Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0139300-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:2422073:2426565:-1 gene:Os10g0139300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Paternally Expressed Gene2 description:F-box domain containing protein, Regulation of seed development (Os10t0139300-01)
Sequence	ATGGGCGCCGCGATCAGCTGCTGTGGCTGTCCTCCTCGCCGCCGTGCAGGCGCGGCCGAC GACGCGGCGGCGGGACTCACCGACGACATCCTCGCCGAGATCTTCCTCCGGCTGCCGCCG CACCCGGCCTGCCTCCGCCGCGTCTCCCTCGTCAGCCGCCGGTTCCGCCGCGTGGTCACC AGCCGCCGCTTCCTCCGCCGGTTCAGCGACCTCCACGGCGGCGCGCCGGGGGCTCCCCTC GTCGGCTTCTTCAGCAACCACAACCATGGCCCCTGGGCGGACACCCGCTTCATCCCTGTC GGCGTCGACGGCACCGGGGACAGCCGTCGGAGCCGCTGCCGCAGCCGCCGCGCCACCGCG GCGCGTAATCCCGGCGGGGTGCTCGCCCTGGGCGACGACGCCGAGTGGCACGTCATCGGC TGCCGCGGCGGGCGCGTCCTCCTCCTCAGCCCCACGCGGCTCCGCCTCCTGGTGCTGGAG CCCATGCTCGGCCGCCGCCAGTACATCCCGGCGCCGCCGGCGCCGGAGTACAGGCCGGCA TACTTCAGCAACGCCGCCGTGGTCTCCGCCGCGGGGGGCCACGACGAGCTCCGCCTCCGG CCGCACCTGTTCCGCGTGGTGTTCGTCTCGAGCAACGCCGCCACCAAGCGCTCCACCGCC TTCGTCTACAACTCGGCGACGTTCCGGTGGACCAAGGCGGCGGCGACAGAGATGTCGTCG GTGATCGACGGCCGGCCGAGCGTCCTGATCGGCCAGACCCTCTACTGGCACCTCATCTCG CACGGCCTCGTCGCGTTCAACCTGGAGACGCACGAGCTGCACGAGATCCTGGTGCCGGCC GACGCGTTCGACGACGTGCACGATGCCAACCTGAGCATCGTCGTCCCCAGGAGCGGCGGC GGCGGAGTCGGCCTCGCCGCGGTGTCCGGGTACATCCTCCAGCTCTGGACGCTGCGCGAC TACACCCACGGCGCGTCCACCTGGGACCTGCGCAACATCGTGGTGCTGGACGCGCTGCTC CCCCTGCGCAACGCTCGGCTGCCGCCGCCGCCGCAGCTGCCGGCGTCGGCGAAGCCGATG CCTCTGGTGTGGTTGATGGCGCTGGACGAGGATGAGAACGTGGGGTACGTGTGGACCGCG GCTGGGGTGTTCGCTGTTCAGCTTGACACCATGAATTACCACAAGGTGCTTGGACCTGTT TGTAGGGGGATGCAATTCGTTTTTCCCTACAAAAGCTTCTTTCTCCCTCAAGGTGGAAGT GCAGCCATGATTATGTAA

Peptide Sequence

PEP ID	Os10t0139300-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:2422073:2426565:-1 gene:Os10g0139300 transcript:Os10t0139300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Paternally Expressed Gene2 description:F-box domain containing protein, Regulation of seed development (Os10t0139300-01)
Sequence	MGAAISCCGCPPRRRAGAADDAAAGLTDDILAEIFLRLPPHPACLRRVSLVSRRFRRVVT SRRFLRRFSDLHGGAPGAPLVGFFSNHNHGPWADTRFIPVGVDGTGDSRRSRCRSRRATA ARNPGGVLALGDDAEWHVIGCRGGRVLLLSPTRLRLLVLEPMLGRRQYIPAPPAPEYRPA YFSNAAVVSAAGGHDELRLRPHLFRVVFVSSNAATKRSTAFVYNSATFRWTKAAATEMSS VIDGRPSVLIGQTLYWHLISHGLVAFNLETHELHEILVPADAFDDVHDANLSIVVPRSGG GGVGLAAVSGYILQLWTLRDYTHGASTWDLRNIVVLDALLPLRNARLPPPPQLPASAKPM PLVWLMALDEDENVGYVWTAAGVFAVQLDTMNYHKVLGPVCRGMQFVFPYKSFFLPQGGS AAMIM

