Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0140200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:2477209:2489739:1 gene:Os10g0140200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 38 domain containing protein. (Os10t0140200-01)
Sequence	ATGGCGTCGTCGTCGTCGGCGCTGGTGGTGGTGGTGGCGGTTCTTGCGTTGGCGGAGGCG GCGGTGGCGTTCTCGGGGTACAACACGAGCGCCGGGGCGGTGGCCGGGAAGCTGAACGTG CACCTGGTGCCGCACTCCCACGACGACGTCGGGTGGCTCAAGACCATCGACCAGTACTTC GTCGGCACCAACAACTCCATCCAGGGCGCGTGCGTGATGAACACGCTCGACTCCGTGGTG GACGCGCTCATCCTGGACCCCGCGCGCAAGTTCGTCTTCGCAGAGCAGGCTTTCTTCCAA AGATGGTGGGCAGAGAAAAGCCCAAAAATCCAGGCCATAGTCCACAAGCTAGTTGATTCT GGTCAGCTAGAGTTCATAAATGGTGGGTGGTGTATGCATGATGAAGCCGCCGTCCATTAT ATTGACATGATTGATCAGACCACACTTGGTCATCGGGTAATCAAGAAACAGTTTAACAAG ATCCCAAGAGCTGGCTGGCAAATTGATCCTTTTGGTCATTCTGCAGTTCAAGGTTATTTG CTTGGGGCAGAGCTTGGTTTCGATTCTATGCATTTTGCGAGAATCGATTACCAAGATAGA GCAAAGCGTAAAGGAGACAAAGGCCTAGAGGTTATATGGCGCGGCTCAAGAACATTTGGT TCATCTTCTCAGATCTTCACAAATGCATTTCCTGTCCATTATAGCCCTCCAGATGGCTTC GGCTTCGAAATTTTCGATGATTTTGTACCTGTACAGGATGACATGTTGCTGTTTGACTAC AATCTTAAAGAACGTGTGAATGATTTTGTTGCTGCAGCCTTAAAACAGGCAAATGTTACG CGCACAAACCACATAATGTGGACTATGGGGGACGATTTTAATTACCAGTATGCTGAGTCT TGGTTCCGGAACATGGACAGGCTTATCAATTATGTGAACAAGGATGGCCGTGTGCATGCA CTGTACTCTACTCCATCTATTTACACAGATGCAAAACATGCGTCGAATGAATCATGGCCA CTCAAATACGATGATTATTTCCCGTATGCTGATGCAAAAAATGCTTACTGGACTGGATAT TTTACAAGCCGTCCAACTTTCAAGCGATATATTCGAATGATCAGTGGATATTACCTGGCT GCGCGTCAATTGGAATTTTTGGTGGGTAGAAGTTCCTTAGGATTGTTTACTTCTAGCTTG GAAGATCCACTGGGGATTGCCCAACATCATGATGCAGTCTCAGGAACGGCAAAGCAACAC ACAACTGATGATTATTCGAAACGCCTTGCGATTGGGGTTTCTCAGGTTGAGAAAGGTGTT AATACTGCTCTAAGTTGTCTCACAAGTTCCAAAGGAACATGTACAGCAACAAAATTTAGT CAGTGCCAACTTCTCAATATTAGCTACTGCCCTTCAACTGAGGAAGGAATTTCATCCGCA AAGAGTTTAGTTATAGTTGTTTATAATCCTCTTGGATGGGAACGTAGTGACTTTGTAAGA GTTCCAGTAAATGATGCCAACTTAATTGTAAAAACCTCTGATGGAACTTCTCTGGAGTCA CAACTAGTTGAAGTTGATATCGTGACAGCACGTTTAAGGAAGTTATACATAAAGGCTTAT CTTGGAATCACGTCCGATAAACCCCCAAAGTATTGGCTAGTTTTTCAAGCTTCTGTACCA CCACTCGGCTGGAACACCTACTTCATATCAAAATCTACTGGAACAGGATCTAATGGAATG GGGTATGTCTCAACCATGGTTTCTCCAAGTAATGACACAATAGAAATTGGACCAGGGCCT