Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0149400-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:2966920:2967640:-1 gene:Os10g0149400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to proline-rich protein. (Os10t0149400-00)
Sequence

ATGGCAGTTGCCGCTGCTGCGGACGGCGAGGTGGCGGCGGTCGTCGTCGGTCAGGCCAAG
TGCGGCGAGTGCACCAGGAAGAACATGATGGCGCAGGATGCTTTCAAGGGTCTCCAGGTG
GCGATCAAGTGCAAGAACAGCGATGGCGAGTACGAGAGCAAGGCCGTCGGCGACCTCGAC
GGCGACGGCGCCTTCAGCGTGCCCCTCGCCGCCGACGACCTCCACGGCGCCGCCGACTGC
TTCGCGCAGCTGCACAGCGCGACGAGCAGCACGCCGTGCCCCGGGCAGGAGCCGTCCAAG
ATCGTACCGCTGTCGTCAACAACGGACAACGGCGGCGACAAGGCTAACACCTTCGTCGTC
GTCGCTGGCAAGAGGATGCACTCCTCCACATCGCCGGCGGAGTGCACGTCGGCGTTCCTG
TACGACTACTTCCACAAGCACCCCTTCTTCGACTATTTCCACAAGAAACCCCAAGGCCCC
GAACCCAAGCCGGATCCCAAGCCAACGCCATTGCCGGCGAACGGTGGTGGTGGCGGTGCG
GGAAACGGTGGTGGCGGCGCCCAGGGGAACAGTGGCGGAGCTGCGCCGTCTCCCAGCTCT
CCGCCGGTCTACCACTGA

Peptide Sequence

PEP ID

Os10t0149400-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:2966920:2967640:-1 gene:Os10g0149400 transcript:Os10t0149400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to proline-rich protein. (Os10t0149400-00)
Sequence

MAVAAAADGEVAAVVVGQAKCGECTRKNMMAQDAFKGLQVAIKCKNSDGEYESKAVGDLD
GDGAFSVPLAADDLHGAADCFAQLHSATSSTPCPGQEPSKIVPLSSTTDNGGDKANTFVV
VAGKRMHSSTSPAECTSAFLYDYFHKHPFFDYFHKKPQGPEPKPDPKPTPLPANGGGGGA
GNGGGGAQGNSGGAAPSPSSPPVYH

Transcript Sequence

Transcript ID

Os10t0149400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:2966920:2967640:-1 gene:Os10g0149400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to proline-rich protein. (Os10t0149400-00)
Sequence

ATGGCAGTTGCCGCTGCTGCGGACGGCGAGGTGGCGGCGGTCGTCGTCGGTCAGGCCAAG
TGCGGCGAGTGCACCAGGAAGAACATGATGGCGCAGGATGCTTTCAAGGGTCTCCAGGTG
GCGATCAAGTGCAAGAACAGCGATGGCGAGTACGAGAGCAAGGCCGTCGGCGACCTCGAC
GGCGACGGCGCCTTCAGCGTGCCCCTCGCCGCCGACGACCTCCACGGCGCCGCCGACTGC
TTCGCGCAGCTGCACAGCGCGACGAGCAGCACGCCGTGCCCCGGGCAGGAGCCGTCCAAG
ATCGTACCGCTGTCGTCAACAACGGACAACGGCGGCGACAAGGCTAACACCTTCGTCGTC
GTCGCTGGCAAGAGGATGCACTCCTCCACATCGCCGGCGGAGTGCACGTCGGCGTTCCTG
TACGACTACTTCCACAAGCACCCCTTCTTCGACTATTTCCACAAGAAACCCCAAGGCCCC
GAACCCAAGCCGGATCCCAAGCCAACGCCATTGCCGGCGAACGGTGGTGGTGGCGGTGCG
GGAAACGGTGGTGGCGGCGCCCAGGGGAACAGTGGCGGAGCTGCGCCGTCTCCCAGCTCT
CCGCCGGTCTACCACTGA