGTTATT GGATTTCGAGCAGAAGACCTGAACCATGTTGCAGATCTGTATTCAAAAGCTCAGGCAAAT TGGTCCTCTGTCCTGAGGTCTACATGTCCAGTGGAAACAAGCAGTCAGGATGAATTAAAG GAGTGCGCAAATAAGGAATGCACAAGTTCAGCTCTGCGGTTGCAAATTGATGCATACTCT GACTTCTTGGAGAGCTTTGCAAAGCTTGCTCGCTCTGCATGGACTGAGTTTGATTTATGG CTGATGGGCATTGGTCTTTCAGTTATGATACTGTCAGTTAGTACTCAGGCATGTATGCTT GTGAAGTTGAATATTGATCAAATTTCAGAAAAGGAAAGAGCAAGTTCAAGTTTCATTCCG AAAAATTTCTTTGCTTTTGCATTGGTTGCAATTCGGGCAGCAAGTTTCCTATCCAATAGC TATATATTGGCAGAAGGTAGAGTTGCAAACTTTCTTTTGGCCACGAGTTGCATTGCCAGT GTGTGGCACTCAGCCACAAAAGGAAAATTCATCATAGAAGAGTTTGTTTTTCTCCTCCTT AATATTTTCATACGATTTGGGATTGAGTTTGGGATGTCAAAACAAATTTCTGGGTCAATA ATTTCAAATGACCACCCAGTCAGCATTATTTGTGGCCTGTTTGGTTCAAGTTTTTGCAGT GATCTCATGGAAATATTCCCCATCATATCTCTTACCTTAGTGGCCTATATAATTTTGAAG TGCATATCCTATGCGATCAGTCATAGATTCTTGAAGTACTCTGTTATGTCTGGAAGCATC TTGAGTTATATATTTATAGCAATTCATTGGGCTTCTGAAAGTACTTTGCTCTCTCATACT AAAGCTACTAGAGAGACTGGAATAAGTTTAGCTCCTCGCCTTGTATACACTATTGGAGGT TTATCATTAGCAATATCTGCATTTTATCGGTTGTTTGGGTCAACTGATCATTTGAAGATG AATGAAAGGATAACTAGTTTGTCAGCTGTCATGCTGTGCTCCTGGAGTCCTACTATCTTG ATCTTGTTGGGAAGACAAGGTCCCTTTGTGGCTCTAATTTGTATGACTATAGCATGGTGT ATAATAAAGTTACAGCAGAAAAATCAGAGAGAGCTGAAACTTGACAAAGGAATACATGCT GCTGACTCTGTTTCAGTAACACAATGGAGCTTTCTGGCAGTTTGTCTATTTTATCTGACG GGTCATTGGTGTACCTTTGATGGCCTCCGTTATGGTGCTGCATTCATTGGGTTTGATCAT TTCCATATTATCCGACAAGGCCTTCTTCTTTCCATTGATACTTTTGGCGTTTCTCACATA CTGCCTGTTCTTAGTCTTCCGTTTATTGCCATATGCTGGTACAATTCTGCATCCAAGAAC AGCAAGGTGAATGATGCCACTGTCACCAGATTAATACAGGTGCTTTTGATGTATGGTTTA ATTACATCAATCACAACAACGCTTACAATCATTTGTGTTACCATTCAACGGCGTCACTTG ATGGTCTGGGGTTTATTTGCCCCAAAATACGTATTTGATGCTATCGGGCTTCTTCTGACC GACTTGTTAGTTGTTCTGGCATCTATCTATTACAGCTGA

Peptide Sequence

PEP ID	Os10t0170300-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:4835906:4842231:1 gene:Os10g0170300 transcript:Os10t0170300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline-phosphatase-like, core domain domain containing protein. (Os10t0170300-01)
