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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0148000-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:2885469:2886579:1 gene:Os10g0148000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d11, lipid transfer protein d11, type D non-specific lipid transfer protein 11, Drought-Induced LTP, Drought-Induced lipid transfer protein description:Hypothetical conserved gene. (Os10t0148000-01);Lipid transfer protein, Drought tolerance (Os10t0148000-02)
Sequence

ATGTCTCAGCTCAAGTCTTCTAGCCTGGCTGCACTGCTGATCTTCCTCCTGGCAGTGTTC
ACCACTGCAGCAGCAGCGGCAGGTACAGAATGCCAGAACGATGTCGAGGTGCTGAAGACA
ACCTGCTACAAGTTCGTTGAGAAGGACGGGCCGAAGCTGCAGCCATCACCTGACTGCTGC
ACCTCCATGAAGGGCGTCAACGTGCCCTGCGTCTGCACCTACCTGGGCAGCCCAGGCGTC
AGGGACAACATCAACATGGATAAGGTGTTCTATGTCACCAAGCAGTGTGGCATCGCCATC
CCCGGGAACTGCGGAGGTGAGCAGGCTTCACTTGATTGGCCACACTGA

Peptide Sequence

PEP ID

Os10t0148000-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:2885469:2886579:1 gene:Os10g0148000 transcript:Os10t0148000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d11, lipid transfer protein d11, type D non-specific lipid transfer protein 11, Drought-Induced LTP, Drought-Induced lipid transfer protein description:Hypothetical conserved gene. (Os10t0148000-01);Lipid transfer protein, Drought tolerance (Os10t0148000-02)
Sequence

MSQLKSSSLAALLIFLLAVFTTAAAAAGTECQNDVEVLKTTCYKFVEKDGPKLQPSPDCC
TSMKGVNVPCVCTYLGSPGVRDNINMDKVFYVTKQCGIAIPGNCGGEQASLDWPH

Transcript Sequence

Transcript ID

Os10t0148000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:2885469:2886579:1 gene:Os10g0148000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:non-specific lipid transfer protein d11, lipid transfer protein d11, type D non-specific lipid transfer protein 11, Drought-Induced LTP, Drought-Induced lipid transfer protein description:Hypothetical conserved gene. (Os10t0148000-01);Lipid transfer protein, Drought tolerance (Os10t0148000-02)
Sequence

TTAATCAGAGAAGTTCAAGATATCAGAAAGAACAACACATACCAGGATGTCTCAGCTCAA
GTCTTCTAGCCTGGCTGCACTGCTGATCTTCCTCCTGGCAGTGTTCACCACTGCAGCAGC
AGCGGCAGGTACAGAATGCCAGAACGATGTCGAGGTGCTGAAGACAACCTGCTACAAGTT
CGTTGAGAAGGACGGGCCGAAGCTGCAGCCATCACCTGACTGCTGCACCTCCATGAAGGG
CGTCAACGTGCCCTGCGTCTGCACCTACCTGGGCAGCCCAGGCGTCAGGGACAACATCAA
CATGGATAAGGTGTTCTATGTCACCAAGCAGTGTGGCATCGCCATCCCCGGGAACTGCGG
AGGTGAGCAGGCTTCACTTGATTGGCCACACTGATCACCTGGGTAAGAACTGACAATAAC
ACGCCGGCTCCTCTGGATTGCGACTTCCAGTGGGGCCCAGGTGTCGGTGTCAGCTGGGAT
CCAAGGTCTAAAACAAGAACTGATTGACTTGGTGAAGTTGGCTGACAAAAGCAAGGCACC
TAGCAGTTGCACGGCTGATATAGGTAAATAATGTTGGTCAACTTTTAGAGTACACGGATT
GTACGTCAACCTTCAGCATGTTGTGATAACAAAATATGTATCAATGATGGTTGTCTATAT
ACACTGAAAATGCAAGAGTATTTTTAAATCACATGTTGTATTGAGTATTGACCCAGCTAT
CAACTGTTTGTTGATGTGCCCTGTTCCTTAGTCTGATAAATGCTAATATAGCACATTGCT
AAAAGC