Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0131200-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:1913330:1915825:1 gene:Os10g0131200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0131200-01)
Sequence

ATGGCCTCGGTCCCAAGTGACTTGGCCTCTCGCCCTGACCTGGGTAGCTGCATGGTGGCG
GCGACAAGTGAAATGGAACGTCTGAAGCAGCTCTTCACGGCAAGATCGGTGGTGGCCTGG
TCTGATGAAGGCCAGAAGGTGGAGATCGGCACATTTGCTGATGACATCCGTTCGGCCTTC
CGTATCCATCGCTCCGACATTCAGATCACGAAGTTCTATCCAGAAGACTTCTTCCTCACT
TTTGTTAACCATAGCGATCGTGAGGAAGTGCTGCAAGAGCCAAGGCTGGTAACTCGAAGT
GGGAGAGTGTATCACTTCAAGCCATGGAATGAAAGGCGCAATGCTGAAGTAATTGATGTT
CGCTTCCATGCCCGAGTCTGCATTGAAGGTATCCCAATGCATGCAAGATCAGAAGAAGTG
GCGACAAAGATCATTGGCTGCAAGAGTTCAGTCCACTACATAGAAGAGTACTCCCGTCGC
CGGAACTACAACCGTACCTTTGATCTTTGGATTTGGAGCTCAGACTTGAGCAGCTCCATC
CTGAAGGCTTCAAGTTTCTCTATCACAAGGCCAGACAGTGAAGCAAGAGCCACTGATGTT
CCTTTTCCTGAGTTGGAGCCGCCCCGGATGCCGGGCATTCTTCCGCAGTTGTTTCTCCTC
TTCCCCAACCTCTCTCACCTGATCTGTTGCCCGTGTCACAGGATCAGAGGGCTTTGCTCT
TGCTTGAAAGACACCTGGATCCTATGTTCTATGAGGCCACGATGGGAGGTTCCATCTACT
CCCCTGATACTTCCCTGCCTCGTACTGCCTCTCCTGTGTTTGTTCTTTCAGCTGCTGCAG
ACTCACAGGCGACACCAGTTGAGGTGA

Peptide Sequence

PEP ID

Os10t0131200-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:1913330:1915825:1 gene:Os10g0131200 transcript:Os10t0131200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0131200-01)
Sequence

MASVPSDLASRPDLGSCMVAATSEMERLKQLFTARSVVAWSDEGQKVEIGTFADDIRSAF
RIHRSDIQITKFYPEDFFLTFVNHSDREEVLQEPRLVTRSGRVYHFKPWNERRNAEVIDV
RFHARVCIEGIPMHARSEEVATKIIGCKSSVHYIEEYSRRRNYNRTFDLWIWSSDLSSSI
LKASSFSITRPDSEARATDVPFPELEPPRMPGILPQLFLLFPNLSHLICCPCHRIRGLCS
CLKDTWILCSMRPRWEVPSTPLILPCLVLPLLCLFFQLLQTHRRHQLR

Transcript Sequence

Transcript ID

Os10t0131200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:1913330:1915825:1 gene:Os10g0131200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0131200-01)
Sequence

