Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0136500-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:2257492:2262619:1 gene:Os10g0136500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SRK5 protein (Fragment). (Os10t0136500-01)
Sequence	ATGGACATCGTCGTCGGCGTCCTGCTCATACTGGGCCTCATGCCGATGCCGTTCGAGGTC ATCATGGCCGCCGCCGACGATGGTGGCGGCGTGTTCTGCGACAACCTCAAGTTCGTGTCC GCAACCCTCCCCAACAAAACCTCCTCCTCCCCGCACCACTACGCCACCGCCGCCGCCGGC CAAGCCCCCGACGTGGTCTACGTCCTCGCGCTCTGCCGCGGCGACCTCAACGACACAGCT TGCGGCGAATCCGTCGCCTACACGTTCGCGAGACTGATCAACGAGTCGTGCGTCGCCAAC TACACGGCCGGGGCTTACTACGGCGACTGCACCGGCGTCTACTCCTTCCAGAACTTTCTC GATCCTTCCGACGCCACAGAAGACGAGGAGCCCTTCGAGAGGTGGAACGTCAACAACATC ACCGGCGACGGCGAGAACGTGCGGTTCATCGCCGGCCTCATCCAACAGCTTCTGTCGGAA ACGGTGGAGAGGGCGGCCGGCGCCGCGGGGCGGTTTGCGACGGGCGTCGTGGACACCGGC AGGACGTTCCCGCTGGTGTACTCGCTGGCGCAATGCACGCCGGACCTGTCCGCCGGCGAC TGCCTGGCGTGCCTCCGCCGCCTCACCGGCATGATCAACTCCACCATGGCCGTGCGCATG GGTGCGCAGATACATGTCACACGGTGCTACTTCAGGTATGAGGCGTACGTGTTCTACGAC AGCAAGCCTATGCTGCATCTCACCGGCGCGCCGGCTCCGGCCATCCCCAAAAGGCATAAG AGCAAGCTCTGGGTAATTCCCATTGTCATAATTCCTGTGGTGGCATTTTTCTGCTTCATT GTTTACTGCGGCTGGCGGAGGGGGCACAGAAAAGGTATAATGGGATTACAAGCAAGGAGA ACTGATAACTTGCAGGGAGAGGAAGAATTAGTTTGGGACCTAGAAGGAAAAAATCCAGAG TTTTCAGTATTTGAGTTTGATCAGGTACTGGAGGCTACAAGTAATTTTTCTGAAGTAAAC AAGCTTGGAGAAGGTGGCTTTGGCGCCGTGTACAAGGGCCATTTTCCTGATGGAATAGAG ATAGCAGTCAAGAGACTTGCTTCACATTCAGGACAAGGTTTCATAGAGTTCAAAAATGAA GTCCAGCTCATAGCCAAACTACAGCACAGGAATTTGGTTAGGCTCTTGGGGTGTTGCTCT CATGAAGAGGAGAAAATTTTGGTCTATGAATTCTTGCCAAACAAAAGCTTGGACTTATTT ATCTTTGATGAAAATAAAAGAGCTTTGCTGGATTGGTACAAACGTCTAGAAATAATTGAA GGAATAGCACATGGACTTCTTTACCTACATAAGCACTCCCGATTGAGTGTCATACATCGA GATCTTAAACCGAGTAACATTCTCTTGGATAGCGAAATGAACCCTAAAATTTCAGACTTT GGGTTAGCAAGAATATTTAGCTCAAATAACACAGAAGGAAACACAACAAGAAGAGTGGTT GGTACATACGGCTACATGGCTCCGGAGTATGCTTCTGTGGGCCTCTTCTCTATCAAATCC GACGTATTCAGCTTTGGTGTTCTATTTCTTGAGATTATCAGTGGAAAAAAGAATTCTGGT TCCCATCATAGTGGAGACTTTATCAATCTCCTTGGATTTGCATGGTCACTATGGGGAGAG GGAAGATGGCTTGAACTCATCGATGAATCATTAGTTTCCAAATATCCTCCTGCAGAAAAT GAAATCATGAGGTGCATTAACATAGCATTGCTGTGTGTACAAGAGAATGCAGCTGATCGA CCAACCATGTCAGATGTTGTTGCAATGCTAAGCAGCAAGACGATGGTCCTGGCTGAACCT AAGCACCCGGGATATTTCAATGTGAGAGTGGCAAATGAAGAGCAATCTGTTCTTACTGAG CCATGTAGTGTTAATGATATGACCATATCTGCCATAAGTGCTAGATAG

Peptide Sequence

PEP ID	Os10t0136500-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:2257492:2262619:1 gene:Os10g0136500 transcript:Os10t0136500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SRK5 protein (Fragment). (Os10t0136500-01)
Sequence	MDIVVGVLLILGLMPMPFEVIMAAADDGGGVFCDNLKFVSATLPNKTSSSPHHYATAAAG QAPDVVYVLALCRGDLNDTACGESVAYTFARLINESCVANYTAGAYYGDCTGVYSFQNFL DPSDATEDEEPFERWNVNNITGDGENVRFIAGLIQQLLSETVERAAGAAGRFATGVVDTG RTFPLVYSLAQCTPDLSAGDCLACLRRLTGMINSTMAVRMGAQIHVTRCYFRYEAYVFYD SKPMLHLTGAPAPAIPKRHKSKLWVIPIVIIPVVAFFCFIVYCGWRRGHRKGIMGLQARR TDNLQGEEELVWDLEGKNPEFSVFEFDQVLEATSNFSEVNKLGEGGFGAVYKGHFPDGIE IAVKRLASHSGQGFIEFKNEVQLIAKLQHRNLVRLLGCCSHEEEKILVYEFLPNKSLDLF IFDENKRALLDWYKRLEIIEGIAHGLLYLHKHSRLSVIHRDLKPSNILLDSEMNPKISDF GLARIFSSNNTEGNTTRRVVGTYGYMAPEYASVGLFSIKSDVFSFGVLFLEIISGKKNSG SHHSGDFINLLGFAWSLWGEGRWLELIDESLVSKYPPAENEIMRCINIALLCVQENAADR PTMSDVVAMLSSKTMVLAEPKHPGYFNVRVANEEQSVLTEPCSVNDMTISAISAR