CTGAAGATGTCCTATTCATCAAAATCTGGACAACTCAAGAGAATGTTCAATTCTATCTCT GCAGTGGATTTGCCAATTCAACAGAGCTTTCTTTGGTATGCTTCAAGCACGGGAGATTCT GAAGATTCACAGGCATCCGGAGCATATATTTTCAGACCAAATAGGACTACACCGACTATA GTTTCAGGAATGGCGCCATTGAAAGTTATCCATGGACCTCTTGTTGACGAAGTCCACCAA CAGTTCAGCTCATGGATTTATCAGGTCACGAGACTCTACAAGAATAAGGAGCACGCTGAA GTTGAATATACTATTGGACCAATACCTGTTGATGATGATGATGACATAGGAAAGGAGGTT GTTACCAGACTGACAACAAATATGGCCACCAACAAAATATTTTATACAGATTCTAATGGA AGAGATTTCCTCGAAAGGGTGAGAAACCACAGGGATGATTGGGACCTTAATTTGTCTCAA CCTGTTGCAGGAAATTACTACCCGGTCAATCAAGGAATATATGTAGCAGATGGGAAATAT GAACTATCTGTCCTTGTGGATCATGCTGTTGGAGCTTCGAGTATTCAAGATGGTCAGATT GAAGTTATGCTCCACAGGCGTCTTTCTGCAGACGATGGCAGAGGAGTTGGGGAACCACTT AATGAAGTAGTATGTGTGGATCAAAAGTGCGATGGGCTAGTGGCCAGGGCAACTTACTAT ATCAATGTCAATAAGAAAGGACATGGAGCTCATTGGCGCCGAACATATAGCCAACAAGTT TATTCACCGTTCCTTGTTGCTTTTGCACATGAGGACGAACGCAGTTGGAAATCCAACAAT ATTGCAAAAGCAAGTACGGTAGAAGGAAACTATAGTCTTCCTGATAATGTTGCAATCATC ACCTTGCAGAGTCTTGATGATGGCACCACACTCCTTCGATTGGCGCATCTTTTTCAGGCT CAAGAGGACACACAATATTCAGTAATGGCAAAGGTTGAATTGAGAAAGCTGTTTGGAAAG AGGATAATCAAAGATTTGACTGAGACTAGCCTATCTGCAAACCAAAAGAAGTCAGAGATG AAGAAGCTCAATTGGAGAGTAACCGGGGAGAGCAAAACTGATCCTGCACCATTGAAGGGT GGCCCAGTTGACAGCCACGCCCTTGTTGTTGAGCTTGGACCGATGGAGATACGCACATTC TTGCTGAAATTCTGA

Peptide Sequence

PEP ID	Os10t0140200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:2477209:2489739:1 gene:Os10g0140200 transcript:Os10t0140200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 38 domain containing protein. (Os10t0140200-01)
Sequence	MASSSSALVVVVAVLALAEAAVAFSGYNTSAGAVAGKLNVHLVPHSHDDVGWLKTIDQYF VGTNNSIQGACVMNTLDSVVDALILDPARKFVFAEQAFFQRWWAEKSPKIQAIVHKLVDS GQLEFINGGWCMHDEAAVHYIDMIDQTTLGHRVIKKQFNKIPRAGWQIDPFGHSAVQGYL LGAELGFDSMHFARIDYQDRAKRKGDKGLEVIWRGSRTFGSSSQIFTNAFPVHYSPPDGF GFEIFDDFVPVQDDMLLFDYNLKERVNDFVAAALKQANVTRTNHIMWTMGDDFNYQYAES WFRNMDRLINYVNKDGRVHALYSTPSIYTDAKHASNESWPLKYDDYFPYADAKNAYWTGY FTSRPTFKRYIRMISGYYLAARQLEFLVGRSSLGLFTSSLEDPLGIAQHHDAVSGTAKQH TTDDYSKRLAIGVSQVEKGVNTALSCLTSSKGTCTATKFSQCQLLNISYCPSTEEGISSA KSLVIVVYNPLGWERSDFVRVPVNDANLIVKTSDGTSLESQLVEVDIVTARLRKLYIKAY