Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0167600-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:4663188:4667087:-1 gene:Os10g0167600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD photolyase, cyclobutane pyrimidine dimer photolyase description:Splicing variant (Os10t0167600-01);Cyclobutane pyrimidine dimer (CPD) photolyase, Ultraviolet-B (UVB) resistance (Os10t0167600-02)
Sequence	ATGCCGCCGACCTCAGTGAGCCCACCAAGAACAGCGCCGGGGCCGGCGAACCCGAGCCCG GCACACCCGTCCCGCGTGCGGGTGATCCACCCGGGCGGCGGGAAGCCCGGTGGGCCGGTG GTGTACTGGATGCTGCGGGACCAGCGGCTCGCCGACAACTGGGCGCTCCTCCACGCCGCC GGCCTCGCCGCCGCCTCCGCGTCCCCGCTCGCCGTCGCGTTCGCGCTGTTCCCGAGGCCC TTCCTCCTCTCCGCCCGCCGCCGCCAGCTCGGGTTCCTCCTCCGCGGCCTCCGCCGCCTC GCCGCCGACGCCGCCGCCCGCCACCTCCCCTTCTTCCTCTTCACCGGTGGGCCCGCGGAG ATCCCGGCGCTGGTGCGGCGCCTTGGTGCGTCGACGCTGGTCGCCGACTTCTCGCCGCTG CGGCCGGTGAGGGAGGCGCTCGACGCGGTGGTCGGCGACCTGCGGCGGGAGGCGCCCGGC GTGGCCGTGCACCAGGTGGACGCGCACAACGTGGTGCCTGTGTGGACGGCGTCGGCGAAG ATGGAGTATTCAGCCAAGACCTTCAGAGGCAAGGTGAGCAAGGTGATGGATGAGTACCTT GTGGAGTTCCCTGAATTGCCGGCGGTGGTGCCATGGGACAGGGAGCAGCCGGAGGGGGTC GACTGGGACGCACTCATCGCCAGGGTTTGCAGTGAGGCGGAGAATGTGCCGGAGATTGAC TGGTGTGAGCCTGGAGAGGAAGCAGCCATAGAGGCGCTTCTCGGCAGCAAGGATGGATTC CTGACGAAGAGGATCAAGAGCTATGAAACTGACCGGAATGATCCCACGAAACCACGGGCA TTGTCTGGGCTTTCACCATACCTTCATTTTGGGCACATTTCGGCACAGCGGTGTGCGCTC GAGGCAAAGAAATGCCGACATCTTAGTCCCAAGTCCGTCGATGCTTTCTTGGAGGAATTG GTTGTAAGGAGGGAATTAGCTGACAACTTCTGCTATTACCAACCTCAATATGATTCGCTG TCTGGTGCATGGGAATGGGCAAGGAAGACACTGATGGATCATGCTGCTGATAAAAGAGAG CATATCTATACGAGGGAACAGCTTGAGAATGCCAAAACACATGATCCTTTGTGGAATGCA TCGCAGTTGGAGATGGTTCACCATGGAAAAATGCATGGATTCATGAGAATGTACTGGGCC AAAAAGATTCTAGAATGGACTAGTGGACCAGAAGAAGCACTTTCAACTGCAATTTATTTA AATGACAAGTATGAGATAGATGGCAGGGACCCCAGTGGTTACGTCGGATGTATGTGGTCC ATATGTGGCCTCCATGATCAGGGTTGGAAGGAGCGTCCAGTATTTGGAAAGATACGTTAC ATGAATTACGCTGGCTGCAAGAGAAAATTCGATGTTGACGCTTACATTTCTTATGTCAAG AGATTAGCTGGTCAATCCAAGAAGAGGAACGCTGAGGAGTCTCCAAATCCTGTAGTCAAG CTTTCCAAGTCTCAGCACTAA

Peptide Sequence

PEP ID	Os10t0167600-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:4663188:4667087:-1 gene:Os10g0167600 transcript:Os10t0167600-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD photolyase, cyclobutane pyrimidine dimer photolyase description:Splicing variant (Os10t0167600-01);Cyclobutane pyrimidine dimer (CPD) photolyase, Ultraviolet-B (UVB) resistance (Os10t0167600-02)
Sequence	MPPTSVSPPRTAPGPANPSPAHPSRVRVIHPGGGKPGGPVVYWMLRDQRLADNWALLHAA GLAAASASPLAVAFALFPRPFLLSARRRQLGFLLRGLRRLAADAAARHLPFFLFTGGPAE IPALVRRLGASTLVADFSPLRPVREALDAVVGDLRREAPGVAVHQVDAHNVVPVWTASAK MEYSAKTFRGKVSKVMDEYLVEFPELPAVVPWDREQPEGVDWDALIARVCSEAENVPEID WCEPGEEAAIEALLGSKDGFLTKRIKSYETDRNDPTKPRALSGLSPYLHFGHISAQRCAL EAKKCRHLSPKSVDAFLEELVVRRELADNFCYYQPQYDSLSGAWEWARKTLMDHAADKRE HIYTREQLENAKTHDPLWNASQLEMVHHGKMHGFMRMYWAKKILEWTSGPEEALSTAIYL NDKYEIDGRDPSGYVGCMWSICGLHDQGWKERPVFGKIRYMNYAGCKRKFDVDAYISYVK RLAGQSKKRNAEESPNPVVKLSKSQH