Transcript Sequence

Transcript ID	Os10t0136500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:2257492:2262619:1 gene:Os10g0136500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SRK5 protein (Fragment). (Os10t0136500-01)
Sequence	CTGCGAGGCAGTTAGCTAGCTTAGACGCCATGGACATCGTCGTCGGCGTCCTGCTCATAC TGGGCCTCATGCCGATGCCGTTCGAGGTCATCATGGCCGCCGCCGACGATGGTGGCGGCG TGTTCTGCGACAACCTCAAGTTCGTGTCCGCAACCCTCCCCAACAAAACCTCCTCCTCCC CGCACCACTACGCCACCGCCGCCGCCGGCCAAGCCCCCGACGTGGTCTACGTCCTCGCGC TCTGCCGCGGCGACCTCAACGACACAGCTTGCGGCGAATCCGTCGCCTACACGTTCGCGA GACTGATCAACGAGTCGTGCGTCGCCAACTACACGGCCGGGGCTTACTACGGCGACTGCA CCGGCGTCTACTCCTTCCAGAACTTTCTCGATCCTTCCGACGCCACAGAAGACGAGGAGC CCTTCGAGAGGTGGAACGTCAACAACATCACCGGCGACGGCGAGAACGTGCGGTTCATCG CCGGCCTCATCCAACAGCTTCTGTCGGAAACGGTGGAGAGGGCGGCCGGCGCCGCGGGGC GGTTTGCGACGGGCGTCGTGGACACCGGCAGGACGTTCCCGCTGGTGTACTCGCTGGCGC AATGCACGCCGGACCTGTCCGCCGGCGACTGCCTGGCGTGCCTCCGCCGCCTCACCGGCA TGATCAACTCCACCATGGCCGTGCGCATGGGTGCGCAGATACATGTCACACGGTGCTACT TCAGGTATGAGGCGTACGTGTTCTACGACAGCAAGCCTATGCTGCATCTCACCGGCGCGC CGGCTCCGGCCATCCCCAAAAGGCATAAGAGCAAGCTCTGGGTAATTCCCATTGTCATAA TTCCTGTGGTGGCATTTTTCTGCTTCATTGTTTACTGCGGCTGGCGGAGGGGGCACAGAA AAGGTATAATGGGATTACAAGCAAGGAGAACTGATAACTTGCAGGGAGAGGAAGAATTAG TTTGGGACCTAGAAGGAAAAAATCCAGAGTTTTCAGTATTTGAGTTTGATCAGGTACTGG AGGCTACAAGTAATTTTTCTGAAGTAAACAAGCTTGGAGAAGGTGGCTTTGGCGCCGTGT ACAAGGGCCATTTTCCTGATGGAATAGAGATAGCAGTCAAGAGACTTGCTTCACATTCAG GACAAGGTTTCATAGAGTTCAAAAATGAAGTCCAGCTCATAGCCAAACTACAGCACAGGA ATTTGGTTAGGCTCTTGGGGTGTTGCTCTCATGAAGAGGAGAAAATTTTGGTCTATGAAT TCTTGCCAAACAAAAGCTTGGACTTATTTATCTTTGATGAAAATAAAAGAGCTTTGCTGG ATTGGTACAAACGTCTAGAAATAATTGAAGGAATAGCACATGGACTTCTTTACCTACATA AGCACTCCCGATTGAGTGTCATACATCGAGATCTTAAACCGAGTAACATTCTCTTGGATA GCGAAATGAACCCTAAAATTTCAGACTTTGGGTTAGCAAGAATATTTAGCTCAAATAACA CAGAAGGAAACACAACAAGAAGAGTGGTTGGTACATACGGCTACATGGCTCCGGAGTATG CTTCTGTGGGCCTCTTCTCTATCAAATCCGACGTATTCAGCTTTGGTGTTCTATTTCTTG AGATTATCAGTGGAAAAAAGAATTCTGGTTCCCATCATAGTGGAGACTTTATCAATCTCC TTGGATTTGCATGGTCACTATGGGGAGAGGGAAGATGGCTTGAACTCATCGATGAATCAT TAGTTTCCAAATATCCTCCTGCAGAAAATGAAATCATGAGGTGCATTAACATAGCATTGC TGTGTGTACAAGAGAATGCAGCTGATCGACCAACCATGTCAGATGTTGTTGCAATGCTAA GCAGCAAGACGATGGTCCTGGCTGAACCTAAGCACCCGGGATATTTCAATGTGAGAGTGG CAAATGAAGAGCAATCTGTTCTTACTGAGCCATGTAGTGTTAATGATATGACCATATCTG CCATAAGTGCTAGATAGTTTATTCTTCATGTGTCATGTGGCTTTCGTTGATCCAATGTAC GTAGTATTTGAAGATATCATAACAGAATTATAATGCTGTGGTATTTCAGGTGTCGGAGTA TGTACTCCCCAAAGAGTGATCCTAGATTTTTGTATACAAACAAATGGCTTTTGTATTTAT TTGGTGGGTAGCAAATCAATACCATAACTATCGTTGGTGCC