Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0163100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:4281031:4286574:-1 gene:Os10g0163100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 9B description:Similar to Autophagy protein Apg9 containing protein, expressed. (Os10t0163100-01)
Sequence	ATGATGTCCTTCCTTCCGAAGGGCAAAACTACACAAACAGCGTTTAAGTGGCCATGGAGA GGTGAATCGCAGCTATCGGCGCATCTTCTCATTGATATTCCACCTGAAATCGAATTGTCG GACTACCGAAGATTGCCAAGCCCTGGTAATGAGAGCCCATCAGGGCTACTTCATGGAGAA GACTTTAAGGAGGAGGTGATCCCTGACTTGGATATTTTCTTTGAGAGGCTCTATGAGTAT TTCTGCGCGAAAGGTCTGCGGTGCATCATCACCAAGTGGATAATTGAGATCCTCAATGTG ACGTTTATGGTTTGCTGTATCGGGTTTTTCTTCTTGTTTGTTGATTGGCCTGCCCTTGGC GATTTGAAATGTGGAGTGGAAGCGCTCGAGTCAGGGGCAAAACCTTGTGACCTAATGAAA CTCATTAAGTATCGTCCCCTAGATCCTTTCACATTTACAAAGTTTATCACTATTGGATCC ATGGTTATACTCTCAACTTACGGAATCATTAACTTTGTGAAGTTTTTTGTAAAACTGAGA AGCACACTCAAGGTCCGTGACTTCTACTGTAACAGTCTCAAGGTTACAGATCTCGAAATT CAGACTATATCATGGCCTAGAGTAGTTGAGAAGGTCGTACTTCTGCAGAAGTCACAACGA CTTTGTGTCGTTAAAGATCTCACGGAGCATGATATAATCATGCGAATAATGCGTAAACAA AACTACCTGATTGGGATGGTTAATAAAGGTATCATCGCATTGCCAATCCCCTCTTGGCTT CCTGGAGTTGGCCCAACTGTCAGCTCACGTATGCATGGAAAAAAAAGCTATCTGATGCTT CCAAAGGCCCTGGAGTGGACATTGAATTGGTGCATCTTCCAAACCATGTTTGATAGGAAA TTTTGTGTTAGAAAAGACATTCTGACAAGTCCGTCTTTATTGAAGAAACGGCTTGTATTT ATGGGTATTGCCATGTTTCTTCTGTCACCTTGTCTTGTTATCTTCCCATTGGTATACCTA TTTCTGAGATATGCAGAAGAATTCTACAATCACCCCAGTACGGCATCATCTCGAAAATGG TCGAATCTTTCAAAGTGGATTTTGAGGGAATACAATGAGGTTGACCATTTCTTCAAACAT AGGTTGAACAACAGTAGTGTCAACTCACTAAATTATTTGAAGCAGTTTCCAACTCCACTA GTATCTATTATTGCAAAATTCATATCGTTTGTATCTGGTGGATTGGCTGGAATTCTTCTC ATCCTTGGATTTCTAGGTGAATCCATCCTTGAGGGTCATGTATTTGGCCGAAATCTTCTC TGGTATACTATTGTTTTTGGAACAATAGCAACTGTTAGTCGGAATGTTGTGGTTGATGAA CTCCAAGTGATTGATCCAGAAGGAGCTATGTCCTTTGTTCTGCAGCAGACACACTACATG CCTAAAAGGTGGCGCGGTAAAGAGGGCAGTGAACTTGTACGAAGGGACTTTGAATCTCTG TTTCAGTATACCATAACGATGCTACTAGAAGAGATGGCCTCAATTTTCATCACTCCATAT CTGCTAATATTTGTGGTTCCAAAGCGTGTTGATGATATTCTACGCTTCATATCAGACTTC