LGITSDKPPKYWLVFQASVPPLGWNTYFISKSTGTGSNGMGYVSTMVSPSNDTIEIGPGP LKMSYSSKSGQLKRMFNSISAVDLPIQQSFLWYASSTGDSEDSQASGAYIFRPNRTTPTI VSGMAPLKVIHGPLVDEVHQQFSSWIYQVTRLYKNKEHAEVEYTIGPIPVDDDDDIGKEV VTRLTTNMATNKIFYTDSNGRDFLERVRNHRDDWDLNLSQPVAGNYYPVNQGIYVADGKY ELSVLVDHAVGASSIQDGQIEVMLHRRLSADDGRGVGEPLNEVVCVDQKCDGLVARATYY INVNKKGHGAHWRRTYSQQVYSPFLVAFAHEDERSWKSNNIAKASTVEGNYSLPDNVAII TLQSLDDGTTLLRLAHLFQAQEDTQYSVMAKVELRKLFGKRIIKDLTETSLSANQKKSEM KKLNWRVTGESKTDPAPLKGGPVDSHALVVELGPMEIRTFLLKF

Transcript Sequence

Transcript ID	Os10t0140200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:2477209:2489739:1 gene:Os10g0140200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 38 domain containing protein. (Os10t0140200-01)
Sequence	GGTTCAAAGGAAAATTCACATAGGACCATATCCTGCAGTCCCTGTTGATCCATCCTGCCA CCGATCTTGTCTCTTCTCCGGCCGCCGGGCCGCCCTCCGCTTTGGACCTTCCGGCCACCG GCCTCCGTCCCGTGACCTCCTCCTCATCCTCATCCTCCTCGTGGAAACCACCACCCCCAT CTTCTGATGCTTCCTCCTAGTTTCTAACGCATCGATCACTTCCGACACGACATGGCGTCG TCGTCGTCGGCGCTGGTGGTGGTGGTGGCGGTTCTTGCGTTGGCGGAGGCGGCGGTGGCG TTCTCGGGGTACAACACGAGCGCCGGGGCGGTGGCCGGGAAGCTGAACGTGCACCTGGTG CCGCACTCCCACGACGACGTCGGGTGGCTCAAGACCATCGACCAGTACTTCGTCGGCACC AACAACTCCATCCAGGGCGCGTGCGTGATGAACACGCTCGACTCCGTGGTGGACGCGCTC ATCCTGGACCCCGCGCGCAAGTTCGTCTTCGCAGAGCAGGCTTTCTTCCAAAGATGGTGG GCAGAGAAAAGCCCAAAAATCCAGGCCATAGTCCACAAGCTAGTTGATTCTGGTCAGCTA GAGTTCATAAATGGTGGGTGGTGTATGCATGATGAAGCCGCCGTCCATTATATTGACATG ATTGATCAGACCACACTTGGTCATCGGGTAATCAAGAAACAGTTTAACAAGATCCCAAGA GCTGGCTGGCAAATTGATCCTTTTGGTCATTCTGCAGTTCAAGGTTATTTGCTTGGGGCA GAGCTTGGTTTCGATTCTATGCATTTTGCGAGAATCGATTACCAAGATAGAGCAAAGCGT AAAGGAGACAAAGGCCTAGAGGTTATATGGCGCGGCTCAAGAACATTTGGTTCATCTTCT CAGATCTTCACAAATGCATTTCCTGTCCATTATAGCCCTCCAGATGGCTTCGGCTTCGAA ATTTTCGATGATTTTGTACCTGTACAGGATGACATGTTGCTGTTTGACTACAATCTTAAA GAACGTGTGAATGATTTTGTTGCTGCAGCCTTAAAACAGGCAAATGTTACGCGCACAAAC CACATAATGTGGACTATGGGGGACGATTTTAATTACCAGTATGCTGAGTCTTGGTTCCGG AACATGGACAGGCTTATCAATTATGTGAACAAGGATGGCCGTGTGCATGCACTGTACTCT ACTCCATCTATTTACACAGATGCAAAACATGCGTCGAATGAATCATGGCCACTCAAATAC GATGATTATTTCCCGTATGCTGATGCAAAAAATGCTTACTGGACTGGATATTTTACAAGC CGTCCAACTTTCAAGCGATATATTCGAATGATCAGTGGATATTACCTGGCTGCGCGTCAA