Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0162832-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:4023633:4029902:1 gene:Os10g0162832 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRR14. (Os10t0162832-01)
Sequence

ATGGCAGAGGGTGTTGTTGGAATTATAATTCTGAAGCTTGGTTTAGCCTTGGCAACAGAC
ACAAGTAGGGTTGGTAGAAACTGGCTCTGCCATGAGGCTTCTGCTCTTGCTAGAATCTTT
AGTCAGATCCGTGATATGAAGGAGGAGTTGGAGAGCATGCAATCCTTCCTACAAGGAGCT
GAGAGGTTCAAGGATACTGACAATACCACGGCCAACTTCATCAAGAAGATCCGTTGCATT
GCTTTCGAGATTGAGGATGTTGTTGACGAGTTCACCTCCAAGATGGAGGTGAAACAAGGT
GGGTTGGCTTCAAAGATAAAGCAGAGGATTTGTCACATTAAAACTTGGCACCGTCTAGCA
TTCAAATTTCAAGATATCAAACTAAAGCTGGAGAATGTTGATAGGAGAAAGGTCCGATAT
GATATGACAGGATTGGTGAAAAATGCAGAACAAAGTGATGCTAATTGCAGATATACTGAT
CATACATCATACTTTCCAACTGAGGAAGATCTTGTTGGTATTGATGATAATAAAAAGCTT
TTGATGAATTGGCTGAGGTGTGATTCGCAACTGCAGAGTGTAATTACCAGTGTGTGTGGG
ATGGGAGGAGTAGGCAAAACCACATTGGTTGCCCATGTTTACAACAATGTGAAGGTAGAC
TTTGACAGTGCAGCTTGGATAACTGTTTCAAAAGCGTATCAGGTTGAGGAATTGTTAAGG
CAGATTATCAAGGGATTCAATAGTAATGATCTAAAGAGTGAACTCCGTGTTGACATTGTT
GACATGGAAAAGAGGACCCTGGTTGAGATCATTCGCGATTATTTAAAACGGAAAAGGTTC
CTGCTGGTTCTGGATGATGTCTGGGGTGTTGATATGTGGTTCAAGATTAGAGAGGCTTTT
CCTGCCAATAGCATTGGTCGATTTGTTATCACCTCAAGAGTCCATGACATAGCATTAATA
GCAACTGGAAATCATAAAATTGAGTTGAAACCCCTAGAAGCGCACCATTCTTGGGAGTTA
TTTTGTAAATAA

Peptide Sequence

PEP ID

Os10t0162832-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:4023633:4029902:1 gene:Os10g0162832 transcript:Os10t0162832-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRR14. (Os10t0162832-01)
Sequence

MAEGVVGIIILKLGLALATDTSRVGRNWLCHEASALARIFSQIRDMKEELESMQSFLQGA
ERFKDTDNTTANFIKKIRCIAFEIEDVVDEFTSKMEVKQGGLASKIKQRICHIKTWHRLA
FKFQDIKLKLENVDRRKVRYDMTGLVKNAEQSDANCRYTDHTSYFPTEEDLVGIDDNKKL
LMNWLRCDSQLQSVITSVCGMGGVGKTTLVAHVYNNVKVDFDSAAWITVSKAYQVEELLR
QIIKGFNSNDLKSELRVDIVDMEKRTLVEIIRDYLKRKRFLLVLDDVWGVDMWFKIREAF
PANSIGRFVITSRVHDIALIATGNHKIELKPLEAHHSWELFCK

Transcript Sequence

Transcript ID

Os10t0162832-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:4023633:4029902:1 gene:Os10g0162832 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LRR14. (Os10t0162832-01)
Sequence