AGTCCTTGAATGTTTCCCCACCAACCAATCTTCTCCAGTCTTCCTCCCTTCCATTCAAAG
CTCCCTCTGTCCACCTGAGGAGGGAGAAATCTTCGTAGACTCCCCCCTAGATCCAGGCTG
TTCTGAAGCTGGAGAAGAGATCCCCCATGGATCTAACCTCCATCTGCCCGTTTCTGCAAC
GGATGGGGATCGAGGTAAGGAGACCGGATCTATCTCAAAATCAATTTCAAATCTGCATTC
ATCCCAGCATATCCCCAAGCAGATCTCCAAGCAGATTTCAAATCCCCCCGCCGGCCCAAT
GTCTTCTCGGCCTCTTTACTCCGCCGTACTTCGACAAGATGGACATCCACCAGTAGCTCG
GCGCCTACCGATTGCAAATCACCTCAATCCCTCAATTCTTGGCCGCCCACCGCCTCCTCC
GTCTTCAAGAGTGTTGAGCAGTGGGAAAGTTGTTGATTTGACGAGACGCCATTACCACCC
CCCCTCTTTCCCGAAGCTGTGCTACTTCCAAGACTGAGAAAGAGCAGCCATGGCAAGAAG
TTAAGCAAAGGTTCTAGTGGAGGAAAGGATCCTCATTCAATTCTCCTAACAACCAAGAGA
TCATGGCTGCAAGAAAGATCCGATTCCTCAAGCACACAGAAGGTAAATGCTTCCGCTGCC
TCCAACCCGGTCATAAAGTTGCAGACTGCAGGGATCCTCTTCGTTGTTGGTTTTGCAGAA
GATTTGGTCACCTCTCCTCAGCCTGCAGAGAACGCCGCTATAAATTGCAACAACAAGTGC
AGTTTCATCCGCCATCCTAGCAACCATCTCCACCACCAGCGCCACCACTGCTTTCCTCCA
CAGTGTTCCCTCCTCTCAACAACCATCTGAACACTTCCTCTGCTCCTCCCACCATGGCCT
CGGTCCCAAGTGACTTGGCCTCTCGCCCTGACCTGGGTAGCTGCATGGTGGCGGCGACAA
GTGAAATGGAACGTCTGAAGCAGCTCTTCACGGCAAGATCGGTGGTGGCCTGGTCTGATG
AAGGCCAGAAGGTGGAGATCGGCACATTTGCTGATGACATCCGTTCGGCCTTCCGTATCC
ATCGCTCCGACATTCAGATCACGAAGTTCTATCCAGAAGACTTCTTCCTCACTTTTGTTA
ACCATAGCGATCGTGAGGAAGTGCTGCAAGAGCCAAGGCTGGTAACTCGAAGTGGGAGAG
TGTATCACTTCAAGCCATGGAATGAAAGGCGCAATGCTGAAGTAATTGATGTTCGCTTCC
ATGCCCGAGTCTGCATTGAAGGTATCCCAATGCATGCAAGATCAGAAGAAGTGGCGACAA
AGATCATTGGCTGCAAGAGTTCAGTCCACTACATAGAAGAGTACTCCCGTCGCCGGAACT
ACAACCGTACCTTTGATCTTTGGATTTGGAGCTCAGACTTGAGCAGCTCCATCCTGAAGG
CTTCAAGTTTCTCTATCACAAGGCCAGACAGTGAAGCAAGAGCCACTGATGTTCCTTTTC
CTGAGTTGGAGCCGCCCCGGATGCCGGGCATTCTTCCGCAGTTGTTTCTCCTCTTCCCCA
ACCTCTCTCACCTGATCTGTTGCCCGTGTCACAGGATCAGAGGGCTTTGCTCTTGCTTGA
AAGACACCTGGATCCTATGTTCTATGAGGCCACGATGGGAGGTTCCATCTACTCCCCTGA
TACTTCCCTGCCTCGTACTGCCTCTCCTGTGTTTGTTCTTTCAGCTGCTGCAGACTCACA
GGCGACACCAGTTGAGGTGACCCGGCATGATGTGGAGGAGTTCCTGGCGGAGGTGACCAC
ACCCATCCAGCAGCCACTCCTTCCTGCGCCAGGAACCAAGCCACGCCGCCCATGCTGCAA
CAAGCACTACAAGAAACTGCTCTCCCCAGCAGACATGAAGACAATCACGACACTGGTGGA
GAATGGAGGCTGCAAAGGCATTCGGCTGCGTGCCAAGAAGGCGGCATCGGTGGTGCCGAT
ATGAAGCCCCAACCGTGACAGAAGACTGCCGGCCAACTGTTGATGATGTTAAGTAGATGG
CTTTTGATGTTTGTAATGCAAATGTGCACCTCTTTGTGTTTCTGCCAAGTTTCTTGGCTG
TGTTTCAGAGATGGCCATTTGCATCACAAGTCCTCCCCTGCAGATGGAGTCTCCCCCAGT
AGTAATGACTTTTATTCATGTCGCAGTTGAACTGTTTCATCCTCAATTGGAATGTCAGAG
GCTTGAACAGCCAAGTTAGAAAAAAAAGTGTTAAGCTGTTGGTAGAGCAGATGAATGCTA
CAATAGTTTGTCTCCAAGAAACAAAGATGAATCAAATCTCTGATGTGGATGTTTTGC