Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0145100-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:2740391:2741808:-1 gene:Os10g0145100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 536 description:Cyclin-like F-box domain containing protein. (Os10t0145100-01);Hypothetical conserved gene. (Os10t0145100-02)
Sequence	ATGAGCGCGGCGGCGGAGGCGGAGGCGGCGGCGGTGGAGTCGTTACCGGACGACGTGGTC GCCGAGATCCTCCTCTGCCTCCCGCCTCACCCTTCCTTCGTCTCCGGCGCCTCCCTCGTC TGCAAGCGCTGGCTCCACCTCATCCGCAGCCCCAGCTTCCTCCGCCGCGTGTGCGCATTC CATCGAACACCCCCCGTGCTCGGCTTCTTCCACAACTACCGGGACCTCCCCAGCTTCGTC CCCGCCGAGGGCGTCCCCGGCCGCAACCGCATGGACGGAGTCGACGACGGCGGCGACGCG CGGATGTTCATCGACTGCCGCCACGGCCGCGCCCTCCTCCGCCGATACGACTGGGCCGAC CTGGTCGTGTGGGACCCCATGACCGGGGAGCGCCGCCGCATCGCCGGCCCCAACCAGAAG ATGCAGGGCGGCGGCGCCGGCACCTCCCGCCGCAGCGCCGCGTTGTTCTGCAGCTGCGAT GTTTCCGGAGGCGGCGGCGACCAAGACTGCCACTCTAGCCCCTTCCATGTCGTCGTCGTG TTCACCGGTGGCTGCCGCGCGTTCGCCTGCGTGTACTCTTCGCTGACCGACGCGTGGGGC GACCTGATCTCAACGCCGGCGCCATTGCCATGTGAGCTCTGTGACACGCCCCCTGCCCTG GTTGGGGAAGCCTCGTATTGGCTTTCTTATGGGGGACTCATACTTGAGTTCCAATTTGGC AGCCAAAGTTTAACTCTGATGAAACGGCCATTGGAGATGCTTGCCGATGTACGTCTTGTG AGGTTGGAAGAAGATGGGCTTGGTCTTGCCTTCATCAAGGATTCCACCTTGCACTTGTGG GCGCGGGAGGTTGCCGATGATGGTGCGCCGAAATGGAAATGGATACCGCGCAGGGCCATT GAGCTTGACAAGTTCCTGCCGATGCCAAGGGTGCTCACCGGAAAATGGTGTGGTGAAATG TTTGTTTCGATTAGTGGGTTCTCTGAGGATGGAAATGTGGTGTTTATACGGACCCTTGCC GGCGTTTTCCTTGTTTGGCTTGAAGCATTGAAGTTCAAGAAGATGTCTGACCCCTTATAC ATGATGACTGTTCACCCATATTCAAGCTTTTATGTCCCAAATGGTATGGGAAGTTCTCTC TCTTTCTTTATCCTCTGCTGTTTAGTATTGTTTTTAGCTAATGAAAAGATTTCCAGTGTC TTTCTTTTGGTGCTGAACCCAGTATTATGTGTCTCATTGTGGTTTAGGAGTGAAAGCAAA TAG

Peptide Sequence

PEP ID	Os10t0145100-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:2740391:2741808:-1 gene:Os10g0145100 transcript:Os10t0145100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 536 description:Cyclin-like F-box domain containing protein. (Os10t0145100-01);Hypothetical conserved gene. (Os10t0145100-02)
Sequence	MSAAAEAEAAAVESLPDDVVAEILLCLPPHPSFVSGASLVCKRWLHLIRSPSFLRRVCAF HRTPPVLGFFHNYRDLPSFVPAEGVPGRNRMDGVDDGGDARMFIDCRHGRALLRRYDWAD LVVWDPMTGERRRIAGPNQKMQGGGAGTSRRSAALFCSCDVSGGGGDQDCHSSPFHVVVV FTGGCRAFACVYSSLTDAWGDLISTPAPLPCELCDTPPALVGEASYWLSYGGLILEFQFG SQSLTLMKRPLEMLADVRLVRLEEDGLGLAFIKDSTLHLWAREVADDGAPKWKWIPRRAI ELDKFLPMPRVLTGKWCGEMFVSISGFSEDGNVVFIRTLAGVFLVWLEALKFKKMSDPLY MMTVHPYSSFYVPNGMGSSLSFFILCCLVLFLANEKISSVFLLVLNPVLCVSLWFRSESK

