Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0158400-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:3696797:3698817:1 gene:Os10g0158400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYKETIDE SYNTHASE 16 description:Similar to Chalcone and stilbene synthases, N-terminal domain containing protein. (Os10t0158400-00)
Sequence

ATGCCTGGAGCAACTACCGCCGCTATTGTTGACAGCCGCCGCGGCACACAACATTCGGAA
GGTCCTGCAACGATCCTCGCCATCGGCACTGCAAACCCGGAAAACATCATGTTTCAGGAT
AACTTTGCCGACTACTACTTTGGTCTAACCAAAAGCGAGCACCTTACCGAGCTCAAGGAA
AAGATGAAGAGGATATGTCATAAATCTGGTATAGAAAAGCGCTACATCCACCTTGACGCA
GAGCTTATCAGTGTCCACCCAGAGATCATTGACAAACATTTGCCCTCCCTTGAAACTCGT
GTAGACATCGTGGCTACTGAGGTCCCCAAGCTTGCTGAGTCCGCTGCGCGGAAAGCCATT
GCTGAGTGGGGCCGTCCGGCCACTGACATCACTCACCTTATCTTCAGCACCTACTCAGGC
TGTCGTGCACCTAGTGCCGACCTCCAATTGGCTTCGTTGCTCGGACTACGCCCTTCCGTT
TCTCGCACCATTCTCAGTCTCCACGGTTGCTCAGGTGGTGGCAGGGCACTCCAACTCGCA
AAGGAGATCGCCGAGAATAACCGCGGTGCTCGTGTCCTCATAGCTTGCTCCGAGCTGACA
CTGATATGCTTCTCTACCCCAGACGAAAGCAAAATCATTGGCCATGGACTGTTCGGGGAT
GGTGCTGGCGCAGTCATCGTCGGTGCCGATCCCTCAGTCGATGGTGAGTGCCCGCTATTC
GAGATGGTTGCCGCCTCACAAACCATGATACCAGGAACCGAGCACGCGCTCGGCATGCAG
GCCACTAGTAGTGGAATAGATTTTCACCTCTCCATCCAGGTGCCGACACTGATAAAGGAC
AACATCCATCAGTGCTTGCTCAATGCGTTTCGATCTGTTGGAAACACAGATCCTAACTGG
AACGACCTCTTCTGGGCAGTGCACCCTGGCGGTCGCGCAATCCTTGATAACATAGAAGAC
AAGCTCCAACTGCATCCATGTAAGCTTGCGGCAAGCCGCCAAGTGTTGAGCGAGTACGGG
AACATGAGTGGTGCAACAATTGCATTCGTTCTTGATGAACTACGGCGCCGTCGGGAGAAG
GAACAAGACATACAGCAACAACCTGAGTGGGGAGTGTTGCTGGCCTTTGGACCTGGAGTC
ACAATAGAGTCAATCGTGCTGCGTAACCCACTCTCACGTGGTTTGAAGGAAAATTAA

Peptide Sequence

PEP ID

Os10t0158400-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:3696797:3698817:1 gene:Os10g0158400 transcript:Os10t0158400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYKETIDE SYNTHASE 16 description:Similar to Chalcone and stilbene synthases, N-terminal domain containing protein. (Os10t0158400-00)
Sequence

MPGATTAAIVDSRRGTQHSEGPATILAIGTANPENIMFQDNFADYYFGLTKSEHLTELKE
KMKRICHKSGIEKRYIHLDAELISVHPEIIDKHLPSLETRVDIVATEVPKLAESAARKAI
AEWGRPATDITHLIFSTYSGCRAPSADLQLASLLGLRPSVSRTILSLHGCSGGGRALQLA
KEIAENNRGARVLIACSELTLICFSTPDESKIIGHGLFGDGAGAVIVGADPSVDGECPLF
EMVAASQTMIPGTEHALGMQATSSGIDFHLSIQVPTLIKDNIHQCLLNAFRSVGNTDPNW
NDLFWAVHPGGRAILDNIEDKLQLHPCKLAASRQVLSEYGNMSGATIAFVLDELRRRREK
EQDIQQQPEWGVLLAFGPGVTIESIVLRNPLSRGLKEN

Transcript Sequence

Transcript ID

Os10t0158400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:3696797:3698817:1 gene:Os10g0158400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYKETIDE SYNTHASE 16 description:Similar to Chalcone and stilbene synthases, N-terminal domain containing protein. (Os10t0158400-00)
Sequence

ATGCCTGGAGCAACTACCGCCGCTATTGTTGACAGCCGCCGCGGCACACAACATTCGGAA
GGTCCTGCAACGATCCTCGCCATCGGCACTGCAAACCCGGAAAACATCATGTTTCAGGAT
AACTTTGCCGACTACTACTTTGGTCTAACCAAAAGCGAGCACCTTACCGAGCTCAAGGAA
AAGATGAAGAGGATATGTCATAAATCTGGTATAGAAAAGCGCTACATCCACCTTGACGCA
GAGCTTATCAGTGTCCACCCAGAGATCATTGACAAACATTTGCCCTCCCTTGAAACTCGT
GTAGACATCGTGGCTACTGAGGTCCCCAAGCTTGCTGAGTCCGCTGCGCGGAAAGCCATT
GCTGAGTGGGGCCGTCCGGCCACTGACATCACTCACCTTATCTTCAGCACCTACTCAGGC
TGTCGTGCACCTAGTGCCGACCTCCAATTGGCTTCGTTGCTCGGACTACGCCCTTCCGTT
TCTCGCACCATTCTCAGTCTCCACGGTTGCTCAGGTGGTGGCAGGGCACTCCAACTCGCA
AAGGAGATCGCCGAGAATAACCGCGGTGCTCGTGTCCTCATAGCTTGCTCCGAGCTGACA
CTGATATGCTTCTCTACCCCAGACGAAAGCAAAATCATTGGCCATGGACTGTTCGGGGAT
GGTGCTGGCGCAGTCATCGTCGGTGCCGATCCCTCAGTCGATGGTGAGTGCCCGCTATTC
GAGATGGTTGCCGCCTCACAAACCATGATACCAGGAACCGAGCACGCGCTCGGCATGCAG
GCCACTAGTAGTGGAATAGATTTTCACCTCTCCATCCAGGTGCCGACACTGATAAAGGAC
AACATCCATCAGTGCTTGCTCAATGCGTTTCGATCTGTTGGAAACACAGATCCTAACTGG
AACGACCTCTTCTGGGCAGTGCACCCTGGCGGTCGCGCAATCCTTGATAACATAGAAGAC
AAGCTCCAACTGCATCCATGTAAGCTTGCGGCAAGCCGCCAAGTGTTGAGCGAGTACGGG
AACATGAGTGGTGCAACAATTGCATTCGTTCTTGATGAACTACGGCGCCGTCGGGAGAAG
GAACAAGACATACAGCAACAACCTGAGTGGGGAGTGTTGCTGGCCTTTGGACCTGGAGTC
ACAATAGAGTCAATCGTGCTGCGTAACCCACTCTCACGTGGTTTGAAGGAAAATTAATCA
CCACTATGAAGAATAAAATTTAAAAGTCATCTTCTGCACT