ACAGTTTATGTTGATGGAGTGGGAGATGTGTGCAGCTTAAGCATGTTCGACTTAAGAAGA CATGGAAATAGAAACTACGGTTCACCACATAATGCAGTTAAAAGCATGAGAAGCTCCCAA GGAAAAATGGAGAAATCACTATTAAGTTTCCAAAGCACCTACACATCATGGGAGCCAAAC GCAGATGGCAAGAAATTTATTTGCAACCTCCAGAAATTCAAGGAGAAACAAATCCGTCAA CATACCTTTCAAACAACGGAATCATCACAGCTTGGGTTGAGTTGTAGAGGTCAAACTGCA GTTTTCCATCGACTGCTCCCTAGAAACATCTATCCTGGCAATGGGGTCATTTTTAACTTT GATCCATTAGGACTGCTCGACACAGATCAAAGAGCTTGTCCATATATCCTGGATTGGTAT TACACACACCAACACACAAATAGAGAAGCGGGCTCATCTTCCCACCTTAATGAAGCATCA CCTGAGCAACAGGAGGAGATATGGCCACCTCTGAGCAAACCATTAACAGAAATTGAAGAT GAGCAAATCTGGGATTCTGATTTATATAGAAGAGCTCGAAGCTACCTGGAGGCATCAACA TCAAGTGCATTCTTTCGACAGGCCACCACCTTCAAGCGCCATGGCAGGGAACAAAATTCT ACCAGCCATCAATGGTGGGCTCAGGCCTCGAGGCAGCAGGCTGATCCACGAAACAGTTTT CAAGGGCCTCCTCAAGACAGTTTTCTTGAGCCTCCGGACTTCCGAAATCATTTGGAAGCT AGCCATGATTCCAGCCATCAAAGTGATTGTAGGCTGACCTCCAGAAGGTCAACTGATCCA CAAGACAGCTTCGTTGAGCCTCCTGATTTTGGTGATTACATGTCCTGTCATAGCTCTAGC TATCATGGCGATGAAACGTCGGATGGAAACTCAGAACTAGATCAAAGCAACAATAGTTGG CGAAGCCCCCATGCCCTGTCAAAGACAAGGTACATGGGTGATGATGATCTTGACCTAGAA CAAGGCCCGAGTTTCCATTTTACTGATGCCCCTCAGAAGGACAGTGGAAGTGAAGGAGAT GGACATGGTGTAGCCAATATTTACAGCTCTACGCCAGCCAGCCTTCCTGTACGGATAATA CCTAGAAGCAGTGACCCAGTTTAG

Peptide Sequence

PEP ID	Os10t0163100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:4281031:4286574:-1 gene:Os10g0163100 transcript:Os10t0163100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 9B description:Similar to Autophagy protein Apg9 containing protein, expressed. (Os10t0163100-01)
Sequence	MMSFLPKGKTTQTAFKWPWRGESQLSAHLLIDIPPEIELSDYRRLPSPGNESPSGLLHGE DFKEEVIPDLDIFFERLYEYFCAKGLRCIITKWIIEILNVTFMVCCIGFFFLFVDWPALG DLKCGVEALESGAKPCDLMKLIKYRPLDPFTFTKFITIGSMVILSTYGIINFVKFFVKLR STLKVRDFYCNSLKVTDLEIQTISWPRVVEKVVLLQKSQRLCVVKDLTEHDIIMRIMRKQ NYLIGMVNKGIIALPIPSWLPGVGPTVSSRMHGKKSYLMLPKALEWTLNWCIFQTMFDRK FCVRKDILTSPSLLKKRLVFMGIAMFLLSPCLVIFPLVYLFLRYAEEFYNHPSTASSRKW SNLSKWILREYNEVDHFFKHRLNNSSVNSLNYLKQFPTPLVSIIAKFISFVSGGLAGILL ILGFLGESILEGHVFGRNLLWYTIVFGTIATVSRNVVVDELQVIDPEGAMSFVLQQTHYM