TTGGAATTTTTGGTGGGTAGAAGTTCCTTAGGATTGTTTACTTCTAGCTTGGAAGATCCA CTGGGGATTGCCCAACATCATGATGCAGTCTCAGGAACGGCAAAGCAACACACAACTGAT GATTATTCGAAACGCCTTGCGATTGGGGTTTCTCAGGTTGAGAAAGGTGTTAATACTGCT CTAAGTTGTCTCACAAGTTCCAAAGGAACATGTACAGCAACAAAATTTAGTCAGTGCCAA CTTCTCAATATTAGCTACTGCCCTTCAACTGAGGAAGGAATTTCATCCGCAAAGAGTTTA GTTATAGTTGTTTATAATCCTCTTGGATGGGAACGTAGTGACTTTGTAAGAGTTCCAGTA AATGATGCCAACTTAATTGTAAAAACCTCTGATGGAACTTCTCTGGAGTCACAACTAGTT GAAGTTGATATCGTGACAGCACGTTTAAGGAAGTTATACATAAAGGCTTATCTTGGAATC ACGTCCGATAAACCCCCAAAGTATTGGCTAGTTTTTCAAGCTTCTGTACCACCACTCGGC TGGAACACCTACTTCATATCAAAATCTACTGGAACAGGATCTAATGGAATGGGGTATGTC TCAACCATGGTTTCTCCAAGTAATGACACAATAGAAATTGGACCAGGGCCTCTGAAGATG TCCTATTCATCAAAATCTGGACAACTCAAGAGAATGTTCAATTCTATCTCTGCAGTGGAT TTGCCAATTCAACAGAGCTTTCTTTGGTATGCTTCAAGCACGGGAGATTCTGAAGATTCA CAGGCATCCGGAGCATATATTTTCAGACCAAATAGGACTACACCGACTATAGTTTCAGGA ATGGCGCCATTGAAAGTTATCCATGGACCTCTTGTTGACGAAGTCCACCAACAGTTCAGC TCATGGATTTATCAGGTCACGAGACTCTACAAGAATAAGGAGCACGCTGAAGTTGAATAT ACTATTGGACCAATACCTGTTGATGATGATGATGACATAGGAAAGGAGGTTGTTACCAGA CTGACAACAAATATGGCCACCAACAAAATATTTTATACAGATTCTAATGGAAGAGATTTC CTCGAAAGGGTGAGAAACCACAGGGATGATTGGGACCTTAATTTGTCTCAACCTGTTGCA GGAAATTACTACCCGGTCAATCAAGGAATATATGTAGCAGATGGGAAATATGAACTATCT GTCCTTGTGGATCATGCTGTTGGAGCTTCGAGTATTCAAGATGGTCAGATTGAAGTTATG CTCCACAGGCGTCTTTCTGCAGACGATGGCAGAGGAGTTGGGGAACCACTTAATGAAGTA GTATGTGTGGATCAAAAGTGCGATGGGCTAGTGGCCAGGGCAACTTACTATATCAATGTC AATAAGAAAGGACATGGAGCTCATTGGCGCCGAACATATAGCCAACAAGTTTATTCACCG TTCCTTGTTGCTTTTGCACATGAGGACGAACGCAGTTGGAAATCCAACAATATTGCAAAA GCAAGTACGGTAGAAGGAAACTATAGTCTTCCTGATAATGTTGCAATCATCACCTTGCAG AGTCTTGATGATGGCACCACACTCCTTCGATTGGCGCATCTTTTTCAGGCTCAAGAGGAC ACACAATATTCAGTAATGGCAAAGGTTGAATTGAGAAAGCTGTTTGGAAAGAGGATAATC AAAGATTTGACTGAGACTAGCCTATCTGCAAACCAAAAGAAGTCAGAGATGAAGAAGCTC AATTGGAGAGTAACCGGGGAGAGCAAAACTGATCCTGCACCATTGAAGGGTGGCCCAGTT GACAGCCACGCCCTTGTTGTTGAGCTTGGACCGATGGAGATACGCACATTCTTGCTGAAA TTCTGAACTGCGGTTGTTTTGGCCTTTTATTCTTCTCTCTTTTGCTGTGAGGGAAAGGCT TAATTTGGATAGTTGCCTGGATTTATCTGAGGATGATGTTGCTGTCGGTAACTGGTAATA AGAGAATAATAAGTGCTTCCAGCAAATGAAATAAAGGAAAATATTCTTGTTGC