AAGACTCAAGAACCACTCTCCCGGAGGCCGGAGCCTCACCTGGCCCTCTCTTCCTGCTGC
CGGAGCCGCTTCAGGAGCTTGGATTTCGCCGCAGGTTGAAGACATTTTCCCCGTTTAAGA
AGTCAAGGCTCAAGGTCTAATAACATATTACCATGGCAGAGGGTGTTGTTGGAATTATAA
TTCTGAAGCTTGGTTTAGCCTTGGCAACAGACACAAGTAGGGTTGGTAGAAACTGGCTCT
GCCATGAGGCTTCTGCTCTTGCTAGAATCTTTAGTCAGATCCGTGATATGAAGGAGGAGT
TGGAGAGCATGCAATCCTTCCTACAAGGAGCTGAGAGGTTCAAGGATACTGACAATACCA
CGGCCAACTTCATCAAGAAGATCCGTTGCATTGCTTTCGAGATTGAGGATGTTGTTGACG
AGTTCACCTCCAAGATGGAGGTGAAACAAGGTGGGTTGGCTTCAAAGATAAAGCAGAGGA
TTTGTCACATTAAAACTTGGCACCGTCTAGCATTCAAATTTCAAGATATCAAACTAAAGC
TGGAGAATGTTGATAGGAGAAAGGTCCGATATGATATGACAGGATTGGTGAAAAATGCAG
AACAAAGTGATGCTAATTGCAGATATACTGATCATACATCATACTTTCCAACTGAGGAAG
ATCTTGTTGGTATTGATGATAATAAAAAGCTTTTGATGAATTGGCTGAGGTGTGATTCGC
AACTGCAGAGTGTAATTACCAGTGTGTGTGGGATGGGAGGAGTAGGCAAAACCACATTGG
TTGCCCATGTTTACAACAATGTGAAGGTAGACTTTGACAGTGCAGCTTGGATAACTGTTT
CAAAAGCGTATCAGGTTGAGGAATTGTTAAGGCAGATTATCAAGGGATTCAATAGTAATG
ATCTAAAGAGTGAACTCCGTGTTGACATTGTTGACATGGAAAAGAGGACCCTGGTTGAGA
TCATTCGCGATTATTTAAAACGGAAAAGGTTCCTGCTGGTTCTGGATGATGTCTGGGGTG
TTGATATGTGGTTCAAGATTAGAGAGGCTTTTCCTGCCAATAGCATTGGTCGATTTGTTA
TCACCTCAAGAGTCCATGACATAGCATTAATAGCAACTGGAAATCATAAAATTGAGTTGA
AACCCCTAGAAGCGCACCATTCTTGGGAGTTATTTTGTAAATAAGCATTTTGGAACGAGG
ACAGAATATGCCCATTGGATCTACAGAATTTGGCGCAAAGATTTGTGGATAAATGCAATG
GTTTACCTATTGCTATTGCATGTATAGGTCGTTTGCTGTCATGCAAAAGCCCATGTTACT
CTGAATGGGAAAATTTATACAAAGAACTAGAGTTACAGCTGAGCAATAATGCGATTCTTG
ATGTTAATATTGTTCTAAAGCTCAGTTTGGACGACCTTCCATATATTTTGAAAAACTGCT
TTTTACACTGCACAATATTTCCGGAGGACTATTTGATTAAGAGAAAAAGGCTGATTAGAC
ATTGGGTCACAGCGGGATTCATCGCAGTTACTGAACACAAGACAATGGAGGATGTGGCTG
AGGGTTATTTGTATGAACTTGTAAACCGAAGCTTATTACAGGTAGTGGAGAGGAATGAAA
GTGGACGAGTGCGGAGTTGTCGAATGCATGATATCATTCGTATTCTTGCTCTGACCAAAT
CAAATGAGGAAAGCTTCTGTAGTGTTTATGATGGCTCCAGAACTACTTCAAAACAAAATA
CACGTCGTCTATCAATCCAAAGTTCTGATATAGAGAAGTTCACTGTTTCTAGTGAGGTCC
ATCTCCGTGCAATCTATGCTTTCAATGAGTTGGTGACTAGTGATTCACTGAAGTTTTTCT
TGAAATCTTTCAACTTGCTATCAACTCTGGATCTGCAAGGTACCCAAATCAGGAAGCTAC
CGAAAGAGCTTTTTAAGTTGTTCAATCTGCATTTTCTGTGTCTTAGAGACACTTTCGTTG
AAGATATCCCTGAAACAGTTGGAAGATTACAAAAATTAGAAGTCTTGGATGCTTTCAATG
CGAGGCTAGTCAGTTTGCCACAGAGTATAGCAAATCTTCATAAGTTGAGATATCTTTACG
TAGCTACTGATCCAAGGAAAGGTACTAAAGGAGTTGTTCCCTGGATTGGAATTCAGGTGC
CTAATGGCATAAGGAACTTGAAAAGCTTGCAAGCATTACAACTTGTTGAGGCTAACTCAG
AGACTTTGTGTCATCTTGGTGCTCTGACAGAGTTAAGAACTTTTGCCATCACCCAGGTGA
GGAGAGAACAATGTTCTGATTTGTGCAATGCTATCATGAACATGAACCATCTTGCTAGTC
TTTCTATTATGGCTATAAATGAGACGGAAACACTCGAATTGGATGGACTCCGTTTACCCC
CATCTCTTTCAAAGCTTGAATTAGGAGGGAAGCTGGACAAGGAATCGATGCCTCGGATTG
TCTCATCCTTTTCAGATCTTGGTAACCTCACCTTATTGACCTTAGCCTTGTCTAAACTTG
ATGAGAACTCATTTTCTTGTCTCTTGCTGTTAAATGGTCTACGGGGAATTTGGCTTGATA
AGGCTTATGAAGGGAAGAAACTGCATTTCAATGCCATGTCACTTCCATCGCTCCGACTAC
TAGCAATATCAGATGCTCCGGAGCTGAATGATGTTGTAATAGAACAAAGTGCATTGCAAA
ACCTTATTCGATTAACACTCATTGATTGTCCAGAGCTGAAGACCCTCCCTGATGGCATTG
AACATCTCATAACTCTAGAGGAATTATATATGCGAGGGGCTTCGAAAGAGCTCACGAAGA
AGCTTAAGCAAAAAGAAGACTCAAATTATTCCAACACATATCTTATGAAGATCAATCACA
TCAGAAGGGTTACTGTTTTTCCATGAAATATTTGAGAAACACTCTAGTATCTTCAGCTTA
TGTGTCTATGGAGAGGTAAATTTTTCACCTGTAGTATCTAGGACAAATTAAAGTTTATCT
AGTGGTTGATTGTACTTTATTCAGAGCCTAATCAATGACATTTTAAGCTCCATTTTGATC
TTTCTAGACCAGTTTCAGATTATAGAAACAATAATATAATGAAATAAAATTAT