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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0149800-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:2981620:2982619:-1 gene:Os10g0149800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0149800-00)
Sequence

ATGGCAGCTGTAGCACGAGCACTAGTCCTCGGCGCCGTCGTCGTCTGCGCCGCCCTCGTG
ATGGCTGTCACCGCCGCTGCGGACGGCGAGGCGGCGGTGGCGCTCGTCGTCGGCTTGGCC
AAGTGCGGCGGCTGCTCCAGGAAGAACATCAAGGCGCAGGATGCTTTCAAGGGTCTCCAG
GTGGCGATCAAGTGCAAGAACAGCGACGGCGAGTACGAGAGCAAGGCCGTCGGCGACCTC
GACGGCGACGGCGCCTTCAGCGTGCCCCTCGCCGCCGACGACCTCCACGGCGCCGCCGGC
TGCTTCGCGCAGCTGCACAGCGCGGCGAGCAGCGCGCCGTGCCCCGGGCAGGAGCCGTCC
AAGATCGTGCCGCTGCCATCAACGACGGACAACGGCGGCAATAAGGCTAACACCTTCGTC
GCCGTCGCCGGCAAGAGGATGCACTACTCGTCGTCGGCGGAGTGCACCTCGGCGTTCCTG
TGCCCCTTCTTCGACTATTTCTACAACAGACCCCAAGGCCCCAAGCCGACGCCGGCGAAC
GGTGGTGGCGCGGCAAACGGTGGCGGAGCTGCGGCGCCGGCTCCCAGCCCTCCGGCCGGC
ATATCACAGCTGAATTTTTAA

Peptide Sequence

PEP ID

Os10t0149800-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:2981620:2982619:-1 gene:Os10g0149800 transcript:Os10t0149800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0149800-00)
Sequence

MAAVARALVLGAVVVCAALVMAVTAAADGEAAVALVVGLAKCGGCSRKNIKAQDAFKGLQ
VAIKCKNSDGEYESKAVGDLDGDGAFSVPLAADDLHGAAGCFAQLHSAASSAPCPGQEPS
KIVPLPSTTDNGGNKANTFVAVAGKRMHYSSSAECTSAFLCPFFDYFYNRPQGPKPTPAN
GGGAANGGGAAAPAPSPPAGISQLNF

Transcript Sequence

Transcript ID

Os10t0149800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:2981620:2982619:-1 gene:Os10g0149800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1210 family protein. (Os10t0149800-00)
Sequence

TAAGATACTCCAAATATCAAGGAGGAGTTTGCTAGGATTCATTCAGCAATGGCAGCTGTA
GCACGAGCACTAGTCCTCGGCGCCGTCGTCGTCTGCGCCGCCCTCGTGATGGCTGTCACC
GCCGCTGCGGACGGCGAGGCGGCGGTGGCGCTCGTCGTCGGCTTGGCCAAGTGCGGCGGC
TGCTCCAGGAAGAACATCAAGGCGCAGGATGCTTTCAAGGGTCTCCAGGTGGCGATCAAG
TGCAAGAACAGCGACGGCGAGTACGAGAGCAAGGCCGTCGGCGACCTCGACGGCGACGGC
GCCTTCAGCGTGCCCCTCGCCGCCGACGACCTCCACGGCGCCGCCGGCTGCTTCGCGCAG
CTGCACAGCGCGGCGAGCAGCGCGCCGTGCCCCGGGCAGGAGCCGTCCAAGATCGTGCCG
CTGCCATCAACGACGGACAACGGCGGCAATAAGGCTAACACCTTCGTCGCCGTCGCCGGC
AAGAGGATGCACTACTCGTCGTCGGCGGAGTGCACCTCGGCGTTCCTGTGCCCCTTCTTC
GACTATTTCTACAACAGACCCCAAGGCCCCAAGCCGACGCCGGCGAACGGTGGTGGCGCG
GCAAACGGTGGCGGAGCTGCGGCGCCGGCTCCCAGCCCTCCGGCCGGCATATCACAGCTG
AATTTTTAATTCATCCATTCCATCAATATCCACACTTGCTTTTTTGTTTGATTTCATGGC
TTGGTTAATCCTTTTGGTTCTTGCATGATTAATTTCCAGGTCAGCTTGTTGGTGCAGAAT
AATAAAAGTTGTGAGATGTGAGAGGAGAGTGTGACTGTGTGAGATCGATCGATCGATGTG
TGTGAGAATAAAATTAAGTTCGTGCAGAAGTGCTTGTGTAGTACCTCCATTTATTGGCAT
ATCT