Transcript Sequence

Transcript ID	Os10t0145100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:2740391:2741808:-1 gene:Os10g0145100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 536 description:Cyclin-like F-box domain containing protein. (Os10t0145100-01);Hypothetical conserved gene. (Os10t0145100-02)
Sequence	CCAATCCACACGACATGAGCGCGGCGGCGGAGGCGGAGGCGGCGGCGGTGGAGTCGTTAC CGGACGACGTGGTCGCCGAGATCCTCCTCTGCCTCCCGCCTCACCCTTCCTTCGTCTCCG GCGCCTCCCTCGTCTGCAAGCGCTGGCTCCACCTCATCCGCAGCCCCAGCTTCCTCCGCC GCGTGTGCGCATTCCATCGAACACCCCCCGTGCTCGGCTTCTTCCACAACTACCGGGACC TCCCCAGCTTCGTCCCCGCCGAGGGCGTCCCCGGCCGCAACCGCATGGACGGAGTCGACG ACGGCGGCGACGCGCGGATGTTCATCGACTGCCGCCACGGCCGCGCCCTCCTCCGCCGAT ACGACTGGGCCGACCTGGTCGTGTGGGACCCCATGACCGGGGAGCGCCGCCGCATCGCCG GCCCCAACCAGAAGATGCAGGGCGGCGGCGCCGGCACCTCCCGCCGCAGCGCCGCGTTGT TCTGCAGCTGCGATGTTTCCGGAGGCGGCGGCGACCAAGACTGCCACTCTAGCCCCTTCC ATGTCGTCGTCGTGTTCACCGGTGGCTGCCGCGCGTTCGCCTGCGTGTACTCTTCGCTGA CCGACGCGTGGGGCGACCTGATCTCAACGCCGGCGCCATTGCCATGTGAGCTCTGTGACA CGCCCCCTGCCCTGGTTGGGGAAGCCTCGTATTGGCTTTCTTATGGGGGACTCATACTTG AGTTCCAATTTGGCAGCCAAAGTTTAACTCTGATGAAACGGCCATTGGAGATGCTTGCCG ATGTACGTCTTGTGAGGTTGGAAGAAGATGGGCTTGGTCTTGCCTTCATCAAGGATTCCA CCTTGCACTTGTGGGCGCGGGAGGTTGCCGATGATGGTGCGCCGAAATGGAAATGGATAC CGCGCAGGGCCATTGAGCTTGACAAGTTCCTGCCGATGCCAAGGGTGCTCACCGGAAAAT GGTGTGGTGAAATGTTTGTTTCGATTAGTGGGTTCTCTGAGGATGGAAATGTGGTGTTTA TACGGACCCTTGCCGGCGTTTTCCTTGTTTGGCTTGAAGCATTGAAGTTCAAGAAGATGT CTGACCCCTTATACATGATGACTGTTCACCCATATTCAAGCTTTTATGTCCCAAATGGTA TGGGAAGTTCTCTCTCTTTCTTTATCCTCTGCTGTTTAGTATTGTTTTTAGCTAATGAAA AGATTTCCAGTGTCTTTCTTTTGGTGCTGAACCCAGTATTATGTGTCTCATTGTGGTTTA GGAGTGAAAGCAAATAGAGTATACAATAGACCAAACTTTTCCAAGTCACTTTCATTTTAT GGCTTGTTGAGCTGATGTTCAATAGTCAGCATTACCACTATGGTTGGAAGTGGATTGATT CTACTTGCGCCAATTTCAATAATATATCATTTATGATT