Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0150800-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:3031619:3032661:1 gene:Os10g0150800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150800-01)
Sequence

ATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTC
GCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACC
AGGAAGAACATGAAAGCTGAGGATGCTTTCAAGAACCTCCAGGTGGCGATCAAGTGCAAG
AACGGCAATGGTGAGTACGAGAGCAAGGCCACCGGAAAGCTCGACGGTACCGGCGTCTTC
AGCATCCCCCTCGACGCCGACCTCCACAGCTCCGACTGCGTCGCACAGCTCCATGGCGCG
ACCAACGAGCCATGCCCCGGACAAGAGCCATCCAAGATCGTGCCAATGTCAGAGGGCACC
TTTATCGCCGTCGCCGGCCAGACCCACTACCCATCAGCGTTGTGCGCATCGGCGACCATC
TGCGGTCCCATCAAGAAGAAGATCATAGACCACTTCCACAAGAAGCCGGTGCCACCCAAG
CCAGAGCCAAAACCGGAGCCACCCAAGCCCAAGCCTGAGCCGGAGCACCCATTCCTCGAC
CACATCCACAAGAAGGAGAAGCACTTCTTCGATCACTTCCACAAGAAGCCCGTGCCGCCC
AAGCCAGAGCCCAAGCCGGAGCCCAAGCCAGAGCCCAAGCCGCAGCCTGCGCCTGAGTAC
CACAACCCGAGCCCTCCGGCGAAGAATTGA

Peptide Sequence

PEP ID

Os10t0150800-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:3031619:3032661:1 gene:Os10g0150800 transcript:Os10t0150800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150800-01)
Sequence

MAGAPRGLVLLGVCAVLMAVAVGGEAASVVVGTAKCADCTRKNMKAEDAFKNLQVAIKCK
NGNGEYESKATGKLDGTGVFSIPLDADLHSSDCVAQLHGATNEPCPGQEPSKIVPMSEGT
FIAVAGQTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPEPKPEPPKPKPEPEHPFLD
HIHKKEKHFFDHFHKKPVPPKPEPKPEPKPEPKPQPAPEYHNPSPPAKN

Transcript Sequence

Transcript ID

Os10t0150800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:3031619:3032661:1 gene:Os10g0150800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150800-01)
Sequence

ATCCATCTCTACACATCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATG
GCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCC
GTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGG
AAGAACATGAAAGCTGAGGATGCTTTCAAGAACCTCCAGGTGGCGATCAAGTGCAAGAAC
GGCAATGGTGAGTACGAGAGCAAGGCCACCGGAAAGCTCGACGGTACCGGCGTCTTCAGC
ATCCCCCTCGACGCCGACCTCCACAGCTCCGACTGCGTCGCACAGCTCCATGGCGCGACC
AACGAGCCATGCCCCGGACAAGAGCCATCCAAGATCGTGCCAATGTCAGAGGGCACCTTT
ATCGCCGTCGCCGGCCAGACCCACTACCCATCAGCGTTGTGCGCATCGGCGACCATCTGC
GGTCCCATCAAGAAGAAGATCATAGACCACTTCCACAAGAAGCCGGTGCCACCCAAGCCA
GAGCCAAAACCGGAGCCACCCAAGCCCAAGCCTGAGCCGGAGCACCCATTCCTCGACCAC
ATCCACAAGAAGGAGAAGCACTTCTTCGATCACTTCCACAAGAAGCCCGTGCCGCCCAAG
CCAGAGCCCAAGCCGGAGCCCAAGCCAGAGCCCAAGCCGCAGCCTGCGCCTGAGTACCAC
AACCCGAGCCCTCCGGCGAAGAATTGATGAATATGATCTGCATTGGATGGACATTAGCAT
GTTTGATCATGCCGCAGATGATGATCCTGCTCAGCACAGGAGTGTAATTTGTACTTGATT
ATCGGGCATCAGCAGGGATGTTTGTACTATTTGCATATTTTTCTCTCCCAAATGAAATTA
TATATGGTAAAATAATTTATTTACATTT