Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0170000-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:4800486:4808319:1 gene:Os10g0170000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-sensitive chloride conductance regulator family protein. (Os10t0170000-01)
Sequence

ATGGTGCTAGGCCTCTACGCCTTCGCCGACATCGCCGCCGACGGCGCCCCCCACCTCAAC
TCCGCCGCCGGGGAGGAGCTCGTCCGCGTCGAGCGCGCCGCTGCCGTCGCCCTCGGCTCC
CGCGCGCCGGAGCCCCCCGGGACCCTGTTCATCACCACCAGGAGGGTGATTTGGGTCAGT
GAGGTGGAGAAGGGCAAGGCCTACGCGGTGGATTTCCTCGCCGTCTCGCTCCACGCCGTC
TCTCGCGATCCGGAGGCGTACTCCTCCCCCTGCATCTACACGCAGATTGAGACAGAAGAT
GGTTCTGATGAGGAGTCCGATGAATCAGACTCCGAAGTAAATGTGGAAACAGAGCTATCG
AAAGTCACTGAGATGCGTATCATACCATCTGATCCTTGTCAGTTGGATGGACTCTTTGAA
GCATTCTCACATTGTGCTGAATTGAACCCCGATCCTAATGCTGAGAGTGATGAAGAGAAT
GGCTGGGCTCATAGAGATGAAGGTGATGAAGATATGACTGGTGGAAGTGATGCTGAATGT
GAGTTTTCAGATGTCAACCCGATAGGTCAAACTGATGAACATGATATTACTCATGCTGTA
GTTGAGCTTCAGATCAATGACCAACGTTTTGAGGATGCAGAGGAAGCAGAACATGAGACG
CATGGAAATGGACACTAA

Peptide Sequence

PEP ID

Os10t0170000-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:4800486:4808319:1 gene:Os10g0170000 transcript:Os10t0170000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-sensitive chloride conductance regulator family protein. (Os10t0170000-01)
Sequence

MVLGLYAFADIAADGAPHLNSAAGEELVRVERAAAVALGSRAPEPPGTLFITTRRVIWVS
EVEKGKAYAVDFLAVSLHAVSRDPEAYSSPCIYTQIETEDGSDEESDESDSEVNVETELS
KVTEMRIIPSDPCQLDGLFEAFSHCAELNPDPNAESDEENGWAHRDEGDEDMTGGSDAEC
EFSDVNPIGQTDEHDITHAVVELQINDQRFEDAEEAEHETHGNGH

Transcript Sequence

Transcript ID

Os10t0170000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:4800486:4808319:1 gene:Os10g0170000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-sensitive chloride conductance regulator family protein. (Os10t0170000-01)
Sequence

GGCTACCCCGTCGCCACCGCCGTTCGTTTCCCAAATTCACACAAGCCATGGTGCTAGGCC
TCTACGCCTTCGCCGACATCGCCGCCGACGGCGCCCCCCACCTCAACTCCGCCGCCGGGG
AGGAGCTCGTCCGCGTCGAGCGCGCCGCTGCCGTCGCCCTCGGCTCCCGCGCGCCGGAGC
CCCCCGGGACCCTGTTCATCACCACCAGGAGGGTGATTTGGGTCAGTGAGGTGGAGAAGG
GCAAGGCCTACGCGGTGGATTTCCTCGCCGTCTCGCTCCACGCCGTCTCTCGCGATCCGG
AGGCGTACTCCTCCCCCTGCATCTACACGCAGATTGAGACAGAAGATGGTTCTGATGAGG
AGTCCGATGAATCAGACTCCGAAGTAAATGTGGAAACAGAGCTATCGAAAGTCACTGAGA
TGCGTATCATACCATCTGATCCTTGTCAGTTGGATGGACTCTTTGAAGCATTCTCACATT
GTGCTGAATTGAACCCCGATCCTAATGCTGAGAGTGATGAAGAGAATGGCTGGGCTCATA
GAGATGAAGGTGATGAAGATATGACTGGTGGAAGTGATGCTGAATGTGAGTTTTCAGATG
TCAACCCGATAGGTCAAACTGATGAACATGATATTACTCATGCTGTAGTTGAGCTTCAGA
TCAATGACCAACGTTTTGAGGATGCAGAGGAAGCAGAACATGAGACGCATGGAAATGGAC
ACTAATGCAGATTAACTCCTTTGGGCCACCTTGTAAACTTGCATCAATGGCAACGTATGG
GAGAAAAAAGGTCTTGCTACTGGTCAAGAAAAATGTAAGCTGAAAGCATGCTGGAGGTCT
TTGTATGCGTTGTCTTCTGTAAAATACATGTATGATCATGCAACTTCATATTCAGAGATA
TTTTGACAATGTGCTCATGGAAAACATCCATACTTTGTAAGTGTTCAAGCTTAATTGTCA
GATTTTTTTTTATTTACATCCTTGATCGACCAAAGATGTATGCTGATAGCTGAGCAACAA
ACATTTCCTTTTCTGTAGCATTTGCTACTGATGAATGGTCCTGTGCTCAATGTCC