Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0145200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:2743360:2748402:-1 gene:Os10g0145200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 537 description:Cyclin-like F-box domain containing protein. (Os10t0145200-01)
Sequence	ATGAGCGAGGCGACCGCCGGCCACTCCTCCGCGGCGGCGGCGGAGTCTGCACCGGACGAC GTCATCGCGGAGATACTCCTCCGCCTCCCGCCCCACCCTTCCTTCCTCTCCCGCGCCTCC CTCGTCTGCAACCGCTGGCGCCGCCTGGCCCGCGACCCGGGCTTCCTCCGCCGCTTGCGC GCATTCCATCGAACACCCCCCGTGCTCGGCTTCTTCCACAACTCCCCGGACCTCCCCCGC TTCGTCCCCGCCGAGGGCGTCCCCGGCCGCGTCGCCGCCGAGGCCGCCTCCCTCAGGAGG GACGGGGATGACGGCATGTGGTGGTGCGTCGACTGCCGCCACGGCCGCGCCCTCCTCCGC AGCCGCGACTGGGCCGAGTTGCTCGTCTGGGACCCCATGACCGGGGAGCGCCGCTGCATC ACCGTCTCCAGCCAGATCCAGGAGGGGGCCCTCGACCTCAACGCCGCCGTGTTCTGCGCT GCCTCCGGCGGCGGTGACCAAGACTGCCACTCTAGTCCCTTCCATGTCGTCGTCGTGTTC ACCACCGGCCAATGCCATGGCCGCGTGTTCGCCTGCGTGTACTCTTCGGGGATCGACGCG TGGGGGGACCCGATCTCGACGCCGGTGACATCACCATGTGAGCTCTATGAGGAGCCCCCT GTTCTTGTTGGGGAAGCTCTGTATTGGCTTCTTGATGGGAGCCGTATACTTGAGTTCGAA TTCGGCAACCAATGTTTATGTTTAGCTCTGATTGATCATCCTGTGGAGAATCATGCCATC CTCAAGCGGAACATCCGTCTTGTGAGGATGGAAGACGATGATGTGCTTGGCCTTGCTTTC GTCAAGGATTTCAGCCTGCACTTGTGGGCGCGGGAGGTTGCCGATGATGGTGCGTCGCAA TGGATTCCGCGCAGAGCCATTGAGCTGGACATGATCCTGCCGCTGGAGGGCTATCGGTGC CGTGCGATGCCTATTTGGATATGTGGATTTGCTGAAGATGGAGATGTGGTGTTTATACGG ACTGTTGCTGGAGTTTTCCTGGTTTGGCTTGATACATTGAAATTCAAGAAGGTGTCTGGC TCCTTACTCATGAAGACTGTTTACTCCTATGCTAGCTTTTATGTTCCAAATGGATAA

Peptide Sequence

PEP ID	Os10t0145200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:2743360:2748402:-1 gene:Os10g0145200 transcript:Os10t0145200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 537 description:Cyclin-like F-box domain containing protein. (Os10t0145200-01)
Sequence	MSEATAGHSSAAAAESAPDDVIAEILLRLPPHPSFLSRASLVCNRWRRLARDPGFLRRLR AFHRTPPVLGFFHNSPDLPRFVPAEGVPGRVAAEAASLRRDGDDGMWWCVDCRHGRALLR SRDWAELLVWDPMTGERRCITVSSQIQEGALDLNAAVFCAASGGGDQDCHSSPFHVVVVF TTGQCHGRVFACVYSSGIDAWGDPISTPVTSPCELYEEPPVLVGEALYWLLDGSRILEFE FGNQCLCLALIDHPVENHAILKRNIRLVRMEDDDVLGLAFVKDFSLHLWAREVADDGASQ WIPRRAIELDMILPLEGYRCRAMPIWICGFAEDGDVVFIRTVAGVFLVWLDTLKFKKVSG SLLMKTVYSYASFYVPNG

Transcript Sequence

Transcript ID	Os10t0145200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:2743360:2748402:-1 gene:Os10g0145200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 537 description:Cyclin-like F-box domain containing protein. (Os10t0145200-01)
Sequence	ATCCATCCTCTGTTGAGATTTTAGAAGTGAAGTCCGCGGCCATGAGCGAGGCGACCGCCG GCCACTCCTCCGCGGCGGCGGCGGAGTCTGCACCGGACGACGTCATCGCGGAGATACTCC TCCGCCTCCCGCCCCACCCTTCCTTCCTCTCCCGCGCCTCCCTCGTCTGCAACCGCTGGC GCCGCCTGGCCCGCGACCCGGGCTTCCTCCGCCGCTTGCGCGCATTCCATCGAACACCCC CCGTGCTCGGCTTCTTCCACAACTCCCCGGACCTCCCCCGCTTCGTCCCCGCCGAGGGCG TCCCCGGCCGCGTCGCCGCCGAGGCCGCCTCCCTCAGGAGGGACGGGGATGACGGCATGT GGTGGTGCGTCGACTGCCGCCACGGCCGCGCCCTCCTCCGCAGCCGCGACTGGGCCGAGT TGCTCGTCTGGGACCCCATGACCGGGGAGCGCCGCTGCATCACCGTCTCCAGCCAGATCC AGGAGGGGGCCCTCGACCTCAACGCCGCCGTGTTCTGCGCTGCCTCCGGCGGCGGTGACC AAGACTGCCACTCTAGTCCCTTCCATGTCGTCGTCGTGTTCACCACCGGCCAATGCCATG GCCGCGTGTTCGCCTGCGTGTACTCTTCGGGGATCGACGCGTGGGGGGACCCGATCTCGA CGCCGGTGACATCACCATGTGAGCTCTATGAGGAGCCCCCTGTTCTTGTTGGGGAAGCTC TGTATTGGCTTCTTGATGGGAGCCGTATACTTGAGTTCGAATTCGGCAACCAATGTTTAT GTTTAGCTCTGATTGATCATCCTGTGGAGAATCATGCCATCCTCAAGCGGAACATCCGTC TTGTGAGGATGGAAGACGATGATGTGCTTGGCCTTGCTTTCGTCAAGGATTTCAGCCTGC ACTTGTGGGCGCGGGAGGTTGCCGATGATGGTGCGTCGCAATGGATTCCGCGCAGAGCCA TTGAGCTGGACATGATCCTGCCGCTGGAGGGCTATCGGTGCCGTGCGATGCCTATTTGGA TATGTGGATTTGCTGAAGATGGAGATGTGGTGTTTATACGGACTGTTGCTGGAGTTTTCC TGGTTTGGCTTGATACATTGAAATTCAAGAAGGTGTCTGGCTCCTTACTCATGAAGACTG TTTACTCCTATGCTAGCTTTTATGTTCCAAATGGATAATGACGGAAATTTCCACAGAAGC CCATGACATCCCATGTGTTGATAGAAGCAAGGAACTACTGACATTTTCAAGCAGATGATG GTGCAAATCATGGAATCGGATGGCTTTAGAATCTCTTGGCTGCAGTGGTGTTGAAGGATC AGTTATGCATCTGCGCTGCTTTCTCCTGATTGCAGAGGGTGTTGAAGGATCACTCCATGT TTCAATGAAAAGGTTAAAGTGGCATTTTGTTGTCGTTGGAGATAACAGCTACTAATACTC CAACGCATATCAGATTACTCCATAATTCAATAAAAAGGCGAAATTGACATTTTCTCGCCT TTGGAGATT