Sequence	MAAPGSHTRRRAWPLLFLAVLMFHSLAIYLFTRGFLLTRTELDVHSHRDDRIGISPGCSS WPPPAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALAD PPTTSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLY PEHFNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDST PMIQKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVETS LFAWSPKTPPNAVLSVLGKNLCNADLHGKEVCVSTMQQLDFAVTIAALLGIPFPFGSIGR VNPELYALSAGTWDNQQIGANDCTQQNDLEAWMRRYAEALCINCWQVKRYIDRYSATSVI GFRAEDLNHVADLYSKAQANWSSVLRSTCPVETSSQDELKECANKECTSSALRLQIDAYS DFLESFAKLARSAWTEFDLWLMGIGLSVMILSVSTQACMLVKLNIDQISEKERASSSFIP KNFFAFALVAIRAASFLSNSYILAEGRVANFLLATSCIASVWHSATKGKFIIEEFVFLLL NIFIRFGIEFGMSKQISGSIISNDHPVSIICGLFGSSFCSDLMEIFPIISLTLVAYIILK CISYAISHRFLKYSVMSGSILSYIFIAIHWASESTLLSHTKATRETGISLAPRLVYTIGG LSLAISAFYRLFGSTDHLKMNERITSLSAVMLCSWSPTILILLGRQGPFVALICMTIAWC IIKLQQKNQRELKLDKGIHAADSVSVTQWSFLAVCLFYLTGHWCTFDGLRYGAAFIGFDH FHIIRQGLLLSIDTFGVSHILPVLSLPFIAICWYNSASKNSKVNDATVTRLIQVLLMYGL ITSITTTLTIICVTIQRRHLMVWGLFAPKYVFDAIGLLLTDLLVVLASIYYS

Transcript Sequence

Transcript ID	Os10t0170300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:4835906:4842231:1 gene:Os10g0170300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline-phosphatase-like, core domain domain containing protein. (Os10t0170300-01)
Sequence	GCCGCGGTTCGCTGACGGGATCCATGGCGGCGCCGGGGAGCCACACCCGCCGCCGCGCGT GGCCGCTGCTGTTCCTCGCCGTCCTCATGTTCCACTCGCTCGCCATCTACCTCTTCACCC GCGGCTTCCTCCTCACCCGCACCGAGCTCGACGTCCACAGCCACCGCGACGACCGCATCG GCATCTCCCCGGGCTGCTCCTCCTGGCCCCCGCCCGCCGTCGACCGCCTCGTCATCGTCG TCCTCGACGCCCTCAGGTTCGATTTTGTGGCACCAAGTACATTCTTTCAAGAGAGGCAAC CATGGATGGACAAACTGCAGGTTCTGCAAAGATTGGCTGCTGATGAGAAGACCTCTGCTA GGATATTCAAAGCGCTTGCTGATCCACCGACGACTAGCCTTCAACGTCTTAAGGCTCTGA CGACAGGTGGTCTGCCTACATTTATTGATGTGGGAAATAGCTTTGGAGCTCCAGCAATAG TAGAAGACAACATAATGCATCAGTTTGCCAAAAATGGAAAGAGGGTCGTCATGATGGGAG ACGATACTTGGATCCAGTTATACCCTGAACATTTCAACAAGTCATATCCTTACCCTTCTT TTAACGTTAAAGATCTTGACACAGTAGACAATGGTGTTATTGAGCACTTGCTTCCATCAT TACACAAAAATGATTGGGACGTTCTTATTGCACATTTCCTTGGCGTGGACCATGCAGGGC ATATATTCGGTGTTGACTCTACCCCAATGATCCAGAAGTTGGAGCAATACAATCGGATCC TAGAGGATGTAATTGACACATTGAAAAGTCTATCAACATCGGGTGGTCCCCATGAGAATA CTTTACTTCTTGTAATGGGGGATCATGGCCAAACACTAAATGGTGATCATGGTGGAGGAA CTGCTGAAGAGGTTGAAACATCGCTCTTTGCATGGAGTCCGAAGACCCCACCAAATGCTG TCTTGTCTGTTCTTGGTAAAAATTTATGCAACGCTGATCTGCATGGTAAAGAGGTGTGCG