Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0138300-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:2374615:2378634:1 gene:Os10g0138300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0138300-01)
Sequence

ATGGCTGAGTTGCCGCCGGTGCAGATCGTCGCAGCCAAGGACGACGTCCCGCCGCCGTAC
CTGACCGACAACGTCGTCCACAACCTGCTGCTCTGCCTGGCGCCGGAGCCGGCATACCTC
GCCGTGGCGACGGCCGTGTCCACCAAGTGGCGGAGCGTCGTCCACAGCGAGGCCTGCTTC
GGCCGCCGCTTCCGCCTGGACTACGACGGGCCGACGCCGCTGCTCGGCTTCTTCTCCAAC
AACGCCGCGGGGCCGTTCTTCACCGCCACCGGCGCCGGCGTGGTGGGCCTGGCGCCGCCG
GAGGAGGCCGTCTCGGCCGGCGACGGCAGCGTGCAGCACATCTACGACGCGCGCCACGGC
CGCGTCCTGATGGACGGCCGGGAGGACAAGGAGCTCCTCGTCTGGGACCCTCTGTCCCGC
CGCAAGGACTTCATCCCCATGCCGCCCGGCTACTTCGTCGGAGAGGGCTACGGCGGCGGC
GCGTTGATCTGCGAAGCCGACCACGGCGCCGGCGACGACTGCCATGCCGCGCCGTACCGC
GTCGTATTCGTGTACTGCGGCTCGGATCGGCCCCCCACCACCATGGCTAGCGTGTACAGC
TCCAGGACCAACACCTGGGGCCCCGTGGCCACCATGGATGCTCGCGTCACTTTCGAGCTC
AAGCAACCCGCTGTGCTCGACTATACCGTCTACTGGTTGGTAAATGGGAGGACCCAAATC
ATTGAGTTCGAGTTCGATACCAACAGCCTAGCACTATTCAGAACACCGGTGGATCTCCCG
GACATCGTCGTCTTCCCCATGGAAGACGGGCGGCTAGGCTACACTGGTATGATGGGCCCA
ATCGTCAGGGTTTTCGCCATCGAAGATATCTATGAAGACGGTGATGCCACCTGGACAAAA
GTTACTACTCTTCATCTAGATGCTATGCGGCCAAGCCAGTCATATCAGCAAGTTCTTGAT
TCGGACACAGACTCTGACTCCGATGATGAGGAGGAGGTTGTATTATTGTTGGCACATCAG
TTTGGTCCCAAGGCGAAGAAGGATAGCAAAATCATTCCCTCGCACCCGCCAACTATTAAG
AGTGATAACGACGAATATAACCATGTCGTGATCAGGCCAAGAGTTATCGGGTTCATAGAG
GATCCTAACTCAATCTTAGTTCGAAATGAGCTAGGTGTATTCATGGTTGATATTGAATCA
AACGAATACGAGCAGTTATCTCAGAGGATCTACTTCACCACTGTCTACCCTTACGAGAGC
TTCTACACCACAGTTGGCAAAGCAAATTTCAATGATCCGGTGCTGATTGATCATGAGAAC
AACGATGAACAAGGTTTACAACAGCTTGAACCCCTCAATGATACAATACTTCCAGATCAG
GAGAACATTGGTGGAGGGATTAGTGCTTCAGGTGATGGAGACGAGCAGTAA

Peptide Sequence

PEP ID

Os10t0138300-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:2374615:2378634:1 gene:Os10g0138300 transcript:Os10t0138300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0138300-01)
Sequence

MAELPPVQIVAAKDDVPPPYLTDNVVHNLLLCLAPEPAYLAVATAVSTKWRSVVHSEACF
GRRFRLDYDGPTPLLGFFSNNAAGPFFTATGAGVVGLAPPEEAVSAGDGSVQHIYDARHG
RVLMDGREDKELLVWDPLSRRKDFIPMPPGYFVGEGYGGGALICEADHGAGDDCHAAPYR
VVFVYCGSDRPPTTMASVYSSRTNTWGPVATMDARVTFELKQPAVLDYTVYWLVNGRTQI
IEFEFDTNSLALFRTPVDLPDIVVFPMEDGRLGYTGMMGPIVRVFAIEDIYEDGDATWTK
VTTLHLDAMRPSQSYQQVLDSDTDSDSDDEEEVVLLLAHQFGPKAKKDSKIIPSHPPTIK
SDNDEYNHVVIRPRVIGFIEDPNSILVRNELGVFMVDIESNEYEQLSQRIYFTTVYPYES
FYTTVGKANFNDPVLIDHENNDEQGLQQLEPLNDTILPDQENIGGGISASGDGDEQ

