Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0150600-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:3016889:3018047:1 gene:Os10g0150600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150600-01)
Sequence

ATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGCGCCGTCCTGATGGTGCTC
GCCGTCAGTGGCGAAGCGGCGTCGGTCGTCATCGGCACGGCCAAGTGCGCCGACTGCACC
CGGAAGAACATGAAAGCCGAGGATGCTTTCAAGAATCTCCAGGTGGCGATCAAGTGCAAG
AACGGCAATGGCGAGTACGAGAGCAAGGCCGCTGGAAAGCTTGACGGCTCCGGCGCTTTC
AGCGTCCCTCTCGACACCGACCTTCACAGCTCTGACTGCATTGCCCAGCTCCACAGCGCA
ACCAACGAGCCATGCCCCGGGCAAGAGCCATCCAAGATCGTGCCATTGTCGGAGGGCACC
TTTGTCACCGTCGCTGGCAAGACCAGCTATCCGTCGGCTTTGTGTGCGTCGGCGACCATC
TGCGGCCCCATCAAGAAGAAGATCATCGACCACTTCCATAAGAAGCCGGTGCCACCGAAG
CCGGATCCCAAGCCAGAGCCGCCCAAGCCGAAGCCAGAGCCAGAGCACCCCATCCTCGAC
CACTTCCACAAGAAGGAGAAGGACTTCTTTGACCACTTCCACAAGAAGCCCGTACCACCC
AAGCCTGAGCCAAAGTCGGAACCCAAGCCACAGCCCAAGCCACAGCCAGCGCCTGAGTAC
CACAACCCTAGCCCACCAGCGAAGCACTAA

Peptide Sequence

PEP ID

Os10t0150600-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:3016889:3018047:1 gene:Os10g0150600 transcript:Os10t0150600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150600-01)
Sequence

MAGAPRGLVLLGVCAVLMVLAVSGEAASVVIGTAKCADCTRKNMKAEDAFKNLQVAIKCK
NGNGEYESKAAGKLDGSGAFSVPLDTDLHSSDCIAQLHSATNEPCPGQEPSKIVPLSEGT
FVTVAGKTSYPSALCASATICGPIKKKIIDHFHKKPVPPKPDPKPEPPKPKPEPEHPILD
HFHKKEKDFFDHFHKKPVPPKPEPKSEPKPQPKPQPAPEYHNPSPPAKH

Transcript Sequence

Transcript ID

Os10t0150600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:3016889:3018047:1 gene:Os10g0150600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150600-01)
Sequence

ATCCATTCAGAGTTAGCAAGCTCTTCTAATTCATATATAGAACTCAGAATGGCAGGTGCT
CCTCGAGGACTAGTTCTCCTCGGCGTTTGCGCCGTCCTGATGGTGCTCGCCGTCAGTGGC
GAAGCGGCGTCGGTCGTCATCGGCACGGCCAAGTGCGCCGACTGCACCCGGAAGAACATG
AAAGCCGAGGATGCTTTCAAGAATCTCCAGGTGGCGATCAAGTGCAAGAACGGCAATGGC
GAGTACGAGAGCAAGGCCGCTGGAAAGCTTGACGGCTCCGGCGCTTTCAGCGTCCCTCTC
GACACCGACCTTCACAGCTCTGACTGCATTGCCCAGCTCCACAGCGCAACCAACGAGCCA
TGCCCCGGGCAAGAGCCATCCAAGATCGTGCCATTGTCGGAGGGCACCTTTGTCACCGTC
GCTGGCAAGACCAGCTATCCGTCGGCTTTGTGTGCGTCGGCGACCATCTGCGGCCCCATC
AAGAAGAAGATCATCGACCACTTCCATAAGAAGCCGGTGCCACCGAAGCCGGATCCCAAG
CCAGAGCCGCCCAAGCCGAAGCCAGAGCCAGAGCACCCCATCCTCGACCACTTCCACAAG
AAGGAGAAGGACTTCTTTGACCACTTCCACAAGAAGCCCGTACCACCCAAGCCTGAGCCA
AAGTCGGAACCCAAGCCACAGCCCAAGCCACAGCCAGCGCCTGAGTACCACAACCCTAGC
CCACCAGCGAAGCACTAAACATTATCTACGTTTGGTCTTGTATGATTTCGTGCCATATCA
GTGTGTCCGCAGAATAACGCTTTCTACCCCCGTGTGAGATTATACATTGAAATATAATGT
ACTTGCTAGCTTTCATCCGCAGGAGTTTTTTTTTTAAAGTGTGACCGGGTTCATTTATTG
GATATCGCATGCATATTAGCAGGGCACGATGTGTACTGTAATATCTGCCTGTTGTTTTTA
TTTCTCTACCTAAATGAAGTTAACCACAAAGGACAAACATAAATTCACATG