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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0162600-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:3991788:3993428:-1 gene:Os10g0162600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRL1L2 description:Lateral organ boundaries, LOB domain containing protein. (Os10t0162600-00)
Sequence

ATGAGCTCGTCGGTGGTTGTGAGCGCGAGCGGCAGCGGCAGCGGCGGCGGAGGAGGAGGA
GGAGGTGGCGGCGCCGGAGGTGGAGGAGGAGGTGGGCCGTGCGGGGCGTGCAAGTTCTTG
CGGCGGAAGTGCGTGCAGGGGTGCATCTTCGCGCCCTACTTCGACTCGGAGGCCGGGGCG
GCGCACTTCGCGGCGGTGCACAAGGTGTTCGGCGCCAGCAACGTGTCCAAGCTGCTGCAG
CAGATCCCGGCGCACCGCCGCCTCGACGCCGTCGTCACCATCTGCTACGAGGCCCAGGCC
CGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCCACATCTTCCACCTCCAACACCAGGTG
GCAGGTCTCCAGTCCGAGCTGAACTACCTGCAAGGTCACCTCTCGACGATGGAGCTGCCG
TCGCCGCCGCCCTACGTCGCCGGGCCGACCCTGGCGCCGCCACAGCCACAGCCACTGATG
CCGATGACCGCCGCCGCCAACTTCAACTTCTCCGACCTGCCATCGTCGTCGGCGGCCAAC
ATTCCGGTCACCGCCGACCTGTCCACCCTCTTTGACCCACTGCCGGCGGCGCAGCCGCAG
TGGGGACTATACCAGCAGCAGCAACACCACCACCAGCAGCTGCATCATCACCCCTATGAC
CGGATGGGCGACGGCTCGTCGAGCAGCAGAGGCGGCGACGACGATGGCAGCGACGGCGGC
GACTTGCAAGCGCTGGCGAGGGAGCTTCTTGACCGCCATGGACGGTCGTCGTCGAGCTCC
AAGCTGGAGCCGCCACCTCACACACAGTGA

Peptide Sequence

PEP ID

Os10t0162600-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:3991788:3993428:-1 gene:Os10g0162600 transcript:Os10t0162600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRL1L2 description:Lateral organ boundaries, LOB domain containing protein. (Os10t0162600-00)
Sequence

MSSSVVVSASGSGSGGGGGGGGGGAGGGGGGGPCGACKFLRRKCVQGCIFAPYFDSEAGA
AHFAAVHKVFGASNVSKLLQQIPAHRRLDAVVTICYEAQARLRDPVYGCVAHIFHLQHQV
AGLQSELNYLQGHLSTMELPSPPPYVAGPTLAPPQPQPLMPMTAAANFNFSDLPSSSAAN
IPVTADLSTLFDPLPAAQPQWGLYQQQQHHHQQLHHHPYDRMGDGSSSSRGGDDDGSDGG
DLQALARELLDRHGRSSSSSKLEPPPHTQ

Transcript Sequence

Transcript ID

Os10t0162600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:3991788:3993428:-1 gene:Os10g0162600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRL1L2 description:Lateral organ boundaries, LOB domain containing protein. (Os10t0162600-00)
Sequence

ATGAGCTCGTCGGTGGTTGTGAGCGCGAGCGGCAGCGGCAGCGGCGGCGGAGGAGGAGGA
GGAGGTGGCGGCGCCGGAGGTGGAGGAGGAGGTGGGCCGTGCGGGGCGTGCAAGTTCTTG
CGGCGGAAGTGCGTGCAGGGGTGCATCTTCGCGCCCTACTTCGACTCGGAGGCCGGGGCG
GCGCACTTCGCGGCGGTGCACAAGGTGTTCGGCGCCAGCAACGTGTCCAAGCTGCTGCAG
CAGATCCCGGCGCACCGCCGCCTCGACGCCGTCGTCACCATCTGCTACGAGGCCCAGGCC
CGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCCACATCTTCCACCTCCAACACCAGGTG
GCAGGTCTCCAGTCCGAGCTGAACTACCTGCAAGGTCACCTCTCGACGATGGAGCTGCCG
TCGCCGCCGCCCTACGTCGCCGGGCCGACCCTGGCGCCGCCACAGCCACAGCCACTGATG
CCGATGACCGCCGCCGCCAACTTCAACTTCTCCGACCTGCCATCGTCGTCGGCGGCCAAC
ATTCCGGTCACCGCCGACCTGTCCACCCTCTTTGACCCACTGCCGGCGGCGCAGCCGCAG
TGGGGACTATACCAGCAGCAGCAACACCACCACCAGCAGCTGCATCATCACCCCTATGAC
CGGATGGGCGACGGCTCGTCGAGCAGCAGAGGCGGCGACGACGATGGCAGCGACGGCGGC
GACTTGCAAGCGCTGGCGAGGGAGCTTCTTGACCGCCATGGACGGTCGTCGTCGAGCTCC
AAGCTGGAGCCGCCACCTCACACACAGTGA