PKRWRGKEGSELVRRDFESLFQYTITMLLEEMASIFITPYLLIFVVPKRVDDILRFISDF TVYVDGVGDVCSLSMFDLRRHGNRNYGSPHNAVKSMRSSQGKMEKSLLSFQSTYTSWEPN ADGKKFICNLQKFKEKQIRQHTFQTTESSQLGLSCRGQTAVFHRLLPRNIYPGNGVIFNF DPLGLLDTDQRACPYILDWYYTHQHTNREAGSSSHLNEASPEQQEEIWPPLSKPLTEIED EQIWDSDLYRRARSYLEASTSSAFFRQATTFKRHGREQNSTSHQWWAQASRQQADPRNSF QGPPQDSFLEPPDFRNHLEASHDSSHQSDCRLTSRRSTDPQDSFVEPPDFGDYMSCHSSS YHGDETSDGNSELDQSNNSWRSPHALSKTRYMGDDDLDLEQGPSFHFTDAPQKDSGSEGD GHGVANIYSSTPASLPVRIIPRSSDPV

Transcript Sequence

Transcript ID	Os10t0163100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:4281031:4286574:-1 gene:Os10g0163100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 9B description:Similar to Autophagy protein Apg9 containing protein, expressed. (Os10t0163100-01)
Sequence	TCCGATTCCCCCTTCCGCTTTTCTACCACCACCGCTGCTGCTGCTGCTGCTAACCCCGCC GCCGAAGCAATCCCCCCGCGGCGGCCTCCCCGACTCCGATTCCGGCGGCCTCCTCCTCCT CTTCCTCCGCCGACCCCGAGTCCCTCCCGGCCTCCGATTCCGTACGCCGCCGCTCCCGCC CCCGTCCTGGTTGTGTGCTGTGGCATGGGAGATAAGCCTGAAGCTCTTTTCACTCGCCGT TTTCTTAAATGATGTCCTTCCTTCCGAAGGGCAAAACTACACAAACAGCGTTTAAGTGGC CATGGAGAGGTGAATCGCAGCTATCGGCGCATCTTCTCATTGATATTCCACCTGAAATCG AATTGTCGGACTACCGAAGATTGCCAAGCCCTGGTAATGAGAGCCCATCAGGGCTACTTC ATGGAGAAGACTTTAAGGAGGAGGTGATCCCTGACTTGGATATTTTCTTTGAGAGGCTCT ATGAGTATTTCTGCGCGAAAGGTCTGCGGTGCATCATCACCAAGTGGATAATTGAGATCC TCAATGTGACGTTTATGGTTTGCTGTATCGGGTTTTTCTTCTTGTTTGTTGATTGGCCTG CCCTTGGCGATTTGAAATGTGGAGTGGAAGCGCTCGAGTCAGGGGCAAAACCTTGTGACC TAATGAAACTCATTAAGTATCGTCCCCTAGATCCTTTCACATTTACAAAGTTTATCACTA TTGGATCCATGGTTATACTCTCAACTTACGGAATCATTAACTTTGTGAAGTTTTTTGTAA AACTGAGAAGCACACTCAAGGTCCGTGACTTCTACTGTAACAGTCTCAAGGTTACAGATC TCGAAATTCAGACTATATCATGGCCTAGAGTAGTTGAGAAGGTCGTACTTCTGCAGAAGT CACAACGACTTTGTGTCGTTAAAGATCTCACGGAGCATGATATAATCATGCGAATAATGC GTAAACAAAACTACCTGATTGGGATGGTTAATAAAGGTATCATCGCATTGCCAATCCCCT CTTGGCTTCCTGGAGTTGGCCCAACTGTCAGCTCACGTATGCATGGAAAAAAAAGCTATC TGATGCTTCCAAAGGCCCTGGAGTGGACATTGAATTGGTGCATCTTCCAAACCATGTTTG ATAGGAAATTTTGTGTTAGAAAAGACATTCTGACAAGTCCGTCTTTATTGAAGAAACGGC