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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0150400-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:3012860:3013949:-1 gene:Os10g0150400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150400-01)
Sequence

ATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTC
GCCGTCGGCGGAGAGGCGGCGTCGGTGGTCGTCGGCACGGCCAAGTGCGCCGACTGCACC
CGGAAGAACATGAAAGCTGAGGATGCTTTCAAGAACCTCCAGGTGGCGATTAAGTGCAAG
AACGGCAACGGCGAGTACGAGAGCAAGGCCACTGGAAAGCTCGACGGCACCGGTGCCTTC
AGCGTCCCCCTTGACGCCGACCTCCACAGCTCCGACTGCATCGCTCAGCTCCACAGCGCC
ACCAACGAGCCATGCCCCGGCCAGGAGCCATCCAAGATCGTGCCAATGTCGGAGGGCACC
TTTGCTGCCGTCGCCGGCAAGACCCACTACCGATCGGCGTTGTGCGCGTCCGTGACCATC
TGCGGCCCAATCAAGAAGAAGATCATAGACCACTTCCACAAGAAGCCGGTGCCACCCAAG
CCGGAGCCAAAGCCGGAGCCACCCAAGCCCAAGCCTGAGCCGGAGCACCCATTCCTCGAC
CACATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCCGTGCCACCC
AAGCCTGAGCCTAAGCCCGAGCCCAAGCCGCAGCCTGCGCCAGAGTACCACAACCCTAGC
CCTCCGGCGAATTAA

Peptide Sequence

PEP ID

Os10t0150400-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:3012860:3013949:-1 gene:Os10g0150400 transcript:Os10t0150400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150400-01)
Sequence

MAGAPRGLVLLGVCAVLMAVAVGGEAASVVVGTAKCADCTRKNMKAEDAFKNLQVAIKCK
NGNGEYESKATGKLDGTGAFSVPLDADLHSSDCIAQLHSATNEPCPGQEPSKIVPMSEGT
FAAVAGKTHYRSALCASVTICGPIKKKIIDHFHKKPVPPKPEPKPEPPKPKPEPEHPFLD
HIHKKEKHFFDHFHKKPVPPKPEPKPEPKPQPAPEYHNPSPPAN

Transcript Sequence

Transcript ID

Os10t0150400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:3012860:3013949:-1 gene:Os10g0150400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0150400-01)
Sequence

ATCCATCTCTACACATCAGCAATATTTAGCTACACAGAGCTATCTAGGATTAGCTGATCA
GCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCG
GTCGCCGTCGGCGGAGAGGCGGCGTCGGTGGTCGTCGGCACGGCCAAGTGCGCCGACTGC
ACCCGGAAGAACATGAAAGCTGAGGATGCTTTCAAGAACCTCCAGGTGGCGATTAAGTGC
AAGAACGGCAACGGCGAGTACGAGAGCAAGGCCACTGGAAAGCTCGACGGCACCGGTGCC
TTCAGCGTCCCCCTTGACGCCGACCTCCACAGCTCCGACTGCATCGCTCAGCTCCACAGC
GCCACCAACGAGCCATGCCCCGGCCAGGAGCCATCCAAGATCGTGCCAATGTCGGAGGGC
ACCTTTGCTGCCGTCGCCGGCAAGACCCACTACCGATCGGCGTTGTGCGCGTCCGTGACC
ATCTGCGGCCCAATCAAGAAGAAGATCATAGACCACTTCCACAAGAAGCCGGTGCCACCC
AAGCCGGAGCCAAAGCCGGAGCCACCCAAGCCCAAGCCTGAGCCGGAGCACCCATTCCTC
GACCACATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCCGTGCCA
CCCAAGCCTGAGCCTAAGCCCGAGCCCAAGCCGCAGCCTGCGCCAGAGTACCACAACCCT
AGCCCTCCGGCGAATTAAGCAATGGAAGTTTGCATGCATGCATGGTTCGTTTGGTTAGTA
CGTTTGGTGTTGTTGCATATGATTTCCTGTCATGTCAGTTTGTCTGCAGAATAATGGTTT
TCTTTGATGCATTAGCTTTTACTCACAAGTTTAATTTGTGTGTGTGTGTCTATTTGTTTG
GTATCAGCAAGTAATTAATATAATCAGGGATGTGCATAATATATGTGCAACTTGTTTGAT
CTCAATTGTAAGGTAC