Transcript Sequence

Transcript ID	Os10t0167600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:4663188:4667087:-1 gene:Os10g0167600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD photolyase, cyclobutane pyrimidine dimer photolyase description:Splicing variant (Os10t0167600-01);Cyclobutane pyrimidine dimer (CPD) photolyase, Ultraviolet-B (UVB) resistance (Os10t0167600-02)
Sequence	AATTCACACCCACAAACGCACGCCCGCACGCGCGCGCGCGCGCTCAGAGACCTCCGTCGC CGCCCGCCGCACGCCGGCGACCCACCGCGCCGCACGATGCCGCCGACCTCAGTGAGCCCA CCAAGAACAGCGCCGGGGCCGGCGAACCCGAGCCCGGCACACCCGTCCCGCGTGCGGGTG ATCCACCCGGGCGGCGGGAAGCCCGGTGGGCCGGTGGTGTACTGGATGCTGCGGGACCAG CGGCTCGCCGACAACTGGGCGCTCCTCCACGCCGCCGGCCTCGCCGCCGCCTCCGCGTCC CCGCTCGCCGTCGCGTTCGCGCTGTTCCCGAGGCCCTTCCTCCTCTCCGCCCGCCGCCGC CAGCTCGGGTTCCTCCTCCGCGGCCTCCGCCGCCTCGCCGCCGACGCCGCCGCCCGCCAC CTCCCCTTCTTCCTCTTCACCGGTGGGCCCGCGGAGATCCCGGCGCTGGTGCGGCGCCTT GGTGCGTCGACGCTGGTCGCCGACTTCTCGCCGCTGCGGCCGGTGAGGGAGGCGCTCGAC GCGGTGGTCGGCGACCTGCGGCGGGAGGCGCCCGGCGTGGCCGTGCACCAGGTGGACGCG CACAACGTGGTGCCTGTGTGGACGGCGTCGGCGAAGATGGAGTATTCAGCCAAGACCTTC AGAGGCAAGGTGAGCAAGGTGATGGATGAGTACCTTGTGGAGTTCCCTGAATTGCCGGCG GTGGTGCCATGGGACAGGGAGCAGCCGGAGGGGGTCGACTGGGACGCACTCATCGCCAGG GTTTGCAGTGAGGCGGAGAATGTGCCGGAGATTGACTGGTGTGAGCCTGGAGAGGAAGCA GCCATAGAGGCGCTTCTCGGCAGCAAGGATGGATTCCTGACGAAGAGGATCAAGAGCTAT GAAACTGACCGGAATGATCCCACGAAACCACGGGCATTGTCTGGGCTTTCACCATACCTT CATTTTGGGCACATTTCGGCACAGCGGTGTGCGCTCGAGGCAAAGAAATGCCGACATCTT AGTCCCAAGTCCGTCGATGCTTTCTTGGAGGAATTGGTTGTAAGGAGGGAATTAGCTGAC AACTTCTGCTATTACCAACCTCAATATGATTCGCTGTCTGGTGCATGGGAATGGGCAAGG AAGACACTGATGGATCATGCTGCTGATAAAAGAGAGCATATCTATACGAGGGAACAGCTT GAGAATGCCAAAACACATGATCCTTTGTGGAATGCATCGCAGTTGGAGATGGTTCACCAT GGAAAAATGCATGGATTCATGAGAATGTACTGGGCCAAAAAGATTCTAGAATGGACTAGT GGACCAGAAGAAGCACTTTCAACTGCAATTTATTTAAATGACAAGTATGAGATAGATGGC AGGGACCCCAGTGGTTACGTCGGATGTATGTGGTCCATATGTGGCCTCCATGATCAGGGT TGGAAGGAGCGTCCAGTATTTGGAAAGATACGTTACATGAATTACGCTGGCTGCAAGAGA AAATTCGATGTTGACGCTTACATTTCTTATGTCAAGAGATTAGCTGGTCAATCCAAGAAG AGGAACGCTGAGGAGTCTCCAAATCCTGTAGTCAAGCTTTCCAAGTCTCAGCACTAAATC CGACTAGGAAAATATGAACATTTCTTTGTGTGGTATACCACGAGCTCGGAAAATTGAAGA ACAGTGCTAACTTGAGGTAGATCATGTAGGGTATACACTGTAGATCTGTTTGTCTGATAT CCTTGTAGGCTTCTAATCATTCAAAATTTGCTAGCATTGTTAAGACTTTAAGACATACAG TGTCACACCAGTTGAATTCAAGTGT