Transcript Sequence

Transcript ID	Os10t0139300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:2422073:2426565:-1 gene:Os10g0139300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Paternally Expressed Gene2 description:F-box domain containing protein, Regulation of seed development (Os10t0139300-01)
Sequence	AGTGTGAGCAGCAGCTTCATCACACCGAGCTCGCAAAAAACACAATCAATCGATCCCCAA TTCGATCCCCATGGGCGCCGCGATCAGCTGCTGTGGCTGTCCTCCTCGCCGCCGTGCAGG CGCGGCCGACGACGCGGCGGCGGGACTCACCGACGACATCCTCGCCGAGATCTTCCTCCG GCTGCCGCCGCACCCGGCCTGCCTCCGCCGCGTCTCCCTCGTCAGCCGCCGGTTCCGCCG CGTGGTCACCAGCCGCCGCTTCCTCCGCCGGTTCAGCGACCTCCACGGCGGCGCGCCGGG GGCTCCCCTCGTCGGCTTCTTCAGCAACCACAACCATGGCCCCTGGGCGGACACCCGCTT CATCCCTGTCGGCGTCGACGGCACCGGGGACAGCCGTCGGAGCCGCTGCCGCAGCCGCCG CGCCACCGCGGCGCGTAATCCCGGCGGGGTGCTCGCCCTGGGCGACGACGCCGAGTGGCA CGTCATCGGCTGCCGCGGCGGGCGCGTCCTCCTCCTCAGCCCCACGCGGCTCCGCCTCCT GGTGCTGGAGCCCATGCTCGGCCGCCGCCAGTACATCCCGGCGCCGCCGGCGCCGGAGTA CAGGCCGGCATACTTCAGCAACGCCGCCGTGGTCTCCGCCGCGGGGGGCCACGACGAGCT CCGCCTCCGGCCGCACCTGTTCCGCGTGGTGTTCGTCTCGAGCAACGCCGCCACCAAGCG CTCCACCGCCTTCGTCTACAACTCGGCGACGTTCCGGTGGACCAAGGCGGCGGCGACAGA GATGTCGTCGGTGATCGACGGCCGGCCGAGCGTCCTGATCGGCCAGACCCTCTACTGGCA CCTCATCTCGCACGGCCTCGTCGCGTTCAACCTGGAGACGCACGAGCTGCACGAGATCCT GGTGCCGGCCGACGCGTTCGACGACGTGCACGATGCCAACCTGAGCATCGTCGTCCCCAG GAGCGGCGGCGGCGGAGTCGGCCTCGCCGCGGTGTCCGGGTACATCCTCCAGCTCTGGAC GCTGCGCGACTACACCCACGGCGCGTCCACCTGGGACCTGCGCAACATCGTGGTGCTGGA CGCGCTGCTCCCCCTGCGCAACGCTCGGCTGCCGCCGCCGCCGCAGCTGCCGGCGTCGGC GAAGCCGATGCCTCTGGTGTGGTTGATGGCGCTGGACGAGGATGAGAACGTGGGGTACGT GTGGACCGCGGCTGGGGTGTTCGCTGTTCAGCTTGACACCATGAATTACCACAAGGTGCT TGGACCTGTTTGTAGGGGGATGCAATTCGTTTTTCCCTACAAAAGCTTCTTTCTCCCTCA AGGTGGAAGTGCAGCCATGATTATGTAATTCTACTCCTTCCTGGGAAAAGTGGCAATGGC AAGGTGATGACGTGAGAATAACCGAGATTTTGCTCATTAAGCTAATATATAATAGGCTGG CTGAAAACTCTCGGAATTAGATGATTTATTTAAAGTAATTTGTTGTTGTTTGATGAGACC TTAATTAATTATAGTAAGATGCACTTTTCTGTAATTAACATGTGTGCTTCGGTATTTGCT TCTGC