TCAGCACTATGCAGCAGCTTGATTTTGCAGTAACTATAGCAGCGCTACTTGGTATACCTT TTCCTTTTGGAAGCATTGGACGTGTAAACCCAGAATTGTATGCTCTGAGTGCTGGAACAT GGGATAATCAACAGATCGGTGCCAATGATTGTACACAGCAGAATGATCTAGAAGCATGGA TGCGGAGATATGCTGAAGCTCTCTGTATAAATTGTTGGCAGGTAAAGAGGTACATTGATC GATATTCTGCCACTTCTGTTATTGGATTTCGAGCAGAAGACCTGAACCATGTTGCAGATC TGTATTCAAAAGCTCAGGCAAATTGGTCCTCTGTCCTGAGGTCTACATGTCCAGTGGAAA CAAGCAGTCAGGATGAATTAAAGGAGTGCGCAAATAAGGAATGCACAAGTTCAGCTCTGC GGTTGCAAATTGATGCATACTCTGACTTCTTGGAGAGCTTTGCAAAGCTTGCTCGCTCTG CATGGACTGAGTTTGATTTATGGCTGATGGGCATTGGTCTTTCAGTTATGATACTGTCAG TTAGTACTCAGGCATGTATGCTTGTGAAGTTGAATATTGATCAAATTTCAGAAAAGGAAA GAGCAAGTTCAAGTTTCATTCCGAAAAATTTCTTTGCTTTTGCATTGGTTGCAATTCGGG CAGCAAGTTTCCTATCCAATAGCTATATATTGGCAGAAGGTAGAGTTGCAAACTTTCTTT TGGCCACGAGTTGCATTGCCAGTGTGTGGCACTCAGCCACAAAAGGAAAATTCATCATAG AAGAGTTTGTTTTTCTCCTCCTTAATATTTTCATACGATTTGGGATTGAGTTTGGGATGT CAAAACAAATTTCTGGGTCAATAATTTCAAATGACCACCCAGTCAGCATTATTTGTGGCC TGTTTGGTTCAAGTTTTTGCAGTGATCTCATGGAAATATTCCCCATCATATCTCTTACCT TAGTGGCCTATATAATTTTGAAGTGCATATCCTATGCGATCAGTCATAGATTCTTGAAGT ACTCTGTTATGTCTGGAAGCATCTTGAGTTATATATTTATAGCAATTCATTGGGCTTCTG AAAGTACTTTGCTCTCTCATACTAAAGCTACTAGAGAGACTGGAATAAGTTTAGCTCCTC GCCTTGTATACACTATTGGAGGTTTATCATTAGCAATATCTGCATTTTATCGGTTGTTTG GGTCAACTGATCATTTGAAGATGAATGAAAGGATAACTAGTTTGTCAGCTGTCATGCTGT GCTCCTGGAGTCCTACTATCTTGATCTTGTTGGGAAGACAAGGTCCCTTTGTGGCTCTAA TTTGTATGACTATAGCATGGTGTATAATAAAGTTACAGCAGAAAAATCAGAGAGAGCTGA AACTTGACAAAGGAATACATGCTGCTGACTCTGTTTCAGTAACACAATGGAGCTTTCTGG CAGTTTGTCTATTTTATCTGACGGGTCATTGGTGTACCTTTGATGGCCTCCGTTATGGTG CTGCATTCATTGGGTTTGATCATTTCCATATTATCCGACAAGGCCTTCTTCTTTCCATTG ATACTTTTGGCGTTTCTCACATACTGCCTGTTCTTAGTCTTCCGTTTATTGCCATATGCT GGTACAATTCTGCATCCAAGAACAGCAAGGTGAATGATGCCACTGTCACCAGATTAATAC AGGTGCTTTTGATGTATGGTTTAATTACATCAATCACAACAACGCTTACAATCATTTGTG TTACCATTCAACGGCGTCACTTGATGGTCTGGGGTTTATTTGCCCCAAAATACGTATTTG ATGCTATCGGGCTTCTTCTGACCGACTTGTTAGTTGTTCTGGCATCTATCTATTACAGCT GACCTTGCTATTTTGTTTCTTCAGATAGACAGGTAGTTTTAAAATTAACGCATTTACGAT TTGATTGCATCTATAGAGCTGAAATATTTTTTTTGTCACTACAGTCAGTGGTGTAAAATC ATGTGTATATTCAATTAAATTCATGTATTATCGTTGAATCAAATTTGTCATT