TTGTATTTATGGGTATTGCCATGTTTCTTCTGTCACCTTGTCTTGTTATCTTCCCATTGG TATACCTATTTCTGAGATATGCAGAAGAATTCTACAATCACCCCAGTACGGCATCATCTC GAAAATGGTCGAATCTTTCAAAGTGGATTTTGAGGGAATACAATGAGGTTGACCATTTCT TCAAACATAGGTTGAACAACAGTAGTGTCAACTCACTAAATTATTTGAAGCAGTTTCCAA CTCCACTAGTATCTATTATTGCAAAATTCATATCGTTTGTATCTGGTGGATTGGCTGGAA TTCTTCTCATCCTTGGATTTCTAGGTGAATCCATCCTTGAGGGTCATGTATTTGGCCGAA ATCTTCTCTGGTATACTATTGTTTTTGGAACAATAGCAACTGTTAGTCGGAATGTTGTGG TTGATGAACTCCAAGTGATTGATCCAGAAGGAGCTATGTCCTTTGTTCTGCAGCAGACAC ACTACATGCCTAAAAGGTGGCGCGGTAAAGAGGGCAGTGAACTTGTACGAAGGGACTTTG AATCTCTGTTTCAGTATACCATAACGATGCTACTAGAAGAGATGGCCTCAATTTTCATCA CTCCATATCTGCTAATATTTGTGGTTCCAAAGCGTGTTGATGATATTCTACGCTTCATAT CAGACTTCACAGTTTATGTTGATGGAGTGGGAGATGTGTGCAGCTTAAGCATGTTCGACT TAAGAAGACATGGAAATAGAAACTACGGTTCACCACATAATGCAGTTAAAAGCATGAGAA GCTCCCAAGGAAAAATGGAGAAATCACTATTAAGTTTCCAAAGCACCTACACATCATGGG AGCCAAACGCAGATGGCAAGAAATTTATTTGCAACCTCCAGAAATTCAAGGAGAAACAAA TCCGTCAACATACCTTTCAAACAACGGAATCATCACAGCTTGGGTTGAGTTGTAGAGGTC AAACTGCAGTTTTCCATCGACTGCTCCCTAGAAACATCTATCCTGGCAATGGGGTCATTT TTAACTTTGATCCATTAGGACTGCTCGACACAGATCAAAGAGCTTGTCCATATATCCTGG ATTGGTATTACACACACCAACACACAAATAGAGAAGCGGGCTCATCTTCCCACCTTAATG AAGCATCACCTGAGCAACAGGAGGAGATATGGCCACCTCTGAGCAAACCATTAACAGAAA TTGAAGATGAGCAAATCTGGGATTCTGATTTATATAGAAGAGCTCGAAGCTACCTGGAGG CATCAACATCAAGTGCATTCTTTCGACAGGCCACCACCTTCAAGCGCCATGGCAGGGAAC AAAATTCTACCAGCCATCAATGGTGGGCTCAGGCCTCGAGGCAGCAGGCTGATCCACGAA ACAGTTTTCAAGGGCCTCCTCAAGACAGTTTTCTTGAGCCTCCGGACTTCCGAAATCATT TGGAAGCTAGCCATGATTCCAGCCATCAAAGTGATTGTAGGCTGACCTCCAGAAGGTCAA CTGATCCACAAGACAGCTTCGTTGAGCCTCCTGATTTTGGTGATTACATGTCCTGTCATA GCTCTAGCTATCATGGCGATGAAACGTCGGATGGAAACTCAGAACTAGATCAAAGCAACA ATAGTTGGCGAAGCCCCCATGCCCTGTCAAAGACAAGGTACATGGGTGATGATGATCTTG ACCTAGAACAAGGCCCGAGTTTCCATTTTACTGATGCCCCTCAGAAGGACAGTGGAAGTG AAGGAGATGGACATGGTGTAGCCAATATTTACAGCTCTACGCCAGCCAGCCTTCCTGTAC GGATAATACCTAGAAGCAGTGACCCAGTTTAGGTTGGTAGACACACGAAAAAGTACTAGT TGGAACACTTGTGAACGCGCATTTTCCGTGTTCTGATAGATATATACTACCTCCTTCCCT