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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0154700-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:3438474:3439397:1 gene:Os10g0154700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 18-4 description:Similar to Cyclophilin Dicyp-2. (Os10t0154700-01)
Sequence

ATGGCGCCGGCGGCGTCCTCCAAGTCCAACCCAAGGGTGTTCCTTGACATCGCCATCGGC
GGCGAGTGGGTTGGCCGCGTGGTGATCGAGCTGCTCGCCGACAAGGTGCCCGACACGGCG
GAGAACTTCCGGCGGCTGTGCACCGGCGAGCGCGCCGGGCGCTCCGGCAAGAGCAGGCTC
CACTACAAGGGGTCGGCGTTCCACCGCGTGGTGCCCGGGTTCATGTGCCAGGGCGGCGAC
ATCACGGCCGGGAACGGCACCGGCGGCGAGTCGGCGCTGGACGGCGCCGCGAGGCACTTC
CCCGACGAGGGGTTCGCGGTGAAGCACGACGGGCCCGGGGTGGTGTCCATGGCGAACGCC
GGGCCCAACACCAACGGCTCCCAGTTCTTCATCACCGTCGACAAGGCGCCGTGGCTGGAC
GGCCGCCACGTCGCGTTCGGCCGCGTCGTCGCCGGGATGGGCGCCGTCCGCGCCATCGAC
AGGACGGGAACCTGGAGCGGCAAGACGGTGAAGCCCGTCGTCATCACCGACTGCGGCGTG
CTCTAG

Peptide Sequence

PEP ID

Os10t0154700-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:3438474:3439397:1 gene:Os10g0154700 transcript:Os10t0154700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 18-4 description:Similar to Cyclophilin Dicyp-2. (Os10t0154700-01)
Sequence

MAPAASSKSNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRL
HYKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANA
GPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVKPVVITDCGV
L

Transcript Sequence

Transcript ID

Os10t0154700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:3438474:3439397:1 gene:Os10g0154700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLOPHILIN 18-4 description:Similar to Cyclophilin Dicyp-2. (Os10t0154700-01)
Sequence

AAGTCTCAAACCAAGAGACAACAAGTCACAATTTCTCATAGACAAGTAGCTATCTATCTC
TATCTAGCAAGCTAGCTAGGTTGCTTGCATTCTCTCCTCTCTCTCTTCCTGTGTCACCAA
TGGCGCCGGCGGCGTCCTCCAAGTCCAACCCAAGGGTGTTCCTTGACATCGCCATCGGCG
GCGAGTGGGTTGGCCGCGTGGTGATCGAGCTGCTCGCCGACAAGGTGCCCGACACGGCGG
AGAACTTCCGGCGGCTGTGCACCGGCGAGCGCGCCGGGCGCTCCGGCAAGAGCAGGCTCC
ACTACAAGGGGTCGGCGTTCCACCGCGTGGTGCCCGGGTTCATGTGCCAGGGCGGCGACA
TCACGGCCGGGAACGGCACCGGCGGCGAGTCGGCGCTGGACGGCGCCGCGAGGCACTTCC
CCGACGAGGGGTTCGCGGTGAAGCACGACGGGCCCGGGGTGGTGTCCATGGCGAACGCCG
GGCCCAACACCAACGGCTCCCAGTTCTTCATCACCGTCGACAAGGCGCCGTGGCTGGACG
GCCGCCACGTCGCGTTCGGCCGCGTCGTCGCCGGGATGGGCGCCGTCCGCGCCATCGACA
GGACGGGAACCTGGAGCGGCAAGACGGTGAAGCCCGTCGTCATCACCGACTGCGGCGTGC
TCTAGAAATACATATACATACGTATATATGCCAGTGTATACCGTATACGTACGTGTACCG
GTGTACGTACGTATGCTGTACGGTTCGGTATACATTAAAATTGTGTCTACTCTAGCTACT
GTGTGATGAGCGTATGAGAGTGTTAGCTGATGTAATTTTTTGAGGTTGCGACATGGTGGT
TACAAACTATCGAGGACGTTAGCTGCCTCACTGATGGTGACTTAATCTAGCTACCAGATA
ATAAAATTGAGTGATTGAGCACAT