Transcript Sequence

Transcript ID

Os10t0138300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:2374615:2378634:1 gene:Os10g0138300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0138300-01)
Sequence

GATTTCCAAGCCCTAGCACTACACTCACTCACCTACCCCGAGACATGGCTGAGTTGCCGC
CGGTGCAGATCGTCGCAGCCAAGGACGACGTCCCGCCGCCGTACCTGACCGACAACGTCG
TCCACAACCTGCTGCTCTGCCTGGCGCCGGAGCCGGCATACCTCGCCGTGGCGACGGCCG
TGTCCACCAAGTGGCGGAGCGTCGTCCACAGCGAGGCCTGCTTCGGCCGCCGCTTCCGCC
TGGACTACGACGGGCCGACGCCGCTGCTCGGCTTCTTCTCCAACAACGCCGCGGGGCCGT
TCTTCACCGCCACCGGCGCCGGCGTGGTGGGCCTGGCGCCGCCGGAGGAGGCCGTCTCGG
CCGGCGACGGCAGCGTGCAGCACATCTACGACGCGCGCCACGGCCGCGTCCTGATGGACG
GCCGGGAGGACAAGGAGCTCCTCGTCTGGGACCCTCTGTCCCGCCGCAAGGACTTCATCC
CCATGCCGCCCGGCTACTTCGTCGGAGAGGGCTACGGCGGCGGCGCGTTGATCTGCGAAG
CCGACCACGGCGCCGGCGACGACTGCCATGCCGCGCCGTACCGCGTCGTATTCGTGTACT
GCGGCTCGGATCGGCCCCCCACCACCATGGCTAGCGTGTACAGCTCCAGGACCAACACCT
GGGGCCCCGTGGCCACCATGGATGCTCGCGTCACTTTCGAGCTCAAGCAACCCGCTGTGC
TCGACTATACCGTCTACTGGTTGGTAAATGGGAGGACCCAAATCATTGAGTTCGAGTTCG
ATACCAACAGCCTAGCACTATTCAGAACACCGGTGGATCTCCCGGACATCGTCGTCTTCC
CCATGGAAGACGGGCGGCTAGGCTACACTGGTATGATGGGCCCAATCGTCAGGGTTTTCG
CCATCGAAGATATCTATGAAGACGGTGATGCCACCTGGACAAAAGTTACTACTCTTCATC
TAGATGCTATGCGGCCAAGCCAGTCATATCAGCAAGTTCTTGATTCGGACACAGACTCTG
ACTCCGATGATGAGGAGGAGGTTGTATTATTGTTGGCACATCAGTTTGGTCCCAAGGCGA
AGAAGGATAGCAAAATCATTCCCTCGCACCCGCCAACTATTAAGAGTGATAACGACGAAT
ATAACCATGTCGTGATCAGGCCAAGAGTTATCGGGTTCATAGAGGATCCTAACTCAATCT
TAGTTCGAAATGAGCTAGGTGTATTCATGGTTGATATTGAATCAAACGAATACGAGCAGT
TATCTCAGAGGATCTACTTCACCACTGTCTACCCTTACGAGAGCTTCTACACCACAGTTG
GCAAAGCAAATTTCAATGATCCGGTGCTGATTGATCATGAGAACAACGATGAACAAGGTT
TACAACAGCTTGAACCCCTCAATGATACAATACTTCCAGATCAGGAGAACATTGGTGGAG
GGATTAGTGCTTCAGGTGATGGAGACGAGCAGTAAACAGGTCTTTCTGTTACCTCATCAG
TTCAAGTGGCATCAAGATTGGGCGTACATTGAAGATTTCTTGGTCGGCAGCTAGCTACTA
TAATAATCAGGCTATCGCACATTCAGTCAGATTCTCAGATGTGCTGTAAACTTGTTAATT
TAATTAATAAACCCATGTCATGTGTTTGTTGTTTACCTGCATTAATTTTCGTATGTGTAC
TTGCCCCTGCAACAACTGGTGCTGCGCCGTTCAAATCTTCAGCTAGTATAAGTTTAGACG
ACAGCAGGGATATATGTGAAATCAATGTTTTGATT